| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is yxlA [H]
Identifier: 50842106
GI number: 50842106
Start: 681082
End: 682545
Strand: Reverse
Name: yxlA [H]
Synonym: PPA0619
Alternate gene names: 50842106
Gene position: 682545-681082 (Counterclockwise)
Preceding gene: 50842108
Following gene: 50842105
Centisome position: 26.66
GC content: 58.2
Gene sequence:
>1464_bases ATGACGCAGACCGCCACCAAAACGAATGCGACGACGCACAAGGGCATCGAGACAACCGGAATCGAGATCGTCAAAGAATC ACAGCGCACCGCACAGCCCCAGGACCTTTTCCTTCCCTGGTTCGCCTCAAATGTCTCGGTCTTTGGCATGAGCTATGGAG CCTTCATGTTGGGATTCGGGGTGTCCTTCTGGCAGGCGATAGCCGCCACCCTCGTCGGCGTCATCGTCTCTTTCGGGTTC TGCGGCATTATCGCGATCGCCGGTAAACGCGGCTCCGCACCAACGATGGTGCTGTCTCGGGCAGCCTTTGGTACCCAGGG CAACAAGATCCCCGGGGTCATCTCCTGGATGACCTCGATTGGTTGGGAAACATCTCTCGCTATTACAGCCGTCTTAGCGA CGACGACGATCTTCCGCCGACTGGGCTGGAGCTCCGGGAACTCGGTCAAGATCTGCGCCACTATCATCGTGGCCTTTCTC ATTGTCGGCGGTGCTGTGGCTGGTTATCACATCATCATGAAGTTGCAGGCCGTTTTGACCTGGATTACCGGTATCCTTAC CGTGATTTATCTAGTGATGGCGGTCAGCCATATCGACTGGCACGCCGCAACATCTTTGCCTGCGGCATCCTTCCCAGCCT TCGTCGGCACGCTCACCCTCATCATGACTGGCACCGGGCTGGGCTGGACGAATATCGCTGCCGACTGGTCACGTTACCAG TCGCGCACATCTCCCGGGTTCGCCATCGCCTTCTGGAATGTCTTTGGGGCCTCTTTGCCGCTCGTCATCCTCATTACCGG TGGATTGCTCTTAGCTGCATCCTCAAAAAATCTATCCGACGCCATTGGGGCCGATCCCATTGGCGCGCTAGCAACCATCC TGCCGACGTGGTTCCTCATCCCGTTCTTGTTGGCTGCGATCCTCTCCCTGTTGGCCGGTGCCATCAACGGCATCTATTCG TCTGGACTCACCTTGCTCACCCTGGGAATCCGAGTCCCACGCCCAGCAGCTTCTCTCATTGACGAGACGATTCTCACCAT CGGGACCCTGTACGTCGTCTTCGTGGCTCCGAACTTTATCTCCCCCTTCCAGTCCTTCTTGGTGACGCTGGGTGTGCCGC TCTCAGGATGGACCGGCATCATGATGGCCGATATCACCCTGCGCCGCCGTCCCTACGACGAGGCCGATCTCTTCAATGGC TCTGGGCGCTACGGTCATTTCGACCCCATCTCAATCATCACCTTCGTCATCGTGACCGTCATCGGGTGGGGATTGGTCGT CAACACCTACGAGGGCGTCAATTGGAACGACTGGCAGGGATTTCTGCTTGGGCCCATTGGATTGGGTGGGCGTGAAGGTG ATTGGGCCCACGCCAACCTTGGAGTATTCGGGGCCCTCGTCCTCGGCTATGTTGTTACCCTCATCGCTCGGCGCGGCACC GTGCGTCGTCAGGAGTCACGATGA
Upstream 100 bases:
>100_bases TCGATGCTCATGACATGACTGCAGCCCGAGCAGACAACAACGCACGTACACAGCCCAACGATGTAAGAATATCGCTGCGA ATACCTCGAGAGGACAGCTC
Downstream 100 bases:
>100_bases GCCAGACGTGGCTAATTGTCATTGACCCCCAGACAATCTTCGCGTCCCCCACGTCCCCGTGGGGCTCTCCTGCCTTCCCC ACTATCATCGACCCGATAGA
Product: transport-protein, putative permease for cytosine/purines
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 487; Mature: 486
Protein sequence:
>487_residues MTQTATKTNATTHKGIETTGIEIVKESQRTAQPQDLFLPWFASNVSVFGMSYGAFMLGFGVSFWQAIAATLVGVIVSFGF CGIIAIAGKRGSAPTMVLSRAAFGTQGNKIPGVISWMTSIGWETSLAITAVLATTTIFRRLGWSSGNSVKICATIIVAFL IVGGAVAGYHIIMKLQAVLTWITGILTVIYLVMAVSHIDWHAATSLPAASFPAFVGTLTLIMTGTGLGWTNIAADWSRYQ SRTSPGFAIAFWNVFGASLPLVILITGGLLLAASSKNLSDAIGADPIGALATILPTWFLIPFLLAAILSLLAGAINGIYS SGLTLLTLGIRVPRPAASLIDETILTIGTLYVVFVAPNFISPFQSFLVTLGVPLSGWTGIMMADITLRRRPYDEADLFNG SGRYGHFDPISIITFVIVTVIGWGLVVNTYEGVNWNDWQGFLLGPIGLGGREGDWAHANLGVFGALVLGYVVTLIARRGT VRRQESR
Sequences:
>Translated_487_residues MTQTATKTNATTHKGIETTGIEIVKESQRTAQPQDLFLPWFASNVSVFGMSYGAFMLGFGVSFWQAIAATLVGVIVSFGF CGIIAIAGKRGSAPTMVLSRAAFGTQGNKIPGVISWMTSIGWETSLAITAVLATTTIFRRLGWSSGNSVKICATIIVAFL IVGGAVAGYHIIMKLQAVLTWITGILTVIYLVMAVSHIDWHAATSLPAASFPAFVGTLTLIMTGTGLGWTNIAADWSRYQ SRTSPGFAIAFWNVFGASLPLVILITGGLLLAASSKNLSDAIGADPIGALATILPTWFLIPFLLAAILSLLAGAINGIYS SGLTLLTLGIRVPRPAASLIDETILTIGTLYVVFVAPNFISPFQSFLVTLGVPLSGWTGIMMADITLRRRPYDEADLFNG SGRYGHFDPISIITFVIVTVIGWGLVVNTYEGVNWNDWQGFLLGPIGLGGREGDWAHANLGVFGALVLGYVVTLIARRGT VRRQESR >Mature_486_residues TQTATKTNATTHKGIETTGIEIVKESQRTAQPQDLFLPWFASNVSVFGMSYGAFMLGFGVSFWQAIAATLVGVIVSFGFC GIIAIAGKRGSAPTMVLSRAAFGTQGNKIPGVISWMTSIGWETSLAITAVLATTTIFRRLGWSSGNSVKICATIIVAFLI VGGAVAGYHIIMKLQAVLTWITGILTVIYLVMAVSHIDWHAATSLPAASFPAFVGTLTLIMTGTGLGWTNIAADWSRYQS RTSPGFAIAFWNVFGASLPLVILITGGLLLAASSKNLSDAIGADPIGALATILPTWFLIPFLLAAILSLLAGAINGIYSS GLTLLTLGIRVPRPAASLIDETILTIGTLYVVFVAPNFISPFQSFLVTLGVPLSGWTGIMMADITLRRRPYDEADLFNGS GRYGHFDPISIITFVIVTVIGWGLVVNTYEGVNWNDWQGFLLGPIGLGGREGDWAHANLGVFGALVLGYVVTLIARRGTV RRQESR
Specific function: Unknown
COG id: COG1457
COG function: function code F; Purine-cytosine permease and related proteins
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the purine-cytosine permease family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001248 [H]
Pfam domain/function: PF02133 Transp_cyt_pur [H]
EC number: NA
Molecular weight: Translated: 51802; Mature: 51671
Theoretical pI: Translated: 9.66; Mature: 9.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQTATKTNATTHKGIETTGIEIVKESQRTAQPQDLFLPWFASNVSVFGMSYGAFMLGFG CCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEECHHHHCCCEEEEHHHHHHHHHHH VSFWQAIAATLVGVIVSFGFCGIIAIAGKRGSAPTMVLSRAAFGTQGNKIPGVISWMTSI HHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHC GWETSLAITAVLATTTIFRRLGWSSGNSVKICATIIVAFLIVGGAVAGYHIIMKLQAVLT CCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WITGILTVIYLVMAVSHIDWHAATSLPAASFPAFVGTLTLIMTGTGLGWTNIAADWSRYQ HHHHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH SRTSPGFAIAFWNVFGASLPLVILITGGLLLAASSKNLSDAIGADPIGALATILPTWFLI CCCCCCEEEEEHHHHCCCCCEEEEECCCEEEEECCCCCHHHCCCCHHHHHHHHHHHHHHH PFLLAAILSLLAGAINGIYSSGLTLLTLGIRVPRPAASLIDETILTIGTLYVVFVAPNFI HHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHH SPFQSFLVTLGVPLSGWTGIMMADITLRRRPYDEADLFNGSGRYGHFDPISIITFVIVTV HHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHH IGWGLVVNTYEGVNWNDWQGFLLGPIGLGGREGDWAHANLGVFGALVLGYVVTLIARRGT HHHHHEEECCCCCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC VRRQESR CCCCCCC >Mature Secondary Structure TQTATKTNATTHKGIETTGIEIVKESQRTAQPQDLFLPWFASNVSVFGMSYGAFMLGFG CCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEECHHHHCCCEEEEHHHHHHHHHHH VSFWQAIAATLVGVIVSFGFCGIIAIAGKRGSAPTMVLSRAAFGTQGNKIPGVISWMTSI HHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHC GWETSLAITAVLATTTIFRRLGWSSGNSVKICATIIVAFLIVGGAVAGYHIIMKLQAVLT CCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WITGILTVIYLVMAVSHIDWHAATSLPAASFPAFVGTLTLIMTGTGLGWTNIAADWSRYQ HHHHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH SRTSPGFAIAFWNVFGASLPLVILITGGLLLAASSKNLSDAIGADPIGALATILPTWFLI CCCCCCEEEEEHHHHCCCCCEEEEECCCEEEEECCCCCHHHCCCCHHHHHHHHHHHHHHH PFLLAAILSLLAGAINGIYSSGLTLLTLGIRVPRPAASLIDETILTIGTLYVVFVAPNFI HHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHH SPFQSFLVTLGVPLSGWTGIMMADITLRRRPYDEADLFNGSGRYGHFDPISIITFVIVTV HHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHH IGWGLVVNTYEGVNWNDWQGFLLGPIGLGGREGDWAHANLGVFGALVLGYVVTLIARRGT HHHHHEEECCCCCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC VRRQESR CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8969509; 9384377 [H]