| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is 50842252
Identifier: 50842252
GI number: 50842252
Start: 840492
End: 841577
Strand: Direct
Name: 50842252
Synonym: PPA0765
Alternate gene names: NA
Gene position: 840492-841577 (Clockwise)
Preceding gene: 50842251
Following gene: 50842253
Centisome position: 32.83
GC content: 61.6
Gene sequence:
>1086_bases ATGACGCTGACCCTCGAAGAGGTGCGTAAGGTTCGTTTCCCGATGGTCAAACGCCCCGGGGAGGGCTACCGCGCCATTGA AGTTGACGACTTCGTCGACAAGGTTGAAGCGGCGTTTATGACCCTCACCGATGAGAATGAGCGTCTTAAAGCCCAGGTCG AGGCTCTCAGGTCGGGTGAGCCGGGGGAACAGAGGCCGGATCAGGATCTCCTTAACGAGAACGAGCACCTGCGTGCTCAG GTTGAGGAACTCCGCTCTCAGCAGAATGGGCGCTCGGTCAATTCCGGCGAGGTTGACCGTGCCAAAGCTGCTCAGCAGGA CGCCGAGAAACGTGCCCGCCAGTTGGAGCAGGAGAGGGTCTCCCTGCAGTCCCAGATCGAGGAGCTGCGTCAGGCTGCAC GGCGTCCTGGCCAGGATATTGACCCGGCTGAGGTCGCCCGCCTGCGCAGCGAAAATGAGCGTCTTGGCGCACAGCTTCGT GATGCCCAGTCCCTTGCCGCCCGTAGCCGGACGTCCTCCGTCGCGCAGCAGCCTGCGACGACCGACGACGGGGTCAGGAA GCTCGTTGTCACCACCAGTGCTGAGGCCTCTCCGGCTGTCGTCCGGATGGTTGAGCTTGCTCTTGCGGATGCCGAGCGCG TCGTCCATGAGGCTGAGAGTGAGGCTGGCCGCAAGGTTCAGGCCGCTGAAACCAAGGCCCATGAGCTTACCGTTGATGCC CAGACCCGCGCTGAGCGTATCGAATCTAGTGCCCGTGTCAATGCTGAAAAGTTGACTTCTGACGCTAAGAGCAACGCCGA CAGGGTTAATGCTGACGCTCAGACTCGCCGCACGGAGCTCTTCCGTGAGCTTGAGGCTGAGCGCGACAACCTTGCAGGGA GGGTTGATCACTTGCGTTCCTTCGAGGCTAGCTACCGCGAGGCCCTCACTTCCCACCTGCGTGCCCAGGCCGACAACCTT GACCAGGGCGTTTTTGAGCCCGCAGAGTTGCCTGAGCTTCTCAAGTCTGAGAACCGTGTTGCTCCCGGTGGCTCCTCTAC CCCGCGTTTGGATGCCCTCATCGGACGCGGCCAGCAGCAAAACTGA
Upstream 100 bases:
>100_bases CGCCTTGGTGGAGTAGCCTTAAAGTCATCTCGTGTCCACCCCGGGCCATCATAGGTCCGCCTCACGGGTCCTGACTGTTC CCGACATCTTGGAGTGCACA
Downstream 100 bases:
>100_bases CAAGCGCACACGTCGTAAAGCTCCGTGCTCTCGGTCGAAGGATCGGGGGCATGGAGTTGTTGTCATACAGTGTTTGGGTA GAGAAGACCCACGAGGATGA
Product: putative immunogenic protein antigen 84
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 361; Mature: 360
Protein sequence:
>361_residues MTLTLEEVRKVRFPMVKRPGEGYRAIEVDDFVDKVEAAFMTLTDENERLKAQVEALRSGEPGEQRPDQDLLNENEHLRAQ VEELRSQQNGRSVNSGEVDRAKAAQQDAEKRARQLEQERVSLQSQIEELRQAARRPGQDIDPAEVARLRSENERLGAQLR DAQSLAARSRTSSVAQQPATTDDGVRKLVVTTSAEASPAVVRMVELALADAERVVHEAESEAGRKVQAAETKAHELTVDA QTRAERIESSARVNAEKLTSDAKSNADRVNADAQTRRTELFRELEAERDNLAGRVDHLRSFEASYREALTSHLRAQADNL DQGVFEPAELPELLKSENRVAPGGSSTPRLDALIGRGQQQN
Sequences:
>Translated_361_residues MTLTLEEVRKVRFPMVKRPGEGYRAIEVDDFVDKVEAAFMTLTDENERLKAQVEALRSGEPGEQRPDQDLLNENEHLRAQ VEELRSQQNGRSVNSGEVDRAKAAQQDAEKRARQLEQERVSLQSQIEELRQAARRPGQDIDPAEVARLRSENERLGAQLR DAQSLAARSRTSSVAQQPATTDDGVRKLVVTTSAEASPAVVRMVELALADAERVVHEAESEAGRKVQAAETKAHELTVDA QTRAERIESSARVNAEKLTSDAKSNADRVNADAQTRRTELFRELEAERDNLAGRVDHLRSFEASYREALTSHLRAQADNL DQGVFEPAELPELLKSENRVAPGGSSTPRLDALIGRGQQQN >Mature_360_residues TLTLEEVRKVRFPMVKRPGEGYRAIEVDDFVDKVEAAFMTLTDENERLKAQVEALRSGEPGEQRPDQDLLNENEHLRAQV EELRSQQNGRSVNSGEVDRAKAAQQDAEKRARQLEQERVSLQSQIEELRQAARRPGQDIDPAEVARLRSENERLGAQLRD AQSLAARSRTSSVAQQPATTDDGVRKLVVTTSAEASPAVVRMVELALADAERVVHEAESEAGRKVQAAETKAHELTVDAQ TRAERIESSARVNAEKLTSDAKSNADRVNADAQTRRTELFRELEAERDNLAGRVDHLRSFEASYREALTSHLRAQADNLD QGVFEPAELPELLKSENRVAPGGSSTPRLDALIGRGQQQN
Specific function: Unknown
COG id: COG3599
COG function: function code D; Cell division initiation protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40125; Mature: 39994
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLTLEEVRKVRFPMVKRPGEGYRAIEVDDFVDKVEAAFMTLTDENERLKAQVEALRSGE CCCCHHHHHHHHCCHHCCCCCCCEEEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCC PGEQRPDQDLLNENEHLRAQVEELRSQQNGRSVNSGEVDRAKAAQQDAEKRARQLEQERV CCCCCCCHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH SLQSQIEELRQAARRPGQDIDPAEVARLRSENERLGAQLRDAQSLAARSRTSSVAQQPAT HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC TDDGVRKLVVTTSAEASPAVVRMVELALADAERVVHEAESEAGRKVQAAETKAHELTVDA CCHHHHEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEHHHHHHHHHEEECH QTRAERIESSARVNAEKLTSDAKSNADRVNADAQTRRTELFRELEAERDNLAGRVDHLRS HHHHHHHHHHHHCCHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FEASYREALTSHLRAQADNLDQGVFEPAELPELLKSENRVAPGGSSTPRLDALIGRGQQQ HHHHHHHHHHHHHHHHHCCCHHCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCCC N C >Mature Secondary Structure TLTLEEVRKVRFPMVKRPGEGYRAIEVDDFVDKVEAAFMTLTDENERLKAQVEALRSGE CCCHHHHHHHHCCHHCCCCCCCEEEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCC PGEQRPDQDLLNENEHLRAQVEELRSQQNGRSVNSGEVDRAKAAQQDAEKRARQLEQERV CCCCCCCHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH SLQSQIEELRQAARRPGQDIDPAEVARLRSENERLGAQLRDAQSLAARSRTSSVAQQPAT HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC TDDGVRKLVVTTSAEASPAVVRMVELALADAERVVHEAESEAGRKVQAAETKAHELTVDA CCHHHHEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEHHHHHHHHHEEECH QTRAERIESSARVNAEKLTSDAKSNADRVNADAQTRRTELFRELEAERDNLAGRVDHLRS HHHHHHHHHHHHCCHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FEASYREALTSHLRAQADNLDQGVFEPAELPELLKSENRVAPGGSSTPRLDALIGRGQQQ HHHHHHHHHHHHHHHHHCCCHHCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCCC N C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA