Click here to switch to the map view.

The map label for this gene is ohrR [H]

Identifier: 50842065

GI number: 50842065

Start: 640458

End: 641075

Strand: Reverse

Name: ohrR [H]

Synonym: PPA0579

Alternate gene names: 50842065

Gene position: 641075-640458 (Counterclockwise)

Preceding gene: 50842079

Following gene: 50842064

Centisome position: 25.04

GC content: 59.22

Gene sequence:

>618_bases
GTGACCATTGCGGCCGGCACCGGTAGCAATAGCCTCGGTGGTGTAGACGGGCTCGATCTCGATCATGGTGTCTCCTTACT
CGCTGGACGAATGTGCGCTGACGTTTCTGTCGTGCAGCGTTATAAGAAACATAGCGCGCAACTAAGTTGTGTCCAATCTT
GTTGTGCATCTAATATCCTCCCCGTTGTGCACGATCAAACGCTCGACCTCGACGACCAATTCTGTTTCTCCCTCTACCGA
GCTAGCAGGGCGGTCACGCGCGCCTACCGACCGCTGCTCGAAGGCATCGGTCTCACCTACCCCCAGTACCTAGCCATGCT
GGTGTTGTGGCACGCTGAGGGTCCGGTAGGCGTCAATGACATCGGAACGCGATTACACCTCGATAGCGGCACCCTGACTC
CCCTATTGCGCCGCCTGGAAGACGCCGGCTTCATCACCAGAGCCTGGAGCAACGACGACGAACGGCGGCGCATCATCAGT
CTCACAGAGGGAGGGCGCTCGTTACGTCACCAGGCCGCCGGTTTACCTGAGCGGATGCTAGCGCTGTATCCCACCCCGCC
ACAGGAGCTGGCCCAGGTAAAGGCATTTCTCGACGACCTGGCCACCCAGCTTGAGTGA

Upstream 100 bases:

>100_bases
CAGCCGCAAACAGCTGCTCCGGGTTCGTGCCCTTACCGCTACCACCCATCTCGACGGGAACAGCCAGATCCTCAGACACG
CGACCGTCGGGACTTTGGAC

Downstream 100 bases:

>100_bases
TGACTCAATGCCCCATGCGAGACGATTAGACGACATTGTCAGCATGGGATTCACGAGCCACTCTCGGTGCCCGAACCCCA
ATTGCGGTATGACGAAAGGT

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 205; Mature: 204

Protein sequence:

>205_residues
MTIAAGTGSNSLGGVDGLDLDHGVSLLAGRMCADVSVVQRYKKHSAQLSCVQSCCASNILPVVHDQTLDLDDQFCFSLYR
ASRAVTRAYRPLLEGIGLTYPQYLAMLVLWHAEGPVGVNDIGTRLHLDSGTLTPLLRRLEDAGFITRAWSNDDERRRIIS
LTEGGRSLRHQAAGLPERMLALYPTPPQELAQVKAFLDDLATQLE

Sequences:

>Translated_205_residues
MTIAAGTGSNSLGGVDGLDLDHGVSLLAGRMCADVSVVQRYKKHSAQLSCVQSCCASNILPVVHDQTLDLDDQFCFSLYR
ASRAVTRAYRPLLEGIGLTYPQYLAMLVLWHAEGPVGVNDIGTRLHLDSGTLTPLLRRLEDAGFITRAWSNDDERRRIIS
LTEGGRSLRHQAAGLPERMLALYPTPPQELAQVKAFLDDLATQLE
>Mature_204_residues
TIAAGTGSNSLGGVDGLDLDHGVSLLAGRMCADVSVVQRYKKHSAQLSCVQSCCASNILPVVHDQTLDLDDQFCFSLYRA
SRAVTRAYRPLLEGIGLTYPQYLAMLVLWHAEGPVGVNDIGTRLHLDSGTLTPLLRRLEDAGFITRAWSNDDERRRIISL
TEGGRSLRHQAAGLPERMLALYPTPPQELAQVKAFLDDLATQLE

Specific function: Organic peroxide sensor. Represses the expression of the peroxide-inducible gene ohrA by cooperative binding to two inverted repeat elements [H]

COG id: COG1846

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000835
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01047 MarR [H]

EC number: NA

Molecular weight: Translated: 22418; Mature: 22287

Theoretical pI: Translated: 6.23; Mature: 6.23

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIAAGTGSNSLGGVDGLDLDHGVSLLAGRMCADVSVVQRYKKHSAQLSCVQSCCASNIL
CEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PVVHDQTLDLDDQFCFSLYRASRAVTRAYRPLLEGIGLTYPQYLAMLVLWHAEGPVGVND
CHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCC
IGTRLHLDSGTLTPLLRRLEDAGFITRAWSNDDERRRIISLTEGGRSLRHQAAGLPERML
CCCEEEECCCCHHHHHHHHHHCCCEEECCCCCCHHHHEEEHHHCCHHHHHHHCCCHHHHH
ALYPTPPQELAQVKAFLDDLATQLE
EECCCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TIAAGTGSNSLGGVDGLDLDHGVSLLAGRMCADVSVVQRYKKHSAQLSCVQSCCASNIL
EEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PVVHDQTLDLDDQFCFSLYRASRAVTRAYRPLLEGIGLTYPQYLAMLVLWHAEGPVGVND
CHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCC
IGTRLHLDSGTLTPLLRRLEDAGFITRAWSNDDERRRIISLTEGGRSLRHQAAGLPERML
CCCEEEECCCCHHHHHHHHHHCCCEEECCCCCCHHHHEEEHHHCCHHHHHHHCCCHHHHH
ALYPTPPQELAQVKAFLDDLATQLE
EECCCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377; 11418552; 11983871 [H]