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The map label for this gene is whiA

Identifier: 50842302

GI number: 50842302

Start: 896409

End: 897398

Strand: Direct

Name: whiA

Synonym: PPA0815

Alternate gene names: 50842302

Gene position: 896409-897398 (Clockwise)

Preceding gene: 50842301

Following gene: 50842303

Centisome position: 35.01

GC content: 61.52

Gene sequence:

>990_bases
ATGGCGCTCACCCTGCAGGTGAAAAACGAGCTTGCGACAGTGCCGGTGCAGAAACTGTGCTGCCGCCGATCCGAGATCGC
GGCCACCCTACGATTCGCTGGCGGCATCCATCTGGTGCAGCATCGCCATCTTACGATCGAGGCAGAAGTCGACACGGGGG
GAGCTGCGCGACGACTGCGTCAGTCCATTCAGGAAGTCTTCGGTTTTGACACTGATCTCGTGGTCGTCAATGGCGCTGGG
CTCCACAGCAACACTCGCTACCTCATAAGAATGGTGCGCGGGGGTGCTGATTTGGCTCGTCTGACCGGACTGCTTGATCG
TCGTGGGCGTCCAGTGCGGGGCCTTCCGGTTCCTATTGTGGGTGGCGGACGATGCTGCCAGGCCGCTGCGTGGCGCGGAG
CTTTCCTGGCCCGCGGATCGCTTACCGAGCCGGGGCGCTCCATGGCGATGGAAATTACCGCTCCCGGTGAGGAGGCCGCC
ATGGCCCTCGTCGGGGCTGCTCGGCGTCTGGACATCACCGCGAAGCAACGTGAGTCTCGTCACGTCGATCGGGTGACGAT
ACGCGATGGTGACGCTATCTCGGCGATGCTTACCCGCATGGGAGCACACGAATCTGTGCTGGCTTGGGAAGATCGTCGGT
TGCGTCGGGAGGTGCGAGCATCTGCCAATCGGTTGGCTAATTTCGACGACGCTAACTTGCGTCGCTCTGCGCGAGCCGCT
GTTACCGCTAGTGCCCGGGTGGAACGAGCCCTAGAAATTCTCGGAGATTCCGTTCCGGACCATCTGAGAGCAGCTGGCCG
ACTTCGACTCGAGCATCGAAATGCCAGCTTGGAGGAATTGGGCAAGGTGCACGAGCCTCCGTTGACGAAGGATGCTATTG
CTGGTCGGATTCGTCGCCTGTTGGCTCTAGCGGACAAGACGGCCCGAAGCAACGGCGAGCCCACCACGTTGGAGAGCCTT
CCTGTCGAGATGCGTGATGATCGTGGCTGA

Upstream 100 bases:

>100_bases
TGGCGTCGGCCTATGCCAACATCATGGGGGTTCAGCCCCGTTGACCGTCGCCTAAGATCACCTTGTTATTCCCGTTACCC
CTTCCGGAGGCTAGACCCAC

Downstream 100 bases:

>100_bases
CGGCCATTACAGCGCGGTTACAGGGTAAACGTAAGCCTGGCTCTATTCCCACGTGGGAAGGTATTCGTGCAACCTTGTGA
TCATTCGTGCGATGACCTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 329; Mature: 328

Protein sequence:

>329_residues
MALTLQVKNELATVPVQKLCCRRSEIAATLRFAGGIHLVQHRHLTIEAEVDTGGAARRLRQSIQEVFGFDTDLVVVNGAG
LHSNTRYLIRMVRGGADLARLTGLLDRRGRPVRGLPVPIVGGGRCCQAAAWRGAFLARGSLTEPGRSMAMEITAPGEEAA
MALVGAARRLDITAKQRESRHVDRVTIRDGDAISAMLTRMGAHESVLAWEDRRLRREVRASANRLANFDDANLRRSARAA
VTASARVERALEILGDSVPDHLRAAGRLRLEHRNASLEELGKVHEPPLTKDAIAGRIRRLLALADKTARSNGEPTTLESL
PVEMRDDRG

Sequences:

>Translated_329_residues
MALTLQVKNELATVPVQKLCCRRSEIAATLRFAGGIHLVQHRHLTIEAEVDTGGAARRLRQSIQEVFGFDTDLVVVNGAG
LHSNTRYLIRMVRGGADLARLTGLLDRRGRPVRGLPVPIVGGGRCCQAAAWRGAFLARGSLTEPGRSMAMEITAPGEEAA
MALVGAARRLDITAKQRESRHVDRVTIRDGDAISAMLTRMGAHESVLAWEDRRLRREVRASANRLANFDDANLRRSARAA
VTASARVERALEILGDSVPDHLRAAGRLRLEHRNASLEELGKVHEPPLTKDAIAGRIRRLLALADKTARSNGEPTTLESL
PVEMRDDRG
>Mature_328_residues
ALTLQVKNELATVPVQKLCCRRSEIAATLRFAGGIHLVQHRHLTIEAEVDTGGAARRLRQSIQEVFGFDTDLVVVNGAGL
HSNTRYLIRMVRGGADLARLTGLLDRRGRPVRGLPVPIVGGGRCCQAAAWRGAFLARGSLTEPGRSMAMEITAPGEEAAM
ALVGAARRLDITAKQRESRHVDRVTIRDGDAISAMLTRMGAHESVLAWEDRRLRREVRASANRLANFDDANLRRSARAAV
TASARVERALEILGDSVPDHLRAAGRLRLEHRNASLEELGKVHEPPLTKDAIAGRIRRLLALADKTARSNGEPTTLESLP
VEMRDDRG

Specific function: May be required for sporulation

COG id: COG1481

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the whiA transcriptional regulatory family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): WHIA_PROAC (Q6A9J5)

Other databases:

- EMBL:   AE017283
- RefSeq:   YP_055529.1
- GeneID:   2932926
- GenomeReviews:   AE017283_GR
- KEGG:   pac:PPA0815
- NMPDR:   fig|267747.1.peg.806
- HOGENOM:   HBG322392
- OMA:   VTCPGPE
- ProtClustDB:   CLSK871931
- BioCyc:   PACN267747:PPA0815-MONOMER
- GO:   GO:0006350
- HAMAP:   MF_01420
- InterPro:   IPR003802
- InterPro:   IPR023054
- InterPro:   IPR018478
- TIGRFAMs:   TIGR00647

Pfam domain/function: PF02650 HTH_WhiA; PF10298 WhiA_N

EC number: NA

Molecular weight: Translated: 35931; Mature: 35800

Theoretical pI: Translated: 11.27; Mature: 11.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALTLQVKNELATVPVQKLCCRRSEIAATLRFAGGIHLVQHRHLTIEAEVDTGGAARRLR
CEEEEEECCCHHHCCHHHHHHHHHHHHHHHHHHCCEEEEEECEEEEEEEECCCHHHHHHH
QSIQEVFGFDTDLVVVNGAGLHSNTRYLIRMVRGGADLARLTGLLDRRGRPVRGLPVPIV
HHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCEEE
GGGRCCQAAAWRGAFLARGSLTEPGRSMAMEITAPGEEAAMALVGAARRLDITAKQRESR
CCCHHHHHHHHCCHHEECCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCHHHHHHCC
HVDRVTIRDGDAISAMLTRMGAHESVLAWEDRRLRREVRASANRLANFDDANLRRSARAA
CCCEEEECCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
VTASARVERALEILGDSVPDHLRAAGRLRLEHRNASLEELGKVHEPPLTKDAIAGRIRRL
HHHHHHHHHHHHHHCCCCCHHHHHHHHEEEECCCCCHHHHHCCCCCCCCHHHHHHHHHHH
LALADKTARSNGEPTTLESLPVEMRDDRG
HHHHHHHHCCCCCCCCHHHCCCCCCCCCC
>Mature Secondary Structure 
ALTLQVKNELATVPVQKLCCRRSEIAATLRFAGGIHLVQHRHLTIEAEVDTGGAARRLR
EEEEEECCCHHHCCHHHHHHHHHHHHHHHHHHCCEEEEEECEEEEEEEECCCHHHHHHH
QSIQEVFGFDTDLVVVNGAGLHSNTRYLIRMVRGGADLARLTGLLDRRGRPVRGLPVPIV
HHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCEEE
GGGRCCQAAAWRGAFLARGSLTEPGRSMAMEITAPGEEAAMALVGAARRLDITAKQRESR
CCCHHHHHHHHCCHHEECCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCHHHHHHCC
HVDRVTIRDGDAISAMLTRMGAHESVLAWEDRRLRREVRASANRLANFDDANLRRSARAA
CCCEEEECCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
VTASARVERALEILGDSVPDHLRAAGRLRLEHRNASLEELGKVHEPPLTKDAIAGRIRRL
HHHHHHHHHHHHHHCCCCCHHHHHHHHEEEECCCCCHHHHHCCCCCCCCHHHHHHHHHHH
LALADKTARSNGEPTTLESLPVEMRDDRG
HHHHHHHHCCCCCCCCHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA