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The map label for this gene is ytcJ [H]

Identifier: 50842424

GI number: 50842424

Start: 1020344

End: 1021834

Strand: Reverse

Name: ytcJ [H]

Synonym: PPA0940

Alternate gene names: 50842424

Gene position: 1021834-1020344 (Counterclockwise)

Preceding gene: 50842426

Following gene: 50842419

Centisome position: 39.91

GC content: 62.51

Gene sequence:

>1491_bases
ATGTTGTTGCTTCACAATGCCAGAATCCTCGACCTCACCGACGGGTCGACGGGCGAGCCCACCGATGTACTGCTATCGGA
TCGTGTCCTTGCCCTCGGTCCCGAAGCACAGCAGCAGGCCCACAGTGCGAGGGTGCGAAGTATTGACCTTGGCGGTCGCC
TCCTCATGCCTGGTCTGTGGGACGAGCACGTCCACGTCGGGCAGTGGGCGTTGGCGTCCCGGAGGTTCCTTGTCAGCCAA
ACCGCGAGTTGCGAGACGGCGCTCGAGGAAGTCGCCACCCATGTCAAACGACGCGAAGGCAGCGACGAGCCGATTCTGCA
GGGATTCGGGTTCCGTCCCTCGCTATGGGGCTCAAATCCCAACGCCCGTCAGCTTGACGCCGTCACCGGTGATCGTGCCG
TTATCCTCGTCTCCGCCGACCTACATTCCTCGTGGTGCAATACCGCTGCTATGCGCAAACTCGGTATCGAAGGAGACGGA
TTTCTGCGCGAGCAGACCAGTTTCGACGTTCAAACCCAGCTCTCACAGGTCAACCCTCACGTGTTGGATGGTTGGGTGGG
AAGCTGCAGCACCGCGGCGGCGCGCCTGGGGATCACTGGCATCCGCGATATGGAGTTCAGCACTGACGTCGAGACGTGGC
TACAGCGCAAAGCTGATGGCCGGTGCCCGCTACGAGTCGAGGTGAGTGTGTACCCCGAACGCCTGGACGAGGCAATTGCG
CAGGTGCTGGCGACTGGCCAAGCCCCCGCCACTGATAAGCCTGGTCCAAGCCGAGTAGCTATGGGCCCGCTCAAGGTCAT
CGTCGACGGGTCGATGTCGACGCGCACTGCCTGGTGCATGGATTCCTATCCGGCGGGAGCCGGTCCAGATGGGGCCGGAA
TTGACTCGGTGACGCCGGAGGATTTGGTCGACCTCATGAATCGAGCCAAAACTGGCAACCTGCAATGCGCGGCTCACGCC
ATAGGAGACCGAGCGGCCAAAGAGGTCCTCAATGCTTTCGAGGTGACCGGGATTTCTGGGTCGATCGAACACGCTCAAGT
GCTCACTGACGCAGACGTTCGACGATTTGCGGCTCTCGGGGTGCGAGCAAGCGTCCAACCTCTACACCTCGTCGACGACC
GGGACGCCACCGACGTCATGTGGTCAGACCGCGCTGATCGCTGCTTCCGGTTCGCCGACATGGTGCGAGCCGGGACCGAG
TTAGCACTGGGATCAGACGCCCCAGTCTCCCCCGTCGATCCGTGGGGCGCGATCCGCGTGGCCGTCGAGAGAACCGGTGA
CCGGCGCCCAAGCTGGCACCCTGAGCAGGCTCTTACTCTGTCCCAGGCCATCACAGCCAGCACCCGTCACGTAACACAGG
TGGTCACGGGCGGACCAGGAGACGTCATCGCTGTGGCCCACAATCCCTTCGACCTGTCCGGTAATGCATTGGCAGGCATC
ACCAGCGACTTAACAGTCGTCGGTGGAGAGGTGACGGCCGCAGCACTGTGA

Upstream 100 bases:

>100_bases
GACATGCGGGTTACAGTACACCGCGATCGACCCAGCATGGGATATTTCTCAAAATCGTCTCACGTGTGACATCGTCCGCT
GTCGGTGGGAATATCTGGGA

Downstream 100 bases:

>100_bases
GACCATCACTTCCCACCGACCCAATATTTCAAAACCCCAATCGATTGAGGTATTTCGGGTCGGACTGCCAGTTCGGCAAC
ACCTTGACCTGAAGGTCTAA

Product: putative metal-dependent hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 496; Mature: 496

Protein sequence:

>496_residues
MLLLHNARILDLTDGSTGEPTDVLLSDRVLALGPEAQQQAHSARVRSIDLGGRLLMPGLWDEHVHVGQWALASRRFLVSQ
TASCETALEEVATHVKRREGSDEPILQGFGFRPSLWGSNPNARQLDAVTGDRAVILVSADLHSSWCNTAAMRKLGIEGDG
FLREQTSFDVQTQLSQVNPHVLDGWVGSCSTAAARLGITGIRDMEFSTDVETWLQRKADGRCPLRVEVSVYPERLDEAIA
QVLATGQAPATDKPGPSRVAMGPLKVIVDGSMSTRTAWCMDSYPAGAGPDGAGIDSVTPEDLVDLMNRAKTGNLQCAAHA
IGDRAAKEVLNAFEVTGISGSIEHAQVLTDADVRRFAALGVRASVQPLHLVDDRDATDVMWSDRADRCFRFADMVRAGTE
LALGSDAPVSPVDPWGAIRVAVERTGDRRPSWHPEQALTLSQAITASTRHVTQVVTGGPGDVIAVAHNPFDLSGNALAGI
TSDLTVVGGEVTAAAL

Sequences:

>Translated_496_residues
MLLLHNARILDLTDGSTGEPTDVLLSDRVLALGPEAQQQAHSARVRSIDLGGRLLMPGLWDEHVHVGQWALASRRFLVSQ
TASCETALEEVATHVKRREGSDEPILQGFGFRPSLWGSNPNARQLDAVTGDRAVILVSADLHSSWCNTAAMRKLGIEGDG
FLREQTSFDVQTQLSQVNPHVLDGWVGSCSTAAARLGITGIRDMEFSTDVETWLQRKADGRCPLRVEVSVYPERLDEAIA
QVLATGQAPATDKPGPSRVAMGPLKVIVDGSMSTRTAWCMDSYPAGAGPDGAGIDSVTPEDLVDLMNRAKTGNLQCAAHA
IGDRAAKEVLNAFEVTGISGSIEHAQVLTDADVRRFAALGVRASVQPLHLVDDRDATDVMWSDRADRCFRFADMVRAGTE
LALGSDAPVSPVDPWGAIRVAVERTGDRRPSWHPEQALTLSQAITASTRHVTQVVTGGPGDVIAVAHNPFDLSGNALAGI
TSDLTVVGGEVTAAAL
>Mature_496_residues
MLLLHNARILDLTDGSTGEPTDVLLSDRVLALGPEAQQQAHSARVRSIDLGGRLLMPGLWDEHVHVGQWALASRRFLVSQ
TASCETALEEVATHVKRREGSDEPILQGFGFRPSLWGSNPNARQLDAVTGDRAVILVSADLHSSWCNTAAMRKLGIEGDG
FLREQTSFDVQTQLSQVNPHVLDGWVGSCSTAAARLGITGIRDMEFSTDVETWLQRKADGRCPLRVEVSVYPERLDEAIA
QVLATGQAPATDKPGPSRVAMGPLKVIVDGSMSTRTAWCMDSYPAGAGPDGAGIDSVTPEDLVDLMNRAKTGNLQCAAHA
IGDRAAKEVLNAFEVTGISGSIEHAQVLTDADVRRFAALGVRASVQPLHLVDDRDATDVMWSDRADRCFRFADMVRAGTE
LALGSDAPVSPVDPWGAIRVAVERTGDRRPSWHPEQALTLSQAITASTRHVTQVVTGGPGDVIAVAHNPFDLSGNALAGI
TSDLTVVGGEVTAAAL

Specific function: Unknown

COG id: COG1574

COG function: function code R; Predicted metal-dependent hydrolase with the TIM-barrel fold

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013108
- InterPro:   IPR011059 [H]

Pfam domain/function: PF07969 Amidohydro_3 [H]

EC number: NA

Molecular weight: Translated: 52888; Mature: 52888

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLLHNARILDLTDGSTGEPTDVLLSDRVLALGPEAQQQAHSARVRSIDLGGRLLMPGLW
CEEEECCEEEEECCCCCCCCCCEEECCCEEEECCHHHHHHHHHHEEEECCCCEEECCCCC
DEHVHVGQWALASRRFLVSQTASCETALEEVATHVKRREGSDEPILQGFGFRPSLWGSNP
CCCEECCHHHHHHCHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCC
NARQLDAVTGDRAVILVSADLHSSWCNTAAMRKLGIEGDGFLREQTSFDVQTQLSQVNPH
CCCEEEEECCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCC
VLDGWVGSCSTAAARLGITGIRDMEFSTDVETWLQRKADGRCPLRVEVSVYPERLDEAIA
EECCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCCEEEEEEECHHHHHHHHH
QVLATGQAPATDKPGPSRVAMGPLKVIVDGSMSTRTAWCMDSYPAGAGPDGAGIDSVTPE
HHHHCCCCCCCCCCCCCCEEECCEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCHH
DLVDLMNRAKTGNLQCAAHAIGDRAAKEVLNAFEVTGISGSIEHAQVLTDADVRRFAALG
HHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHC
VRASVQPLHLVDDRDATDVMWSDRADRCFRFADMVRAGTELALGSDAPVSPVDPWGAIRV
CCCCCCCEEEECCCCCCCCHHCCCHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCEEEE
AVERTGDRRPSWHPEQALTLSQAITASTRHVTQVVTGGPGDVIAVAHNPFDLSGNALAGI
EEECCCCCCCCCCHHHHHHHHHHHHHHHHHHEEEEECCCCCEEEEECCCCCCCCCEEECC
TSDLTVVGGEVTAAAL
CCCEEEECCCEEEECC
>Mature Secondary Structure
MLLLHNARILDLTDGSTGEPTDVLLSDRVLALGPEAQQQAHSARVRSIDLGGRLLMPGLW
CEEEECCEEEEECCCCCCCCCCEEECCCEEEECCHHHHHHHHHHEEEECCCCEEECCCCC
DEHVHVGQWALASRRFLVSQTASCETALEEVATHVKRREGSDEPILQGFGFRPSLWGSNP
CCCEECCHHHHHHCHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCC
NARQLDAVTGDRAVILVSADLHSSWCNTAAMRKLGIEGDGFLREQTSFDVQTQLSQVNPH
CCCEEEEECCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCC
VLDGWVGSCSTAAARLGITGIRDMEFSTDVETWLQRKADGRCPLRVEVSVYPERLDEAIA
EECCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCCEEEEEEECHHHHHHHHH
QVLATGQAPATDKPGPSRVAMGPLKVIVDGSMSTRTAWCMDSYPAGAGPDGAGIDSVTPE
HHHHCCCCCCCCCCCCCCEEECCEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCHH
DLVDLMNRAKTGNLQCAAHAIGDRAAKEVLNAFEVTGISGSIEHAQVLTDADVRRFAALG
HHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHC
VRASVQPLHLVDDRDATDVMWSDRADRCFRFADMVRAGTELALGSDAPVSPVDPWGAIRV
CCCCCCCEEEECCCCCCCCHHCCCHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCEEEE
AVERTGDRRPSWHPEQALTLSQAITASTRHVTQVVTGGPGDVIAVAHNPFDLSGNALAGI
EEECCCCCCCCCCHHHHHHHHHHHHHHHHHHEEEEECCCCCEEEEECCCCCCCCCEEECC
TSDLTVVGGEVTAAAL
CCCEEEECCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]