| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is thiM [H]
Identifier: 50842372
GI number: 50842372
Start: 962597
End: 963625
Strand: Direct
Name: thiM [H]
Synonym: PPA0885
Alternate gene names: 50842372
Gene position: 962597-963625 (Clockwise)
Preceding gene: 50842371
Following gene: 50842373
Centisome position: 37.6
GC content: 62.88
Gene sequence:
>1029_bases ATGCCGGCATGGTGTCACCCGGATCTTTGCCTGGTTGGAGCTGGTTTGGGCCGGCATTTCCCGATTAGTAGGGAGAGGAC CGTCGTGAGCGCACGGCACGGCGGTAGGTTAGAAGACAACGACGCGGGAGCCCACTGGTCGCTGGGGGCTGAGAGGGCGC CACGAAGGTGCCGACCGCCGGAACCTGTCCGGGTCATGCCGGCGAAGGGAGTGGTTGACATGACTGAATTGTCGAATTTG GTGGCGGAATCTCTAGAGCGACTACGCCGAGACAAGCCGCTGGTGCAGTGCCTGACGAACATCGTCGTGGCCAATTTCAC CGCTAACGTGTTGCTGTCTGCAGGGGCGGTTCCTGCCATGGTTGACAATCCCGAGGAATCCGAGGGATTCGCCTCCATTG CCGACGGTGTACTCGTCAACACCGGAACTCCCTACCGGGAGACCACCGAGGCCATGATTGCTGCTGCGCGCGGTGCCGCA AGCAGCAACACGCCATGGGTACTTGACCCGGTGGGGGTGGGCATGTCATGGCGCACTCGGGTGGTCCTGGATACCTTGGA CGTCGCCGCTCCAGCCGTCATCCGGGCGAACGCCTCTGAGGTGTTGGCATTGGCCGGTACTGGTGCCTCCTCTCGAGGCC CGGAGGCGGGAGATGCGGTTGAAGATGCCTTGGCGTCCGCGACTCAGCTCGTCCGCCATTACGGCTGCGTAGTGGCCATT AGCGGCCCCGTCGATCACATCCTCGATGCGGATCGGCATGTGACCGTGTCATCGGGGCATGAGTGGATGACGCGGGTTAC TGGAGTTGGATGCTCACTGGGAGCTCTCACGGCAGCCTTTGCGGGAATCCAGAATGACCATCTCATCGCGGCCGTGTCCG CGACCGCCATGTTGTGTGTCGTCGCCGAACGGGCAGCTGAGCGCAGTGCTGGTCCGGGGGCTTTCGCGCAAGCTCTCGTT GACGAATTATTCCTGGTGTCACCCGACGAGGTTGGTGAGCGGGGAGGGCTCCGCGATGTCACGGCCTGA
Upstream 100 bases:
>100_bases TCTTTGTCCCCGACAGCTCTCCATGACAACGAGGTTTCGGTCTCGGCAACCTCTGACGTAGCAGCGTCGAGAACGTCAAC GACAGGGTCAAGGCGGGGCT
Downstream 100 bases:
>100_bases ATTTGATCTGTCGGTTTATCTCGTCACCGACACCGCCCAGTGCGGCGGACCTGACGAGGTTGTTGAGACCGTGCGCCACG CTATCGCCGGCGGGGTGACT
Product: hydroxyethylthiazole kinase
Products: NA
Alternate protein names: 4-methyl-5-beta-hydroxyethylthiazole kinase; TH kinase; Thz kinase [H]
Number of amino acids: Translated: 342; Mature: 341
Protein sequence:
>342_residues MPAWCHPDLCLVGAGLGRHFPISRERTVVSARHGGRLEDNDAGAHWSLGAERAPRRCRPPEPVRVMPAKGVVDMTELSNL VAESLERLRRDKPLVQCLTNIVVANFTANVLLSAGAVPAMVDNPEESEGFASIADGVLVNTGTPYRETTEAMIAAARGAA SSNTPWVLDPVGVGMSWRTRVVLDTLDVAAPAVIRANASEVLALAGTGASSRGPEAGDAVEDALASATQLVRHYGCVVAI SGPVDHILDADRHVTVSSGHEWMTRVTGVGCSLGALTAAFAGIQNDHLIAAVSATAMLCVVAERAAERSAGPGAFAQALV DELFLVSPDEVGERGGLRDVTA
Sequences:
>Translated_342_residues MPAWCHPDLCLVGAGLGRHFPISRERTVVSARHGGRLEDNDAGAHWSLGAERAPRRCRPPEPVRVMPAKGVVDMTELSNL VAESLERLRRDKPLVQCLTNIVVANFTANVLLSAGAVPAMVDNPEESEGFASIADGVLVNTGTPYRETTEAMIAAARGAA SSNTPWVLDPVGVGMSWRTRVVLDTLDVAAPAVIRANASEVLALAGTGASSRGPEAGDAVEDALASATQLVRHYGCVVAI SGPVDHILDADRHVTVSSGHEWMTRVTGVGCSLGALTAAFAGIQNDHLIAAVSATAMLCVVAERAAERSAGPGAFAQALV DELFLVSPDEVGERGGLRDVTA >Mature_341_residues PAWCHPDLCLVGAGLGRHFPISRERTVVSARHGGRLEDNDAGAHWSLGAERAPRRCRPPEPVRVMPAKGVVDMTELSNLV AESLERLRRDKPLVQCLTNIVVANFTANVLLSAGAVPAMVDNPEESEGFASIADGVLVNTGTPYRETTEAMIAAARGAAS SNTPWVLDPVGVGMSWRTRVVLDTLDVAAPAVIRANASEVLALAGTGASSRGPEAGDAVEDALASATQLVRHYGCVVAIS GPVDHILDADRHVTVSSGHEWMTRVTGVGCSLGALTAAFAGIQNDHLIAAVSATAMLCVVAERAAERSAGPGAFAQALVD ELFLVSPDEVGERGGLRDVTA
Specific function: Thiamine biosynthesis. [C]
COG id: COG2145
COG function: function code H; Hydroxyethylthiazole kinase, sugar kinase family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Thz kinase family [H]
Homologues:
Organism=Escherichia coli, GI1788421, Length=249, Percent_Identity=40.9638554216867, Blast_Score=172, Evalue=3e-44, Organism=Saccharomyces cerevisiae, GI6325042, Length=280, Percent_Identity=30.7142857142857, Blast_Score=86, Evalue=1e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000417 [H]
Pfam domain/function: PF02110 HK [H]
EC number: =2.7.1.50 [H]
Molecular weight: Translated: 35630; Mature: 35499
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAWCHPDLCLVGAGLGRHFPISRERTVVSARHGGRLEDNDAGAHWSLGAERAPRRCRPP CCCCCCCCHHEEECCCCCCCCCCCCCEEEECCCCCCCCCCCCCCEECCCHHCCCCCCCCC EPVRVMPAKGVVDMTELSNLVAESLERLRRDKPLVQCLTNIVVANFTANVLLSAGAVPAM CCEEEECCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC VDNPEESEGFASIADGVLVNTGTPYRETTEAMIAAARGAASSNTPWVLDPVGVGMSWRTR CCCCCCCCCHHHHHCCEEEECCCCCHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCE VVLDTLDVAAPAVIRANASEVLALAGTGASSRGPEAGDAVEDALASATQLVRHYGCVVAI EEEHHHHHHCCHHEECCHHHEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEE SGPVDHILDADRHVTVSSGHEWMTRVTGVGCSLGALTAAFAGIQNDHLIAAVSATAMLCV CCCHHHHHCCCCEEEECCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEHHHHHHHHHH VAERAAERSAGPGAFAQALVDELFLVSPDEVGERGGLRDVTA HHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHCCCCCCCCCC >Mature Secondary Structure PAWCHPDLCLVGAGLGRHFPISRERTVVSARHGGRLEDNDAGAHWSLGAERAPRRCRPP CCCCCCCHHEEECCCCCCCCCCCCCEEEECCCCCCCCCCCCCCEECCCHHCCCCCCCCC EPVRVMPAKGVVDMTELSNLVAESLERLRRDKPLVQCLTNIVVANFTANVLLSAGAVPAM CCEEEECCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC VDNPEESEGFASIADGVLVNTGTPYRETTEAMIAAARGAASSNTPWVLDPVGVGMSWRTR CCCCCCCCCHHHHHCCEEEECCCCCHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCE VVLDTLDVAAPAVIRANASEVLALAGTGASSRGPEAGDAVEDALASATQLVRHYGCVVAI EEEHHHHHHCCHHEECCHHHEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEE SGPVDHILDADRHVTVSSGHEWMTRVTGVGCSLGALTAAFAGIQNDHLIAAVSATAMLCV CCCHHHHHCCCCEEEECCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEHHHHHHHHHH VAERAAERSAGPGAFAQALVDELFLVSPDEVGERGGLRDVTA HHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA