| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is 50842460
Identifier: 50842460
GI number: 50842460
Start: 1059852
End: 1060895
Strand: Direct
Name: 50842460
Synonym: PPA0975
Alternate gene names: NA
Gene position: 1059852-1060895 (Clockwise)
Preceding gene: 50842459
Following gene: 50842461
Centisome position: 41.4
GC content: 61.97
Gene sequence:
>1044_bases ATGGCGCGACCAACATTTCGCGATCCGCAGGCACCGTCAGTGGCGCAGACGCTGGTGAGTCCACCTACTGGGGCGACTCT GCCGCTTAACCAGCTTGCCCCCGAGGCCGCGCTGCGTCGCTTGGAACTCACGATCGTGCGCCGATTGGAGGGATTCCTCC ACGGTGACCACTTGGGTCTGCTGCCCGGGACTGGAGCTGACGTTAACGACGCCCGTCCCTACGAACCCGGTCAAGACGAT GTGCGCATGATGGATTGGGCCGTTACAGCCCGTACCACCGTCCCCCACGTACGTGAGACCATTGCCGACCGTGAACTCGA GGTATGGGCACTTCTCGACGTGACCGGTTCCATGAACTGGGGCACGGTGTCCATGACGAAACGTGACTTGGGTATCGCCG CTATTGCGACCATCGGTTTTCTCTCCCAGCGAATGGGGGACCGGTTTGGCGGGGTCATTATGCGCCCCGATTCGGTGCGT CGTTTGCCGGCCCGGTCCGGGCGAACAGCCCTTTATGGACTGCTGCGCTCGATGCTGACTGAGCCGATCGTCGCCGACAA CGCTCCCGGACAGGTGACTCTGGCCAAAGGCATCGAAAATCTCGCTGCCTCGGGGAGGCGTCGCGGTATGAAGGTCGTCG TTTCTGACTTCCTTTCTCCCGGTGACGATGTTCTGAATCCCAATGATCGCCCGGAGTGGGAACGGTCCCTACGTCGGTTG TCGGTGCGAAACCAGGTGCTGTGCATCGAAGTTGTTGACGCTGCTGAGCTGGACTTTCCCGACGTGGGTGACGTCATGGT CCGAGACCCAGAAACGTCTTTCGCCCACTATGTCAATACCGCTGACAAGGCCACCCGCGAGCGGATGAACGCTGCCTCCC GCGCCCAGCGCGAGCGTATCTCGGCGGCTATCCGACGTGCGGGGGCAGGACACCTACAGCTGCGCACCGACTCCGACTGG GTTACCGATATCGCACGCTTCGTCCTCGGATACCGGCGCACTGCTGCAATCTTGCATCAGCCGCCTCAGGGGGTGACCAA GTGA
Upstream 100 bases:
>100_bases AACGAGGAGCAGCGTCAGACTGCTCAGCACAATTACCCTAACGATCTGGGCCAATACCCTGCTCCGACGACCCCGCCCGC CCAGCTCTGAGGCGTCCGTT
Downstream 100 bases:
>100_bases CGCCGCTCTTTCTCGGCCTACCTGAGGTCAAGTCGCCGTGGGTGCCCTGGCTGTTGCTGCTCGTCCCGGTGCTGCTGGTC TTCTACATCTGGGCGTCGCA
Product: putative MoxR
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 347; Mature: 346
Protein sequence:
>347_residues MARPTFRDPQAPSVAQTLVSPPTGATLPLNQLAPEAALRRLELTIVRRLEGFLHGDHLGLLPGTGADVNDARPYEPGQDD VRMMDWAVTARTTVPHVRETIADRELEVWALLDVTGSMNWGTVSMTKRDLGIAAIATIGFLSQRMGDRFGGVIMRPDSVR RLPARSGRTALYGLLRSMLTEPIVADNAPGQVTLAKGIENLAASGRRRGMKVVVSDFLSPGDDVLNPNDRPEWERSLRRL SVRNQVLCIEVVDAAELDFPDVGDVMVRDPETSFAHYVNTADKATRERMNAASRAQRERISAAIRRAGAGHLQLRTDSDW VTDIARFVLGYRRTAAILHQPPQGVTK
Sequences:
>Translated_347_residues MARPTFRDPQAPSVAQTLVSPPTGATLPLNQLAPEAALRRLELTIVRRLEGFLHGDHLGLLPGTGADVNDARPYEPGQDD VRMMDWAVTARTTVPHVRETIADRELEVWALLDVTGSMNWGTVSMTKRDLGIAAIATIGFLSQRMGDRFGGVIMRPDSVR RLPARSGRTALYGLLRSMLTEPIVADNAPGQVTLAKGIENLAASGRRRGMKVVVSDFLSPGDDVLNPNDRPEWERSLRRL SVRNQVLCIEVVDAAELDFPDVGDVMVRDPETSFAHYVNTADKATRERMNAASRAQRERISAAIRRAGAGHLQLRTDSDW VTDIARFVLGYRRTAAILHQPPQGVTK >Mature_346_residues ARPTFRDPQAPSVAQTLVSPPTGATLPLNQLAPEAALRRLELTIVRRLEGFLHGDHLGLLPGTGADVNDARPYEPGQDDV RMMDWAVTARTTVPHVRETIADRELEVWALLDVTGSMNWGTVSMTKRDLGIAAIATIGFLSQRMGDRFGGVIMRPDSVRR LPARSGRTALYGLLRSMLTEPIVADNAPGQVTLAKGIENLAASGRRRGMKVVVSDFLSPGDDVLNPNDRPEWERSLRRLS VRNQVLCIEVVDAAELDFPDVGDVMVRDPETSFAHYVNTADKATRERMNAASRAQRERISAAIRRAGAGHLQLRTDSDWV TDIARFVLGYRRTAAILHQPPQGVTK
Specific function: Unknown
COG id: COG1721
COG function: function code R; Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.avium MAV169 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002881 - InterPro: IPR002035 [H]
Pfam domain/function: PF01882 DUF58 [H]
EC number: NA
Molecular weight: Translated: 38166; Mature: 38035
Theoretical pI: Translated: 9.55; Mature: 9.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARPTFRDPQAPSVAQTLVSPPTGATLPLNQLAPEAALRRLELTIVRRLEGFLHGDHLGL CCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHCHHHHHHHHHHHHHHHHHHHHCCCCEEC LPGTGADVNDARPYEPGQDDVRMMDWAVTARTTVPHVRETIADRELEVWALLDVTGSMNW CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCEEEEEEEEECCCCCC GTVSMTKRDLGIAAIATIGFLSQRMGDRFGGVIMRPDSVRRLPARSGRTALYGLLRSMLT CEEEEEHHHCCHHHHHHHHHHHHHHHHHHCCEEECCHHHHHCCCCCCHHHHHHHHHHHHH EPIVADNAPGQVTLAKGIENLAASGRRRGMKVVVSDFLSPGDDVLNPNDRPEWERSLRRL CCCCCCCCCCEEEHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH SVRNQVLCIEVVDAAELDFPDVGDVMVRDPETSFAHYVNTADKATRERMNAASRAQRERI HHCCCEEEEEEECCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SAAIRRAGAGHLQLRTDSDWVTDIARFVLGYRRTAAILHQPPQGVTK HHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure ARPTFRDPQAPSVAQTLVSPPTGATLPLNQLAPEAALRRLELTIVRRLEGFLHGDHLGL CCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHCHHHHHHHHHHHHHHHHHHHHCCCCEEC LPGTGADVNDARPYEPGQDDVRMMDWAVTARTTVPHVRETIADRELEVWALLDVTGSMNW CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCEEEEEEEEECCCCCC GTVSMTKRDLGIAAIATIGFLSQRMGDRFGGVIMRPDSVRRLPARSGRTALYGLLRSMLT CEEEEEHHHCCHHHHHHHHHHHHHHHHHHCCEEECCHHHHHCCCCCCHHHHHHHHHHHHH EPIVADNAPGQVTLAKGIENLAASGRRRGMKVVVSDFLSPGDDVLNPNDRPEWERSLRRL CCCCCCCCCCEEEHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH SVRNQVLCIEVVDAAELDFPDVGDVMVRDPETSFAHYVNTADKATRERMNAASRAQRERI HHCCCEEEEEEECCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SAAIRRAGAGHLQLRTDSDWVTDIARFVLGYRRTAAILHQPPQGVTK HHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]