| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is 50842204
Identifier: 50842204
GI number: 50842204
Start: 787718
End: 788263
Strand: Reverse
Name: 50842204
Synonym: PPA0716
Alternate gene names: NA
Gene position: 788263-787718 (Counterclockwise)
Preceding gene: 50842205
Following gene: 50842203
Centisome position: 30.79
GC content: 60.99
Gene sequence:
>546_bases ATGCCGGTTAGAAGAGTGTTCTGCCCACATCGTGCGGACACAAGCCACGACAGAAAGGCCTGTCACATGATCACTATGGA TCTCGAGTCCTCGAAGACGTCGACTGCATGGGTCGACGCCCGCTTTTTCTCGCTCCATGTCCGTTCCCTCGTCCATGAAT GCCGCGTTCCGTGGCGTGTCGTCGCCCTGCTCGCGCATGTCCCCAGTCGAATCGTCCAACGACTCGCTGGCCAGGGGGAC CGTCCAATTCACCGCATCCGCGTCATCGACGCCGTGCGCATCCTGCATATCAGTATCGACGACATCAACGCAGCACGTGA ACGCATCGTGCCAGCAGGAAGCACGCGCGCTCGGCTCCTCGCCCTCCACAAGGCCGGCTGTGACATTGCTGAGATCGCCA CCATGCTGGACGTAACGATGTCCTACGCCGCGAACCTCATGAGCGGGGAAGAACAGATGTGCACTGAGATGACGCGACTA CGCAGTCGGGCCGCGTGCGAAGCTCGCGGCCTGCTCTCCACTGCCGAATCCATGGCGTCCATGTGA
Upstream 100 bases:
>100_bases TAGCGTTAATTGTGCTATGTATCACAATAAGTGACACGATACGTAACAGTTTTATAACAACACGCTATCGATGTCACGAT AAGTGCCCGCGGCAGCACTT
Downstream 100 bases:
>100_bases GTCGAGCCCATGTGGATCATCCTCGGCTCCGCGGTGGCGTGTGTCCTGGCGCTGTGGCATCTACGCGTCACGGTCCCGAA TCTCGTCGAGCCAACCGTCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 181; Mature: 180
Protein sequence:
>181_residues MPVRRVFCPHRADTSHDRKACHMITMDLESSKTSTAWVDARFFSLHVRSLVHECRVPWRVVALLAHVPSRIVQRLAGQGD RPIHRIRVIDAVRILHISIDDINAARERIVPAGSTRARLLALHKAGCDIAEIATMLDVTMSYAANLMSGEEQMCTEMTRL RSRAACEARGLLSTAESMASM
Sequences:
>Translated_181_residues MPVRRVFCPHRADTSHDRKACHMITMDLESSKTSTAWVDARFFSLHVRSLVHECRVPWRVVALLAHVPSRIVQRLAGQGD RPIHRIRVIDAVRILHISIDDINAARERIVPAGSTRARLLALHKAGCDIAEIATMLDVTMSYAANLMSGEEQMCTEMTRL RSRAACEARGLLSTAESMASM >Mature_180_residues PVRRVFCPHRADTSHDRKACHMITMDLESSKTSTAWVDARFFSLHVRSLVHECRVPWRVVALLAHVPSRIVQRLAGQGDR PIHRIRVIDAVRILHISIDDINAARERIVPAGSTRARLLALHKAGCDIAEIATMLDVTMSYAANLMSGEEQMCTEMTRLR SRAACEARGLLSTAESMASM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20227; Mature: 20096
Theoretical pI: Translated: 9.21; Mature: 9.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 5.5 %Met (Translated Protein) 8.8 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 8.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVRRVFCPHRADTSHDRKACHMITMDLESSKTSTAWVDARFFSLHVRSLVHECRVPWRV CCCCCCCCCCCCCCCCCHHHHHEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHH VALLAHVPSRIVQRLAGQGDRPIHRIRVIDAVRILHISIDDINAARERIVPAGSTRARLL HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHEEEEHHHHHHHHHHCCCCCCHHHHHH ALHKAGCDIAEIATMLDVTMSYAANLMSGEEQMCTEMTRLRSRAACEARGLLSTAESMAS HHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC M C >Mature Secondary Structure PVRRVFCPHRADTSHDRKACHMITMDLESSKTSTAWVDARFFSLHVRSLVHECRVPWRV CCCCCCCCCCCCCCCCHHHHHEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHH VALLAHVPSRIVQRLAGQGDRPIHRIRVIDAVRILHISIDDINAARERIVPAGSTRARLL HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHEEEEHHHHHHHHHHCCCCCCHHHHHH ALHKAGCDIAEIATMLDVTMSYAANLMSGEEQMCTEMTRLRSRAACEARGLLSTAESMAS HHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC M C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA