Click here to switch to the map view.

The map label for this gene is traR [C]

Identifier: 50842253

GI number: 50842253

Start: 841780

End: 842220

Strand: Direct

Name: traR [C]

Synonym: PPA0766

Alternate gene names: 50842253

Gene position: 841780-842220 (Clockwise)

Preceding gene: 50842252

Following gene: 50842254

Centisome position: 32.88

GC content: 59.64

Gene sequence:

>441_bases
ATGACGACGGAGAGTTCCATGTCAGACCACGATGTCGAGGCGATTGCTGCATCCCTGCCGGTGCGTGACGGCGATGAGCC
GTGGACGGCCGATGAGATTAGCGAAATCGTCGGCACTCTTGAATCCGATGTTCAGAGGATGGGCACGGCCCTTGCCAAAG
CCGAGAATGATCTTGCTGACCTCATGAAGCAGGGGAATGACGGTGCTGGAATGGATACCATCGACGTCGGTTCCTCTCAG
TTCGAGCGCGATCAGGAGATCTCCGTCACCCGTAACGCTCGCGCTGTGTACGACCAGTCGAAGCTGGCTCTTCAACTTCT
CGACGGGGGCACCTGGGGAACCTGCGAATCCTGCGGTGAGCCGATTGGAAAAGCTCGGCTGCAGGCGTTCCCGCGGGCCA
CCATGTGCGTCAAGTGCAAGCAGCGCCAAGAGCGTCGGTGA

Upstream 100 bases:

>100_bases
AGTGAGTGCCATGGGTGTAATGTCGGCCCACAGTTCATGACACCCCCATGTAGGTGATGATATGAACGGCACACACCACG
GAGCCGGGGACAATCCCCGC

Downstream 100 bases:

>100_bases
GCTCTAACCCGACCGTGTTGGTAGGTGGGCAGCTGAAGCGCTGGCGCGTCGTCATGGTCGCCATAGGTGTGCTCGGCTAC
GGACTTGATCAATGGACGAA

Product: putative DNA-binding protein

Products: NA

Alternate protein names: Transcriptional Regulator TraR/DksA Family; DNAK Suppressor Protein; Zinc Finger DksA/TraR C4-Type; Transcriptional Regulators TraR/DksA Family

Number of amino acids: Translated: 146; Mature: 145

Protein sequence:

>146_residues
MTTESSMSDHDVEAIAASLPVRDGDEPWTADEISEIVGTLESDVQRMGTALAKAENDLADLMKQGNDGAGMDTIDVGSSQ
FERDQEISVTRNARAVYDQSKLALQLLDGGTWGTCESCGEPIGKARLQAFPRATMCVKCKQRQERR

Sequences:

>Translated_146_residues
MTTESSMSDHDVEAIAASLPVRDGDEPWTADEISEIVGTLESDVQRMGTALAKAENDLADLMKQGNDGAGMDTIDVGSSQ
FERDQEISVTRNARAVYDQSKLALQLLDGGTWGTCESCGEPIGKARLQAFPRATMCVKCKQRQERR
>Mature_145_residues
TTESSMSDHDVEAIAASLPVRDGDEPWTADEISEIVGTLESDVQRMGTALAKAENDLADLMKQGNDGAGMDTIDVGSSQF
ERDQEISVTRNARAVYDQSKLALQLLDGGTWGTCESCGEPIGKARLQAFPRATMCVKCKQRQERR

Specific function: Unknown. [C]

COG id: COG1734

COG function: function code T; DnaK suppressor protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15884; Mature: 15753

Theoretical pI: Translated: 4.28; Mature: 4.28

Prosite motif: PS01102 ZF_DKSA_1 ; PS51128 ZF_DKSA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTESSMSDHDVEAIAASLPVRDGDEPWTADEISEIVGTLESDVQRMGTALAKAENDLAD
CCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LMKQGNDGAGMDTIDVGSSQFERDQEISVTRNARAVYDQSKLALQLLDGGTWGTCESCGE
HHHCCCCCCCCCEECCCCHHHCCCCCHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHCC
PIGKARLQAFPRATMCVKCKQRQERR
HHHHHHHHHCCCHHHHHHHHHHHCCC
>Mature Secondary Structure 
TTESSMSDHDVEAIAASLPVRDGDEPWTADEISEIVGTLESDVQRMGTALAKAENDLAD
CCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LMKQGNDGAGMDTIDVGSSQFERDQEISVTRNARAVYDQSKLALQLLDGGTWGTCESCGE
HHHCCCCCCCCCEECCCCHHHCCCCCHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHCC
PIGKARLQAFPRATMCVKCKQRQERR
HHHHHHHHHCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA