| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is 50842377
Identifier: 50842377
GI number: 50842377
Start: 967856
End: 968878
Strand: Direct
Name: 50842377
Synonym: PPA0891
Alternate gene names: NA
Gene position: 967856-968878 (Clockwise)
Preceding gene: 50842375
Following gene: 50842379
Centisome position: 37.8
GC content: 58.65
Gene sequence:
>1023_bases ATGACAGCACTACATTCCTCCGCCACTGATAACCGTGATCCGCTGACCGTCAGAACCGTCGAAGAAGCGGTGACCTTGGC GCCGTACCTCTTGGGATTTCAGCCTACTGAGAGCCTGCTCATGATTGTCGCCGACGACGGTGCCGCGTGTCAGGGTTTCG TTGCCCGAGTTGATCTTGATGGCCTCGAATCCGCACCGGCTATGAATGCCTTCGCTGCGCGGGTCGGTCCCTTGGCAGGG CAGGGTCGAACGGTCGTCTTAGCGTTCAGCAAAGATCAAGATCGCGGTATGGCGACTCTGGCATCGGCCGTCGAGGCGAT GAAGGGCATGAATATTGGTGACGCCGCGTGGACTGACGGTGAGTATTGGCGCAGTATCTTCTGTGATGAACAGGGTTGTG GCGAAAACCACCGCTTTGTTCCGGATCCGACCATTGCAGCCGAGGCGGTCTATCGCGGGCTAACCGTCCTGCCCAGTCGC ACCAGCCTCGTCGATAAACTCTCGGGCCCTGGGCGCACCTGTGATCCAGATACTCGCAGACTTCTGGCCAATTCCCGGCG GCGGCTTTCCCGCAAAGATGACAACACCGTGGAGGTCAGGTGTCAAGCCCTCTTTGGGTCTGGCGATGAGATCAACGATG CGGTTGTAACGGAGCTAGCGGTTGCCGTCCAGCGTTCCGACATAGCGCGCAGACTGTGGATGTCAATGGAACGGACCGAG GCGTCACGGTGGCTCAGAATATGGAGTCGAGCAGTCGAGATCATTCCTGATCGGATGGCGCCAGCACCGCTGTCTCTGTG CGGACTGGCAGGATGGTTGAGTGGTGAAGGAGTAGTGGCGGCGGTGTGCGCTCGGCGATGCGAATTTATGGTGGGAACAG CCGACCTGCCAGCTGCGCTGGCAGTCATCGTTGACGCTTTTGTACCGCCCAAGTTGTGGGACGTGATGGACCATGACCCG ACAGTGATTGCCCACCCATTTGTAGAAGAGCAGGTAGACGAGGAGATCAACTTATCGGCGTAG
Upstream 100 bases:
>100_bases TCCACAGCGTGGCGTCAAGACAAGGTGGCGCAGATGGGAGTTGTCCACAGATTCGAAATTGCTTGGCGAATGTGGTGGGG TCGAGACGACAACTGGAGGT
Downstream 100 bases:
>100_bases CGACGGAAGTTACACCCGCGTACCGACGAGGTGACCGATGAGATAGGTGATCGCCATGGAACAAATACCGACGATGATAT TGCGGGCGACTGGACGGGTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 340; Mature: 339
Protein sequence:
>340_residues MTALHSSATDNRDPLTVRTVEEAVTLAPYLLGFQPTESLLMIVADDGAACQGFVARVDLDGLESAPAMNAFAARVGPLAG QGRTVVLAFSKDQDRGMATLASAVEAMKGMNIGDAAWTDGEYWRSIFCDEQGCGENHRFVPDPTIAAEAVYRGLTVLPSR TSLVDKLSGPGRTCDPDTRRLLANSRRRLSRKDDNTVEVRCQALFGSGDEINDAVVTELAVAVQRSDIARRLWMSMERTE ASRWLRIWSRAVEIIPDRMAPAPLSLCGLAGWLSGEGVVAAVCARRCEFMVGTADLPAALAVIVDAFVPPKLWDVMDHDP TVIAHPFVEEQVDEEINLSA
Sequences:
>Translated_340_residues MTALHSSATDNRDPLTVRTVEEAVTLAPYLLGFQPTESLLMIVADDGAACQGFVARVDLDGLESAPAMNAFAARVGPLAG QGRTVVLAFSKDQDRGMATLASAVEAMKGMNIGDAAWTDGEYWRSIFCDEQGCGENHRFVPDPTIAAEAVYRGLTVLPSR TSLVDKLSGPGRTCDPDTRRLLANSRRRLSRKDDNTVEVRCQALFGSGDEINDAVVTELAVAVQRSDIARRLWMSMERTE ASRWLRIWSRAVEIIPDRMAPAPLSLCGLAGWLSGEGVVAAVCARRCEFMVGTADLPAALAVIVDAFVPPKLWDVMDHDP TVIAHPFVEEQVDEEINLSA >Mature_339_residues TALHSSATDNRDPLTVRTVEEAVTLAPYLLGFQPTESLLMIVADDGAACQGFVARVDLDGLESAPAMNAFAARVGPLAGQ GRTVVLAFSKDQDRGMATLASAVEAMKGMNIGDAAWTDGEYWRSIFCDEQGCGENHRFVPDPTIAAEAVYRGLTVLPSRT SLVDKLSGPGRTCDPDTRRLLANSRRRLSRKDDNTVEVRCQALFGSGDEINDAVVTELAVAVQRSDIARRLWMSMERTEA SRWLRIWSRAVEIIPDRMAPAPLSLCGLAGWLSGEGVVAAVCARRCEFMVGTADLPAALAVIVDAFVPPKLWDVMDHDPT VIAHPFVEEQVDEEINLSA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36830; Mature: 36699
Theoretical pI: Translated: 4.52; Mature: 4.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTALHSSATDNRDPLTVRTVEEAVTLAPYLLGFQPTESLLMIVADDGAACQGFVARVDLD CCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCEEEEEECC GLESAPAMNAFAARVGPLAGQGRTVVLAFSKDQDRGMATLASAVEAMKGMNIGDAAWTDG CCCCCCHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCH EYWRSIFCDEQGCGENHRFVPDPTIAAEAVYRGLTVLPSRTSLVDKLSGPGRTCDPDTRR HHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCEECCCHHHHHHHHCCCCCCCCHHHHH LLANSRRRLSRKDDNTVEVRCQALFGSGDEINDAVVTELAVAVQRSDIARRLWMSMERTE HHHHHHHHHHCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ASRWLRIWSRAVEIIPDRMAPAPLSLCGLAGWLSGEGVVAAVCARRCEFMVGTADLPAAL HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHEEECCCCHHHHH AVIVDAFVPPKLWDVMDHDPTVIAHPFVEEQVDEEINLSA HHHHHHCCCCHHHHHCCCCCCEEECCHHHHHCCCCCCCCC >Mature Secondary Structure TALHSSATDNRDPLTVRTVEEAVTLAPYLLGFQPTESLLMIVADDGAACQGFVARVDLD CCCCCCCCCCCCCEEEEHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCEEEEEECC GLESAPAMNAFAARVGPLAGQGRTVVLAFSKDQDRGMATLASAVEAMKGMNIGDAAWTDG CCCCCCHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCH EYWRSIFCDEQGCGENHRFVPDPTIAAEAVYRGLTVLPSRTSLVDKLSGPGRTCDPDTRR HHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCEECCCHHHHHHHHCCCCCCCCHHHHH LLANSRRRLSRKDDNTVEVRCQALFGSGDEINDAVVTELAVAVQRSDIARRLWMSMERTE HHHHHHHHHHCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ASRWLRIWSRAVEIIPDRMAPAPLSLCGLAGWLSGEGVVAAVCARRCEFMVGTADLPAAL HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHEEECCCCHHHHH AVIVDAFVPPKLWDVMDHDPTVIAHPFVEEQVDEEINLSA HHHHHHCCCCHHHHHCCCCCCEEECCHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA