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The map label for this gene is ctaF [H]

Identifier: 50842191

GI number: 50842191

Start: 774262

End: 774657

Strand: Direct

Name: ctaF [H]

Synonym: PPA0703

Alternate gene names: 50842191

Gene position: 774262-774657 (Clockwise)

Preceding gene: 50842190

Following gene: 50842194

Centisome position: 30.24

GC content: 61.36

Gene sequence:

>396_bases
ATGAAACCGGAACGTTGGGTATTTGGCGGGCTCGGCCTGTTCTACCTCGTCGTTACCCCGGTGTACTGGTTCACGGCACA
CGAAGTGGCCGGCACTTGGGTGCTCGGGCTGTCGGCGGCGATGGCCCTGATGGTGTTTTTCTACGTCCAGGTCATCGCCA
AGAAGATCAATCCTCGGCCCTCCGACGAGAAGGATGCCGAGGTGATCGACGGGGCTGGTCCGGTCGGTTTCTTCCCGCCA
CAGAGTATCTGGCCGTTCTGGTGCGCGCTCGTTGTCGCCATCATGTGCCTCGGCCCGATCTTCGGCTGGTGGATCTCTCT
GCTCGGGCTGGGCATTGGTATCTGGGCCGCCTCGGGTTGGGCTTTTGAGTACTACCGCGGGGATTACGCTCACTGA

Upstream 100 bases:

>100_bases
CTCCGGCCTTCGACATCAATCATCCGGAGGCCGCTCTGGCCCCCGAGACTGGGGAAGCTAATCCGCGCGAACTCGTCCAC
TCCGGTAAGGAGGATGCCTG

Downstream 100 bases:

>100_bases
CCGTCCATCGCCGCCACGGATCAGACCGCGGCGGCGATGTCCGTGTTTGGGCTAGATCAGGGCATCGGCGGTACGCTCTC
GTGCCCTGATCGCGCGGAGT

Product: hypothetical protein

Products: NA

Alternate protein names: Cytochrome aa3 subunit 4; Cytochrome c oxidase polypeptide IV [H]

Number of amino acids: Translated: 131; Mature: 131

Protein sequence:

>131_residues
MKPERWVFGGLGLFYLVVTPVYWFTAHEVAGTWVLGLSAAMALMVFFYVQVIAKKINPRPSDEKDAEVIDGAGPVGFFPP
QSIWPFWCALVVAIMCLGPIFGWWISLLGLGIGIWAASGWAFEYYRGDYAH

Sequences:

>Translated_131_residues
MKPERWVFGGLGLFYLVVTPVYWFTAHEVAGTWVLGLSAAMALMVFFYVQVIAKKINPRPSDEKDAEVIDGAGPVGFFPP
QSIWPFWCALVVAIMCLGPIFGWWISLLGLGIGIWAASGWAFEYYRGDYAH
>Mature_131_residues
MKPERWVFGGLGLFYLVVTPVYWFTAHEVAGTWVLGLSAAMALMVFFYVQVIAKKINPRPSDEKDAEVIDGAGPVGFFPP
QSIWPFWCALVVAIMCLGPIFGWWISLLGLGIGIWAASGWAFEYYRGDYAH

Specific function: Part of cytochrome c oxidase, its function is unknown [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c oxidase bacterial subunit CtaF family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021050 [H]

Pfam domain/function: PF12270 Cyt_c_ox_IV [H]

EC number: =1.9.3.1 [H]

Molecular weight: Translated: 14623; Mature: 14623

Theoretical pI: Translated: 5.62; Mature: 5.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPERWVFGGLGLFYLVVTPVYWFTAHEVAGTWVLGLSAAMALMVFFYVQVIAKKINPRP
CCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
SDEKDAEVIDGAGPVGFFPPQSIWPFWCALVVAIMCLGPIFGWWISLLGLGIGIWAASGW
CCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
AFEYYRGDYAH
CHHHCCCCCCC
>Mature Secondary Structure
MKPERWVFGGLGLFYLVVTPVYWFTAHEVAGTWVLGLSAAMALMVFFYVQVIAKKINPRP
CCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
SDEKDAEVIDGAGPVGFFPPQSIWPFWCALVVAIMCLGPIFGWWISLLGLGIGIWAASGW
CCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
AFEYYRGDYAH
CHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA