| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is 50842461
Identifier: 50842461
GI number: 50842461
Start: 1060892
End: 1061860
Strand: Direct
Name: 50842461
Synonym: PPA0976
Alternate gene names: NA
Gene position: 1060892-1061860 (Clockwise)
Preceding gene: 50842460
Following gene: 50842462
Centisome position: 41.44
GC content: 59.44
Gene sequence:
>969_bases GTGACGCCGCTCTTTCTCGGCCTACCTGAGGTCAAGTCGCCGTGGGTGCCCTGGCTGTTGCTGCTCGTCCCGGTGCTGCT GGTCTTCTACATCTGGGCGTCGCATCGCAGCCGATCTACGGCGATGAGATTTACCAATACCGCCATCCTTGGCGCGGTGA TGAGTAAGCAGCCGCAGTGGAAGAGGCACATCGCCGTTGCTGCTGCTTTGCTATGCGTGGCAACTACCACTGTTGCATGG GCTCGGCCGATGGGTATCGAACAGGTGCCGCGCAACCGCGCCACTATCGTTGTTGCCATCGACTCATCTTTGTCGATGAA AGCTGACGACGTTTCCCCCACTCGTCTCGCCGCGGCCAAGGCCAAGGCCAAGGATTTCATCAATAGTCTTCCGACCGGAT TCAATGTCGCAGTGGTGAGCATTTCCGAGCATCCGGAGATTCGGATGCCACCGTCGACCGACCGGCCTACCGTGTTACGT GCTGTTGACGGGATCGAGCTGCAGGATGGCACTGCGCTGGGTGGCGCCATCGATAAGTCTCTTGAAGCCGTCAAGATGGC TCCCGGGGGGTCTAAAAATCCGGCTCCGGCCGCCATTGTCATGCTCAGTGATGGGGATAATACCCAAGGCGGTTCTCCCC TGGTGGCGGCCAACCGAGCTGCCGCGGCCAAAGTCCCGGTGTACACCATCGCCTTTGGTACCGAGACCGGGTATGTCGAC CTTAACGGGCAGCGAGAGAGAGTTGCACCCGATACCAAACTCTTATCTACTGTCGCCGACCGTACTCACGCTAAATCGTG GACCGCCGACTCGGCGGACAAGCTCCAGGAGGTTTATCAGCAGGTGCACTCGTCGGTGGGTTACGAGCCGGTAAGAAAGG AAGTGACGGCAACGTGGGCTTTCTACGCCTTCTGCTTTGCCGTCGTCTCTGGGCTGGCCACCTTGTCAGTGGCGGTGAGA TGGCCATGA
Upstream 100 bases:
>100_bases TGCGCACCGACTCCGACTGGGTTACCGATATCGCACGCTTCGTCCTCGGATACCGGCGCACTGCTGCAATCTTGCATCAG CCGCCTCAGGGGGTGACCAA
Downstream 100 bases:
>100_bases TGACCCTGATTGCTTTTGGACGCCCTGGACGACTGTGGTGGCTCGTGGTGCCGGTAGTCTTCCTCGCTGTTTACCTTGTA GTGGTGATGTGGCGTCGCCA
Product: aerotolerance protein BatA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 322; Mature: 321
Protein sequence:
>322_residues MTPLFLGLPEVKSPWVPWLLLLVPVLLVFYIWASHRSRSTAMRFTNTAILGAVMSKQPQWKRHIAVAAALLCVATTTVAW ARPMGIEQVPRNRATIVVAIDSSLSMKADDVSPTRLAAAKAKAKDFINSLPTGFNVAVVSISEHPEIRMPPSTDRPTVLR AVDGIELQDGTALGGAIDKSLEAVKMAPGGSKNPAPAAIVMLSDGDNTQGGSPLVAANRAAAAKVPVYTIAFGTETGYVD LNGQRERVAPDTKLLSTVADRTHAKSWTADSADKLQEVYQQVHSSVGYEPVRKEVTATWAFYAFCFAVVSGLATLSVAVR WP
Sequences:
>Translated_322_residues MTPLFLGLPEVKSPWVPWLLLLVPVLLVFYIWASHRSRSTAMRFTNTAILGAVMSKQPQWKRHIAVAAALLCVATTTVAW ARPMGIEQVPRNRATIVVAIDSSLSMKADDVSPTRLAAAKAKAKDFINSLPTGFNVAVVSISEHPEIRMPPSTDRPTVLR AVDGIELQDGTALGGAIDKSLEAVKMAPGGSKNPAPAAIVMLSDGDNTQGGSPLVAANRAAAAKVPVYTIAFGTETGYVD LNGQRERVAPDTKLLSTVADRTHAKSWTADSADKLQEVYQQVHSSVGYEPVRKEVTATWAFYAFCFAVVSGLATLSVAVR WP >Mature_321_residues TPLFLGLPEVKSPWVPWLLLLVPVLLVFYIWASHRSRSTAMRFTNTAILGAVMSKQPQWKRHIAVAAALLCVATTTVAWA RPMGIEQVPRNRATIVVAIDSSLSMKADDVSPTRLAAAKAKAKDFINSLPTGFNVAVVSISEHPEIRMPPSTDRPTVLRA VDGIELQDGTALGGAIDKSLEAVKMAPGGSKNPAPAAIVMLSDGDNTQGGSPLVAANRAAAAKVPVYTIAFGTETGYVDL NGQRERVAPDTKLLSTVADRTHAKSWTADSADKLQEVYQQVHSSVGYEPVRKEVTATWAFYAFCFAVVSGLATLSVAVRW P
Specific function: Unknown
COG id: COG2304
COG function: function code R; Uncharacterized protein containing a von Willebrand factor type A (vWA) domain
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 VWFA domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022933 - InterPro: IPR002035 [H]
Pfam domain/function: PF00092 VWA [H]
EC number: NA
Molecular weight: Translated: 34489; Mature: 34358
Theoretical pI: Translated: 9.76; Mature: 9.76
Prosite motif: PS50234 VWFA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPLFLGLPEVKSPWVPWLLLLVPVLLVFYIWASHRSRSTAMRFTNTAILGAVMSKQPQW CCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHH KRHIAVAAALLCVATTTVAWARPMGIEQVPRNRATIVVAIDSSLSMKADDVSPTRLAAAK HHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHH AKAKDFINSLPTGFNVAVVSISEHPEIRMPPSTDRPTVLRAVDGIELQDGTALGGAIDKS HHHHHHHHHCCCCCEEEEEEECCCCCEECCCCCCCCCEEHHCCCCEECCCCCCCHHHHHH LEAVKMAPGGSKNPAPAAIVMLSDGDNTQGGSPLVAANRAAAAKVPVYTIAFGTETGYVD HHHEEECCCCCCCCCCEEEEEEECCCCCCCCCCEEEECCCCCCCCCEEEEEECCCCCEEE LNGQRERVAPDTKLLSTVADRTHAKSWTADSADKLQEVYQQVHSSVGYEPVRKEVTATWA ECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHH FYAFCFAVVSGLATLSVAVRWP HHHHHHHHHHHHHHEEEEEECC >Mature Secondary Structure TPLFLGLPEVKSPWVPWLLLLVPVLLVFYIWASHRSRSTAMRFTNTAILGAVMSKQPQW CCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHH KRHIAVAAALLCVATTTVAWARPMGIEQVPRNRATIVVAIDSSLSMKADDVSPTRLAAAK HHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHH AKAKDFINSLPTGFNVAVVSISEHPEIRMPPSTDRPTVLRAVDGIELQDGTALGGAIDKS HHHHHHHHHCCCCCEEEEEEECCCCCEECCCCCCCCCEEHHCCCCEECCCCCCCHHHHHH LEAVKMAPGGSKNPAPAAIVMLSDGDNTQGGSPLVAANRAAAAKVPVYTIAFGTETGYVD HHHEEECCCCCCCCCCEEEEEEECCCCCCCCCCEEEECCCCCCCCCEEEEEECCCCCEEE LNGQRERVAPDTKLLSTVADRTHAKSWTADSADKLQEVYQQVHSSVGYEPVRKEVTATWA ECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHH FYAFCFAVVSGLATLSVAVRWP HHHHHHHHHHHHHHEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA