| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is 50842205
Identifier: 50842205
GI number: 50842205
Start: 788491
End: 789606
Strand: Reverse
Name: 50842205
Synonym: PPA0717
Alternate gene names: NA
Gene position: 789606-788491 (Counterclockwise)
Preceding gene: 50842208
Following gene: 50842204
Centisome position: 30.84
GC content: 62.19
Gene sequence:
>1116_bases GTGTCCTGCAAGAAGAAAGCTTCCCGCAAGACCGCCGCCGCAAGCAGCCCCAGCACGCTCAAGGAGCAGCGTGCCCAGGC GCTGGAGACCGCCGCCGCGTACCTCGCCGCCGCCCAGGACAAGGCTGCTCCGCTGGCCGCGCAAGTCAACGACAAGCTCG GTCCCCTGACTGATCAGATCTCGGACAAGCTTGGTCCCCTCTCTGATCAGGCTGTTGAGGCTAGCAAAAAGGCCCTTGAC GCTTCGAAGGAGTACACCCAGGAGAAGGTCGTTCCAGCCCTTCATCAGGCTTATGACACCTTCCAGAAGGATGTCTTGCC TGACCTTGAGGAGCGTGCCGAGAAGGTCATCTCTCACCCAGCCGTTGAGGAAGCCACCCGCCGTGGACAGGCTGCCTTCT CAGCCCTCAAAGGCGAGTCGACCGAGCTGGCGGCCAAAGCCGGCATCGAGACGAAATCAGTCAAGAAGGCCAAGCACCGC AGCAAATTCGGCAAGGTGTTCGGCACTCTCGCCGTCCTCGGCGGCATTTCTGCTGCGGTAGTTGTGGCCAGCCGCCGCTT CCTGAGCTCTTCCGACGACGGTTGGACAGCTCATGAGCCCAAGGTCACCTACTCTTGGACCCCTGGCGATAAGGACAACA CCGACAGCCCCGCCCCGAACACTGACGAGAAACTCAAGGACACGCCATCCCCCAAACCCGAGACCAGCCACGGTTCGAAG CCCGTTGCCAAACCGGCAGATAAGCCCGAGCCGAAGGAGGACAAGTCGGTTCCGGCTGACCCGGTCGCCGCCATGGCCGA TGAGGGTGGACCGGCTGCTGCTGCATCGGAGACTACCGCCGAGACCACTGCTTTCGTTGATGAAGGTGCCCGCTCCGAGA CCACGACCAAGGATGGTGCAGTCAAGGCTCCTGAACAGGGCACGAAGGATGAGGGCAATAAGGCCACCTCATACGTCGGG GATAACCCGCCCGAGAGCTACGTGATTAAGGGCAACGACCGCTCGATGAAGTACCACGTCCCGGGCTCGGGTGGTTACGA CCGCACCATTGCTGATGTGTGGTTTGCCACCGAGGAGGCTGCGCAGGCTGCCGGGTTCACCAAGGCCCAGCGCTGA
Upstream 100 bases:
>100_bases GCCGCCGTTTGAGCCCCGAATCTCTGGTCTATGGACCATTTGGTCGATACCGTGGAAGGTGCTCGATCACGAGCCATATC CCATACGAATTGGAGGAACC
Downstream 100 bases:
>100_bases GAGCCATTCCCGCCATCTCGACGGGGCTCGCCACCATGGTGGCGAGCCCCGTCGTCGCATATTTTCGTGCCAGCGCGTCA GGGGCGGAATGACAACGTTC
Product: putative regulatory protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 371; Mature: 370
Protein sequence:
>371_residues MSCKKKASRKTAAASSPSTLKEQRAQALETAAAYLAAAQDKAAPLAAQVNDKLGPLTDQISDKLGPLSDQAVEASKKALD ASKEYTQEKVVPALHQAYDTFQKDVLPDLEERAEKVISHPAVEEATRRGQAAFSALKGESTELAAKAGIETKSVKKAKHR SKFGKVFGTLAVLGGISAAVVVASRRFLSSSDDGWTAHEPKVTYSWTPGDKDNTDSPAPNTDEKLKDTPSPKPETSHGSK PVAKPADKPEPKEDKSVPADPVAAMADEGGPAAAASETTAETTAFVDEGARSETTTKDGAVKAPEQGTKDEGNKATSYVG DNPPESYVIKGNDRSMKYHVPGSGGYDRTIADVWFATEEAAQAAGFTKAQR
Sequences:
>Translated_371_residues MSCKKKASRKTAAASSPSTLKEQRAQALETAAAYLAAAQDKAAPLAAQVNDKLGPLTDQISDKLGPLSDQAVEASKKALD ASKEYTQEKVVPALHQAYDTFQKDVLPDLEERAEKVISHPAVEEATRRGQAAFSALKGESTELAAKAGIETKSVKKAKHR SKFGKVFGTLAVLGGISAAVVVASRRFLSSSDDGWTAHEPKVTYSWTPGDKDNTDSPAPNTDEKLKDTPSPKPETSHGSK PVAKPADKPEPKEDKSVPADPVAAMADEGGPAAAASETTAETTAFVDEGARSETTTKDGAVKAPEQGTKDEGNKATSYVG DNPPESYVIKGNDRSMKYHVPGSGGYDRTIADVWFATEEAAQAAGFTKAQR >Mature_370_residues SCKKKASRKTAAASSPSTLKEQRAQALETAAAYLAAAQDKAAPLAAQVNDKLGPLTDQISDKLGPLSDQAVEASKKALDA SKEYTQEKVVPALHQAYDTFQKDVLPDLEERAEKVISHPAVEEATRRGQAAFSALKGESTELAAKAGIETKSVKKAKHRS KFGKVFGTLAVLGGISAAVVVASRRFLSSSDDGWTAHEPKVTYSWTPGDKDNTDSPAPNTDEKLKDTPSPKPETSHGSKP VAKPADKPEPKEDKSVPADPVAAMADEGGPAAAASETTAETTAFVDEGARSETTTKDGAVKAPEQGTKDEGNKATSYVGD NPPESYVIKGNDRSMKYHVPGSGGYDRTIADVWFATEEAAQAAGFTKAQR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39085; Mature: 38954
Theoretical pI: Translated: 6.29; Mature: 6.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSCKKKASRKTAAASSPSTLKEQRAQALETAAAYLAAAQDKAAPLAAQVNDKLGPLTDQI CCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHH SDKLGPLSDQAVEASKKALDASKEYTQEKVVPALHQAYDTFQKDVLPDLEERAEKVISHP HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCC AVEEATRRGQAAFSALKGESTELAAKAGIETKSVKKAKHRSKFGKVFGTLAVLGGISAAV HHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VVASRRFLSSSDDGWTAHEPKVTYSWTPGDKDNTDSPAPNTDEKLKDTPSPKPETSHGSK HHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCC PVAKPADKPEPKEDKSVPADPVAAMADEGGPAAAASETTAETTAFVDEGARSETTTKDGA CCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCC VKAPEQGTKDEGNKATSYVGDNPPESYVIKGNDRSMKYHVPGSGGYDRTIADVWFATEEA CCCCCCCCCCCCCCHHCCCCCCCCCCEEEECCCCEEEEECCCCCCCCHHHHHHHHHHHHH AQAAGFTKAQR HHHHCCHHCCC >Mature Secondary Structure SCKKKASRKTAAASSPSTLKEQRAQALETAAAYLAAAQDKAAPLAAQVNDKLGPLTDQI CCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHH SDKLGPLSDQAVEASKKALDASKEYTQEKVVPALHQAYDTFQKDVLPDLEERAEKVISHP HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCC AVEEATRRGQAAFSALKGESTELAAKAGIETKSVKKAKHRSKFGKVFGTLAVLGGISAAV HHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VVASRRFLSSSDDGWTAHEPKVTYSWTPGDKDNTDSPAPNTDEKLKDTPSPKPETSHGSK HHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCC PVAKPADKPEPKEDKSVPADPVAAMADEGGPAAAASETTAETTAFVDEGARSETTTKDGA CCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCC VKAPEQGTKDEGNKATSYVGDNPPESYVIKGNDRSMKYHVPGSGGYDRTIADVWFATEEA CCCCCCCCCCCCCCHHCCCCCCCCCCEEEECCCCEEEEECCCCCCCCHHHHHHHHHHHHH AQAAGFTKAQR HHHHCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA