| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is 50841574
Identifier: 50841574
GI number: 50841574
Start: 91967
End: 94183
Strand: Reverse
Name: 50841574
Synonym: PPA0083
Alternate gene names: NA
Gene position: 94183-91967 (Counterclockwise)
Preceding gene: 50841575
Following gene: 50841573
Centisome position: 3.68
GC content: 63.28
Gene sequence:
>2217_bases ATGTCTAGCAGCACGTCTCAGACCACCAGCCGGGCCGGGCGGTTGACCCTGCCCGTGGAGAAGGGCATGGATGCGCAGGT CGCAGAGCTGCTCGAGCGACTCCAAGCCGATGCTGTGCGCAACAGCGACGGCACCGAACTACCGGAGATCGTTAATAAGC TCGCCACGAAGATCTACCAAACCTACTTCGTAGGGCGCGGAGACCAGGACTGGGCCCAAACCCACCCCCGGGAGCTGACC CGGATCTACCTGATGAGCGAACGGACCCCAGCGCTAGCAGACGGTGAGCTATCGATCGACCTGATGACGAATTGGTTCGT TGACCAGGTGTATCCCGACACCGACTGCGATGTCGAGCGGTGGTGGCAGGTGATCGATCGCACCACCGGGGATGTCATCG CCCCCGGCGCATGGCATGTTGACCCAGCCGACTTGAGCGTGACGATGGACCAGGCCCAGGCCGGACACGTCTACACCGTC GGTTTCCTGGCTGTGCAGCGCTGGGACCCCACCCAGATGTATAACTATCTCACCAACGGTTGGGCCGACGATCCACAACG GATCAAAGAATCGCCCTACGACATCCGCTATCCCCAGACCTGGCAGCACGTACGCCACGCCTTGGACCAGTGGCTGGCCG ATAACCCCCAGGTCGACGTAGTACGCTTCACGACCTTCTTCTACCACTTCACCCTCGTCTACGGCTCCGATGGAACCGAG CGCTTCGTCGACTGGTTCGGCTACTCCGCCTCCGTCTCGGTACCTGCAATGGAAGCTTTTGAGAAACGCTTCGGCTACCC ATTGCAGGCCGAGGACTTCATCGACGAGGGCTGGTACAACTCGCCTTTCCGGGTACCCCGCAAGTCCTTCCGGGACTGGG TCTCTTTCCAACACGAGTTCGTGACATCCCGCATGGCCGAGCTGGTGGAACAGGTCCATGCCGCCGGCCGCGAGGCCATG ATGTTCCTAGGCGACAACTGGATCGGCACTGAACCCTATGGGCCCCATTTCGCGCACACTGGAATAGACGCGGTAGTCGG ATCCGTGGGCAGTGGGGCTACCTGCCGAATGATCTCCGACATCCCCGGCGTCCGCTACACGGAGGGACGCCTACTGCCAT ACTTCTTCCCCGACGTCTTCTATCCAGGTGGAGATCCGGTGACCGAGGCCAATGCCTCGTGGCTAGCTGCACGTCGCGCC ATCGTGCGCTCTCCCCTGGACCGGATCGGCTACGGCGGATACCTGAGCCTGGCCGTCCAGCACCCCGAATTCGTAGACCG CATGGAAGAGATCGTCAACGAGTTCCGCGCTATCCATGCGGCTGCTGCCGGTCAGCGACCCATCGCTACCGGCCCCCGGG TTGCCATCGTGAACTGCTGGGGGGCGCTGCGCAGCTGGCAGACCCACATGGTCGCCCATGCCCTGCACTACCGACAGGCC TACTCGTACCTCGGCGTCCTTGAGTCGCTCAGTGGGCTGCCGCTACAGGTGGACTTTCTCAGCTTCGACGACATCCGCAA CGGCGTGCCCGAGGGAGTTGAGGTGCTGATCAACGTCGGTGCCGCCGGCACTGCGTTCAGTGGTGGATCCGAATGGGCCG ACGAGCGTGTCACCTCGGCAGTGCGCAGATTTGTCGCAGCCGGAGGCGGTCTGGTCGGCGTCGGTGACCCCACCGCCCAC CCCGCCCGCGGAGCGGTCTACCAGCTCAGCGATGTCCTTGGTGTCGACCGCGAACTCGGGTGGGGCCTGAGCACGCACCG CCCCATGCACACCAGCGATCATCACTTCGTCACCCTCGATTTGTCGAGCCGCTTGGACGTGGGAGAAGGCACTCCCGACG TGTTCTGCGCCAGCGCCACCACCACTGTCCTGGCAGCTCACCACGAGCAAGTAGACCTCGCAGTCAACCAGTTCGGCTGC GGCCGTGCCGTTTACCTGGCCGGACTCCCATACTCGTCGCAGAATGCCCGGTTGCTGCACCGAGCCCTCGCCTGGGCCGG ACACCGTGAGGACGCCTTCACCACGTGGACCAGCAGCGACGTGCGTGCAGAAGTCGCCGTCTATCCGCACAGTGACCGAC TGCTGGTGATCAACAACTCCTTGGACCAGGTGACCACCACCGTGTCGACCCCTACGACGGTCCGCGAAGTGCACATGGAA GCCGCAGGGCACCTGTGGTTCGACCTCGAACTTCACCCCCTGGACATCCCAGGCTGA
Upstream 100 bases:
>100_bases GGCACCCAATCCGGGACCGACGGCCCGGAGAGCATTGACAGTCGCGCGGCCGCATGTCATATTTTCGGCAGAACATGAAC ATTTAAGCTGAGGGAGCCCG
Downstream 100 bases:
>100_bases ACCCTCCAAGGCTCAATTTAGCCTTGGAATCCTCACGGTCGGACAACAACAGGGCAAGTCCGTTCGACAGCCACCACACG CTCGCCCCGAGGCAGCCACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 738; Mature: 737
Protein sequence:
>738_residues MSSSTSQTTSRAGRLTLPVEKGMDAQVAELLERLQADAVRNSDGTELPEIVNKLATKIYQTYFVGRGDQDWAQTHPRELT RIYLMSERTPALADGELSIDLMTNWFVDQVYPDTDCDVERWWQVIDRTTGDVIAPGAWHVDPADLSVTMDQAQAGHVYTV GFLAVQRWDPTQMYNYLTNGWADDPQRIKESPYDIRYPQTWQHVRHALDQWLADNPQVDVVRFTTFFYHFTLVYGSDGTE RFVDWFGYSASVSVPAMEAFEKRFGYPLQAEDFIDEGWYNSPFRVPRKSFRDWVSFQHEFVTSRMAELVEQVHAAGREAM MFLGDNWIGTEPYGPHFAHTGIDAVVGSVGSGATCRMISDIPGVRYTEGRLLPYFFPDVFYPGGDPVTEANASWLAARRA IVRSPLDRIGYGGYLSLAVQHPEFVDRMEEIVNEFRAIHAAAAGQRPIATGPRVAIVNCWGALRSWQTHMVAHALHYRQA YSYLGVLESLSGLPLQVDFLSFDDIRNGVPEGVEVLINVGAAGTAFSGGSEWADERVTSAVRRFVAAGGGLVGVGDPTAH PARGAVYQLSDVLGVDRELGWGLSTHRPMHTSDHHFVTLDLSSRLDVGEGTPDVFCASATTTVLAAHHEQVDLAVNQFGC GRAVYLAGLPYSSQNARLLHRALAWAGHREDAFTTWTSSDVRAEVAVYPHSDRLLVINNSLDQVTTTVSTPTTVREVHME AAGHLWFDLELHPLDIPG
Sequences:
>Translated_738_residues MSSSTSQTTSRAGRLTLPVEKGMDAQVAELLERLQADAVRNSDGTELPEIVNKLATKIYQTYFVGRGDQDWAQTHPRELT RIYLMSERTPALADGELSIDLMTNWFVDQVYPDTDCDVERWWQVIDRTTGDVIAPGAWHVDPADLSVTMDQAQAGHVYTV GFLAVQRWDPTQMYNYLTNGWADDPQRIKESPYDIRYPQTWQHVRHALDQWLADNPQVDVVRFTTFFYHFTLVYGSDGTE RFVDWFGYSASVSVPAMEAFEKRFGYPLQAEDFIDEGWYNSPFRVPRKSFRDWVSFQHEFVTSRMAELVEQVHAAGREAM MFLGDNWIGTEPYGPHFAHTGIDAVVGSVGSGATCRMISDIPGVRYTEGRLLPYFFPDVFYPGGDPVTEANASWLAARRA IVRSPLDRIGYGGYLSLAVQHPEFVDRMEEIVNEFRAIHAAAAGQRPIATGPRVAIVNCWGALRSWQTHMVAHALHYRQA YSYLGVLESLSGLPLQVDFLSFDDIRNGVPEGVEVLINVGAAGTAFSGGSEWADERVTSAVRRFVAAGGGLVGVGDPTAH PARGAVYQLSDVLGVDRELGWGLSTHRPMHTSDHHFVTLDLSSRLDVGEGTPDVFCASATTTVLAAHHEQVDLAVNQFGC GRAVYLAGLPYSSQNARLLHRALAWAGHREDAFTTWTSSDVRAEVAVYPHSDRLLVINNSLDQVTTTVSTPTTVREVHME AAGHLWFDLELHPLDIPG >Mature_737_residues SSSTSQTTSRAGRLTLPVEKGMDAQVAELLERLQADAVRNSDGTELPEIVNKLATKIYQTYFVGRGDQDWAQTHPRELTR IYLMSERTPALADGELSIDLMTNWFVDQVYPDTDCDVERWWQVIDRTTGDVIAPGAWHVDPADLSVTMDQAQAGHVYTVG FLAVQRWDPTQMYNYLTNGWADDPQRIKESPYDIRYPQTWQHVRHALDQWLADNPQVDVVRFTTFFYHFTLVYGSDGTER FVDWFGYSASVSVPAMEAFEKRFGYPLQAEDFIDEGWYNSPFRVPRKSFRDWVSFQHEFVTSRMAELVEQVHAAGREAMM FLGDNWIGTEPYGPHFAHTGIDAVVGSVGSGATCRMISDIPGVRYTEGRLLPYFFPDVFYPGGDPVTEANASWLAARRAI VRSPLDRIGYGGYLSLAVQHPEFVDRMEEIVNEFRAIHAAAAGQRPIATGPRVAIVNCWGALRSWQTHMVAHALHYRQAY SYLGVLESLSGLPLQVDFLSFDDIRNGVPEGVEVLINVGAAGTAFSGGSEWADERVTSAVRRFVAAGGGLVGVGDPTAHP ARGAVYQLSDVLGVDRELGWGLSTHRPMHTSDHHFVTLDLSSRLDVGEGTPDVFCASATTTVLAAHHEQVDLAVNQFGCG RAVYLAGLPYSSQNARLLHRALAWAGHREDAFTTWTSSDVRAEVAVYPHSDRLLVINNSLDQVTTTVSTPTTVREVHMEA AGHLWFDLELHPLDIPG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 82119; Mature: 81987
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSSTSQTTSRAGRLTLPVEKGMDAQVAELLERLQADAVRNSDGTELPEIVNKLATKIYQ CCCCCCCHHHCCCEEEEEHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH TYFVGRGDQDWAQTHPRELTRIYLMSERTPALADGELSIDLMTNWFVDQVYPDTDCDVER HHHCCCCCCHHHHCCHHHHEEEEEEECCCCCCCCCCEEEEEHHHHHHHHCCCCCCCCHHH WWQVIDRTTGDVIAPGAWHVDPADLSVTMDQAQAGHVYTVGFLAVQRWDPTQMYNYLTNG HHHHHHCCCCCEECCCCCCCCCCCCEEEECCCCCCCEEEEEEEEEECCCHHHHHHHHHCC WADDPQRIKESPYDIRYPQTWQHVRHALDQWLADNPQVDVVRFTTFFYHFTLVYGSDGTE CCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEHEEEEEEEEEEECCCCHH RFVDWFGYSASVSVPAMEAFEKRFGYPLQAEDFIDEGWYNSPFRVPRKSFRDWVSFQHEF HHHHHHCCCCCCCCHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH VTSRMAELVEQVHAAGREAMMFLGDNWIGTEPYGPHFAHTGIDAVVGSVGSGATCRMISD HHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHCCHHHHHHCCCCCCEEEEHHC IPGVRYTEGRLLPYFFPDVFYPGGDPVTEANASWLAARRAIVRSPLDRIGYGGYLSLAVQ CCCCEECCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHCCCCCEEEEEEC HPEFVDRMEEIVNEFRAIHAAAAGQRPIATGPRVAIVNCWGALRSWQTHMVAHALHYRQA CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHH YSYLGVLESLSGLPLQVDFLSFDDIRNGVPEGVEVLINVGAAGTAFSGGSEWADERVTSA HHHHHHHHHCCCCCEEEEEECHHHHHCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHH VRRFVAAGGGLVGVGDPTAHPARGAVYQLSDVLGVDRELGWGLSTHRPMHTSDHHFVTLD HHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCEEEEEE LSSRLDVGEGTPDVFCASATTTVLAAHHEQVDLAVNQFGCGRAVYLAGLPYSSQNARLLH CCCCCCCCCCCCCEEECCCHHHHHHHCCHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHH RALAWAGHREDAFTTWTSSDVRAEVAVYPHSDRLLVINNSLDQVTTTVSTPTTVREVHME HHHHHCCCCCCCEEEECCCCCEEEEEEECCCCCEEEEECCHHHHEEECCCCHHHHHHHHH AAGHLWFDLELHPLDIPG HCCCEEEEEEEECCCCCC >Mature Secondary Structure SSSTSQTTSRAGRLTLPVEKGMDAQVAELLERLQADAVRNSDGTELPEIVNKLATKIYQ CCCCCCHHHCCCEEEEEHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH TYFVGRGDQDWAQTHPRELTRIYLMSERTPALADGELSIDLMTNWFVDQVYPDTDCDVER HHHCCCCCCHHHHCCHHHHEEEEEEECCCCCCCCCCEEEEEHHHHHHHHCCCCCCCCHHH WWQVIDRTTGDVIAPGAWHVDPADLSVTMDQAQAGHVYTVGFLAVQRWDPTQMYNYLTNG HHHHHHCCCCCEECCCCCCCCCCCCEEEECCCCCCCEEEEEEEEEECCCHHHHHHHHHCC WADDPQRIKESPYDIRYPQTWQHVRHALDQWLADNPQVDVVRFTTFFYHFTLVYGSDGTE CCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEHEEEEEEEEEEECCCCHH RFVDWFGYSASVSVPAMEAFEKRFGYPLQAEDFIDEGWYNSPFRVPRKSFRDWVSFQHEF HHHHHHCCCCCCCCHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH VTSRMAELVEQVHAAGREAMMFLGDNWIGTEPYGPHFAHTGIDAVVGSVGSGATCRMISD HHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHCCHHHHHHCCCCCCEEEEHHC IPGVRYTEGRLLPYFFPDVFYPGGDPVTEANASWLAARRAIVRSPLDRIGYGGYLSLAVQ CCCCEECCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHCCCCCEEEEEEC HPEFVDRMEEIVNEFRAIHAAAAGQRPIATGPRVAIVNCWGALRSWQTHMVAHALHYRQA CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHH YSYLGVLESLSGLPLQVDFLSFDDIRNGVPEGVEVLINVGAAGTAFSGGSEWADERVTSA HHHHHHHHHCCCCCEEEEEECHHHHHCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHH VRRFVAAGGGLVGVGDPTAHPARGAVYQLSDVLGVDRELGWGLSTHRPMHTSDHHFVTLD HHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCEEEEEE LSSRLDVGEGTPDVFCASATTTVLAAHHEQVDLAVNQFGCGRAVYLAGLPYSSQNARLLH CCCCCCCCCCCCCEEECCCHHHHHHHCCHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHH RALAWAGHREDAFTTWTSSDVRAEVAVYPHSDRLLVINNSLDQVTTTVSTPTTVREVHME HHHHHCCCCCCCEEEECCCCCEEEEEEECCCCCEEEEECCHHHHEEECCCCHHHHHHHHH AAGHLWFDLELHPLDIPG HCCCEEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA