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The map label for this gene is 50842434

Identifier: 50842434

GI number: 50842434

Start: 1030909

End: 1031679

Strand: Direct

Name: 50842434

Synonym: PPA0950

Alternate gene names: NA

Gene position: 1030909-1031679 (Clockwise)

Preceding gene: 50842433

Following gene: 50842435

Centisome position: 40.27

GC content: 56.42

Gene sequence:

>771_bases
ATGAGTGTGCCTGACGTTCGAGACCGTCGTGACCTTGAACGCGGGGGAGATGCCGTAGCGGTTCATACGCATAGCGCGGC
ACGTCCTTCCAACGTCACATTAAAATTGATCATGGCCATTACGGGGACGATATTCGCGTTATTCGTCTTCGTCCATATGG
TCGGAAACCTGAAGGCCTTTATGGGGCCAGGAGATTACAACGCCTACGCCGAGTTTCTCCGAACCGTGTTGTACCCGCTA
TTTCCCGTCGGTGGGGTTTTGTGGTGCTTCCGGATTGTTTTGCTTGTGTGCCTGGTCTTGCATGTGTGGGCCGGTCTGAC
GATCTGGGTGAGGGGGCGACGAGCACGCGGCCGATTTTCCCGGCATAACATGAAGGCCCTGGGTTGGGGAGCCCGCACGA
TGGTGCTGTCAGGAATTGTCATCTTGGCTTTCGTCGTGGTGCATATCCTCGATCTGACCTTGGGCATGGGCGTACAGTCC
TCATCCTTCCGGGCGCCAGTTAATGAGGGAACTCCTGACATCCACATCACCGCATACCAGAACCTCGTCGCCAGCCTGTC
GCGTCCGTGGATGGCGATCTTTTACACCGTCGTCATGATCATCATTGGGCTGCACATCGCCCAGGGCGTACGTAACACCA
TCAATGATTTTGGCGGTACAGGACGCCGACTGCGCGCTATTTGGACGGTGATTGGTCTCCTCATCGCGCTGGCCATTGTG
GTGTGCAACGGCGCACTTCCCATGCTCATTCTTGCCGGGGTGATCTCATGA

Upstream 100 bases:

>100_bases
CGGGGTCGGGGCACTCACGACGATTATCCTGACCCCGGTGTCGTTGGAGAAAACATCATCGTTTAGGCTGGTCGCGTAGC
AGCGAAAGGGTGATGACTCC

Downstream 100 bases:

>100_bases
ATAACTGGATTGAGGCCGTCAAGAAGCCTCTCGAGATGATTACTGGGCGTCATGCGGGCGCTAGACCCGAGGAGCCTGGC
GCTGAACTAGTGAAACCCGA

Product: putative succinate dehydrogenase subunit C

Products: fumarate; reduced acceptor

Alternate protein names: Succinate Dehydrogenase Subunit C; Cytochrome B Subunit; Succinate Dehydrogenase Subunit; Fumarate Reductase Cytochrome B Subunit; SuccinateQuinone Oxidoreductase-Like Protein; Succinate Dehydrogenase/Fumarate Reductase Cytochrome; Succinate Dehydrogenase Cytochrome Subunit B; Succinate Dehydrogenease Cytochrome B Subunit; Succinate Dehydrogenase Cytochrome B Subunit SdhC

Number of amino acids: Translated: 256; Mature: 255

Protein sequence:

>256_residues
MSVPDVRDRRDLERGGDAVAVHTHSAARPSNVTLKLIMAITGTIFALFVFVHMVGNLKAFMGPGDYNAYAEFLRTVLYPL
FPVGGVLWCFRIVLLVCLVLHVWAGLTIWVRGRRARGRFSRHNMKALGWGARTMVLSGIVILAFVVVHILDLTLGMGVQS
SSFRAPVNEGTPDIHITAYQNLVASLSRPWMAIFYTVVMIIIGLHIAQGVRNTINDFGGTGRRLRAIWTVIGLLIALAIV
VCNGALPMLILAGVIS

Sequences:

>Translated_256_residues
MSVPDVRDRRDLERGGDAVAVHTHSAARPSNVTLKLIMAITGTIFALFVFVHMVGNLKAFMGPGDYNAYAEFLRTVLYPL
FPVGGVLWCFRIVLLVCLVLHVWAGLTIWVRGRRARGRFSRHNMKALGWGARTMVLSGIVILAFVVVHILDLTLGMGVQS
SSFRAPVNEGTPDIHITAYQNLVASLSRPWMAIFYTVVMIIIGLHIAQGVRNTINDFGGTGRRLRAIWTVIGLLIALAIV
VCNGALPMLILAGVIS
>Mature_255_residues
SVPDVRDRRDLERGGDAVAVHTHSAARPSNVTLKLIMAITGTIFALFVFVHMVGNLKAFMGPGDYNAYAEFLRTVLYPLF
PVGGVLWCFRIVLLVCLVLHVWAGLTIWVRGRRARGRFSRHNMKALGWGARTMVLSGIVILAFVVVHILDLTLGMGVQSS
SFRAPVNEGTPDIHITAYQNLVASLSRPWMAIFYTVVMIIIGLHIAQGVRNTINDFGGTGRRLRAIWTVIGLLIALAIVV
CNGALPMLILAGVIS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.3.99.1

Molecular weight: Translated: 28001; Mature: 27870

Theoretical pI: Translated: 11.26; Mature: 11.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVPDVRDRRDLERGGDAVAVHTHSAARPSNVTLKLIMAITGTIFALFVFVHMVGNLKAF
CCCCCCCHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MGPGDYNAYAEFLRTVLYPLFPVGGVLWCFRIVLLVCLVLHVWAGLTIWVRGRRARGRFS
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHCCCHH
RHNMKALGWGARTMVLSGIVILAFVVVHILDLTLGMGVQSSSFRAPVNEGTPDIHITAYQ
HCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEHHHH
NLVASLSRPWMAIFYTVVMIIIGLHIAQGVRNTINDFGGTGRRLRAIWTVIGLLIALAIV
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
VCNGALPMLILAGVIS
HHCCCHHHHHHHHHCC
>Mature Secondary Structure 
SVPDVRDRRDLERGGDAVAVHTHSAARPSNVTLKLIMAITGTIFALFVFVHMVGNLKAF
CCCCCCHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MGPGDYNAYAEFLRTVLYPLFPVGGVLWCFRIVLLVCLVLHVWAGLTIWVRGRRARGRFS
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHCCCHH
RHNMKALGWGARTMVLSGIVILAFVVVHILDLTLGMGVQSSSFRAPVNEGTPDIHITAYQ
HCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEHHHH
NLVASLSRPWMAIFYTVVMIIIGLHIAQGVRNTINDFGGTGRRLRAIWTVIGLLIALAIV
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
VCNGALPMLILAGVIS
HHCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: succinate; acceptor

Specific reaction: succinate + acceptor = fumarate + reduced acceptor

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA