Definition Propionibacterium acnes KPA171202, complete genome.
Accession NC_006085
Length 2,560,265

Click here to switch to the map view.

The map label for this gene is 50841734

Identifier: 50841734

GI number: 50841734

Start: 295033

End: 296520

Strand: Direct

Name: 50841734

Synonym: PPA0242

Alternate gene names: NA

Gene position: 295033-296520 (Clockwise)

Preceding gene: 50841733

Following gene: 50841735

Centisome position: 11.52

GC content: 62.63

Gene sequence:

>1488_bases
ATGACGACGGGTTGTCGTTCGGGCAGCACCGAACCGTTGTACTTCGAGTTGGCATGGACGGCTGCTCGACCGGTTCCAGC
CGACCTGCGCACAACCGTCGCCGCCGGCGGGGCCCGTCGGACCATTGAGTGCAAGGTCACCTTGCTGGACTCCCCGGACC
ACCGGCTGCTGAGGTCGGGGATTGTCGTCGCTCACCGCGTCGTGGATGGACTGGGGGAGTGGTACATGGATGCTCCCGAG
TGGTCCCCGTGGTTACCGGTTGCTCGGTCAGTAGCCCTCGATGCCGCCGGTGAACTGCCTCAAGATTTCACTTGTCTGGT
CCGTCCCTTCCTGCGCGGGGCGACCCTCTGCCCGGTCGCGGCCCTGTCCTGGGAGCGTAACGAGACGATCCTGGAGGCGC
TCGATTGCACCAAACTGGCCCTCATCCGCGACGACCGCATTGCCGTCGTCCAGTCAGGAGTGACGACATCGCGGGTTCGC
GAGCTGACGATTACCCCACAACGGGGTCTCGCTGAGGGGCAGCGGGAGTGGCTCACCAACCGCATCCTGGCTCTGGATGG
TGTGCCAGTCTCTCGGCACCCTTCAGTTTTGCGACGTCTTGGCCCAGGGGCTGGCGCGCTCACCGACTACCCGCGTCCGC
ACCTTCATCATGGTGCTGGATTACAGACCTGGGTATCGGCTCAGCTGGCCGGACAGTTGCGGGACGTTATCGAGGCTGAT
CTGGCGGTTCGTTGCCAGGGGATGGATTTAGGCCCCACCGAGACCACACGGACGGAGCCGCGCGTTCTTCCAGAGTCCCC
AGATCGCACTGATCTTGTGGGGATGGGATACGACCCGGTAACGATGTCGACCCCCAGTATCCACGACGGGAACCACGGGT
CGATTCGGCCGCTTCAGAAGGCGATTCGGGCGCTGTCGGAGACTCTGGACGCAATGTCGGGTCTGCTCGATCAGGCTTGG
GTCGAACGTGCCCAGAACTTGTGTTTGCGGGTGATGGGTCTGGATCCCGGTCACATCAGTATCCATAACCTTTCTCGAGA
GTATTACCAGTTGCTCGAGGAGATCACAGCGGCGGCGCGGTCCCCGCGTCTCACTGTTGATCCTGACCAGCCCGCCCGTC
CCACCATGAAGCGCGTGCTTCGGAAGTCGGTTGCTGACGCAGTGGCCAAATGCGATGACGTTGAGGATGTGCAGGGGTGG
TCAACAGCCGAGGTCGCGGTTCGCCACGCAGCAGCGGTCGCCGGAATTCTCGACACGGGTCGCGCCGGAAAAGTGGCTAA
GCGGCTGCGCCCCGTCGTCAAGGAGATAGCGCAGACCAAACGCAGCGTGACCGAGGCTGTTGACGTCTCCAAGATGTCTC
CTCAGGAAGCTTTTGAGGCCGGACGCGAGGTAGAGCGGGCGTCGGCATCGTTGTTTGCGGCCCGACAATCGTTTAGGGAT
GACTGGCAACAGCATCGCCGCAAGATCCTTAAGGCTATCCATGACTGA

Upstream 100 bases:

>100_bases
ACAACCACTCGCACAACCACCACGAAGAAGACGACCAAGGCCACCTCGAAGTCCGTCAAGGTGACCAAGGCGAACGCGAA
AACGTCGTCAGGAAGCTGAG

Downstream 100 bases:

>100_bases
TCAGACGGTGACTGGCCGCGATCTGGGCGGTGTATTCGTTGTCTTCGAGGGTGGGGACGGTGCCGGTAAGACGACCCAGG
CCCGACTACTTGACCAGTGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 495; Mature: 494

Protein sequence:

>495_residues
MTTGCRSGSTEPLYFELAWTAARPVPADLRTTVAAGGARRTIECKVTLLDSPDHRLLRSGIVVAHRVVDGLGEWYMDAPE
WSPWLPVARSVALDAAGELPQDFTCLVRPFLRGATLCPVAALSWERNETILEALDCTKLALIRDDRIAVVQSGVTTSRVR
ELTITPQRGLAEGQREWLTNRILALDGVPVSRHPSVLRRLGPGAGALTDYPRPHLHHGAGLQTWVSAQLAGQLRDVIEAD
LAVRCQGMDLGPTETTRTEPRVLPESPDRTDLVGMGYDPVTMSTPSIHDGNHGSIRPLQKAIRALSETLDAMSGLLDQAW
VERAQNLCLRVMGLDPGHISIHNLSREYYQLLEEITAAARSPRLTVDPDQPARPTMKRVLRKSVADAVAKCDDVEDVQGW
STAEVAVRHAAAVAGILDTGRAGKVAKRLRPVVKEIAQTKRSVTEAVDVSKMSPQEAFEAGREVERASASLFAARQSFRD
DWQQHRRKILKAIHD

Sequences:

>Translated_495_residues
MTTGCRSGSTEPLYFELAWTAARPVPADLRTTVAAGGARRTIECKVTLLDSPDHRLLRSGIVVAHRVVDGLGEWYMDAPE
WSPWLPVARSVALDAAGELPQDFTCLVRPFLRGATLCPVAALSWERNETILEALDCTKLALIRDDRIAVVQSGVTTSRVR
ELTITPQRGLAEGQREWLTNRILALDGVPVSRHPSVLRRLGPGAGALTDYPRPHLHHGAGLQTWVSAQLAGQLRDVIEAD
LAVRCQGMDLGPTETTRTEPRVLPESPDRTDLVGMGYDPVTMSTPSIHDGNHGSIRPLQKAIRALSETLDAMSGLLDQAW
VERAQNLCLRVMGLDPGHISIHNLSREYYQLLEEITAAARSPRLTVDPDQPARPTMKRVLRKSVADAVAKCDDVEDVQGW
STAEVAVRHAAAVAGILDTGRAGKVAKRLRPVVKEIAQTKRSVTEAVDVSKMSPQEAFEAGREVERASASLFAARQSFRD
DWQQHRRKILKAIHD
>Mature_494_residues
TTGCRSGSTEPLYFELAWTAARPVPADLRTTVAAGGARRTIECKVTLLDSPDHRLLRSGIVVAHRVVDGLGEWYMDAPEW
SPWLPVARSVALDAAGELPQDFTCLVRPFLRGATLCPVAALSWERNETILEALDCTKLALIRDDRIAVVQSGVTTSRVRE
LTITPQRGLAEGQREWLTNRILALDGVPVSRHPSVLRRLGPGAGALTDYPRPHLHHGAGLQTWVSAQLAGQLRDVIEADL
AVRCQGMDLGPTETTRTEPRVLPESPDRTDLVGMGYDPVTMSTPSIHDGNHGSIRPLQKAIRALSETLDAMSGLLDQAWV
ERAQNLCLRVMGLDPGHISIHNLSREYYQLLEEITAAARSPRLTVDPDQPARPTMKRVLRKSVADAVAKCDDVEDVQGWS
TAEVAVRHAAAVAGILDTGRAGKVAKRLRPVVKEIAQTKRSVTEAVDVSKMSPQEAFEAGREVERASASLFAARQSFRDD
WQQHRRKILKAIHD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54294; Mature: 54162

Theoretical pI: Translated: 7.59; Mature: 7.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTGCRSGSTEPLYFELAWTAARPVPADLRTTVAAGGARRTIECKVTLLDSPDHRLLRSG
CCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHCCCCCEEEEEEEEEECCCHHHHHHHH
IVVAHRVVDGLGEWYMDAPEWSPWLPVARSVALDAAGELPQDFTCLVRPFLRGATLCPVA
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHH
ALSWERNETILEALDCTKLALIRDDRIAVVQSGVTTSRVRELTITPQRGLAEGQREWLTN
HHCCCCCHHHHHHHHHHHEEEEECCCEEEEECCCCHHHHEEEEECCCCCHHHHHHHHHHH
RILALDGVPVSRHPSVLRRLGPGAGALTDYPRPHLHHGAGLQTWVSAQLAGQLRDVIEAD
HHHEECCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC
LAVRCQGMDLGPTETTRTEPRVLPESPDRTDLVGMGYDPVTMSTPSIHDGNHGSIRPLQK
HHEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCHHHHHH
AIRALSETLDAMSGLLDQAWVERAQNLCLRVMGLDPGHISIHNLSREYYQLLEEITAAAR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHCCCCCCCEEHHHHHHHHHHHHHHHHHHHC
SPRLTVDPDQPARPTMKRVLRKSVADAVAKCDDVEDVQGWSTAEVAVRHAAAVAGILDTG
CCCEEECCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHCCC
RAGKVAKRLRPVVKEIAQTKRSVTEAVDVSKMSPQEAFEAGREVERASASLFAARQSFRD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
DWQQHRRKILKAIHD
HHHHHHHHHHHHHCC
>Mature Secondary Structure 
TTGCRSGSTEPLYFELAWTAARPVPADLRTTVAAGGARRTIECKVTLLDSPDHRLLRSG
CCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHCCCCCEEEEEEEEEECCCHHHHHHHH
IVVAHRVVDGLGEWYMDAPEWSPWLPVARSVALDAAGELPQDFTCLVRPFLRGATLCPVA
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHH
ALSWERNETILEALDCTKLALIRDDRIAVVQSGVTTSRVRELTITPQRGLAEGQREWLTN
HHCCCCCHHHHHHHHHHHEEEEECCCEEEEECCCCHHHHEEEEECCCCCHHHHHHHHHHH
RILALDGVPVSRHPSVLRRLGPGAGALTDYPRPHLHHGAGLQTWVSAQLAGQLRDVIEAD
HHHEECCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC
LAVRCQGMDLGPTETTRTEPRVLPESPDRTDLVGMGYDPVTMSTPSIHDGNHGSIRPLQK
HHEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCHHHHHH
AIRALSETLDAMSGLLDQAWVERAQNLCLRVMGLDPGHISIHNLSREYYQLLEEITAAAR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHCCCCCCCEEHHHHHHHHHHHHHHHHHHHC
SPRLTVDPDQPARPTMKRVLRKSVADAVAKCDDVEDVQGWSTAEVAVRHAAAVAGILDTG
CCCEEECCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHCCC
RAGKVAKRLRPVVKEIAQTKRSVTEAVDVSKMSPQEAFEAGREVERASASLFAARQSFRD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
DWQQHRRKILKAIHD
HHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA