| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is yhgE [H]
Identifier: 50841563
GI number: 50841563
Start: 76411
End: 78780
Strand: Direct
Name: yhgE [H]
Synonym: PPA0072
Alternate gene names: 50841563
Gene position: 76411-78780 (Clockwise)
Preceding gene: 50841562
Following gene: 50841566
Centisome position: 2.98
GC content: 64.77
Gene sequence:
>2370_bases ATGATGACTGAACGTTCCCATTCCACGATCAGGTTAAGGTGGCCGGCGGTGGTGGTTCTCGTCCTCGTTCCGCTGCTGGT GGTCGCCGGATTGGTCGGGACGACCTGGCATACCACCGACCGGTTGGGCCGGGTGAAAGCGGCCGTCGTCAACGAGGACA AGGCCGTCAAGGTGCGTGGACAACTGGTTCCGATGGGCCGCCAACTCACCGCCGCCTTGATGGACTCTGGCTCGCACACC ACTGATGGCCACACCGTCGACTGGACTCTCACCGACGCCCAGGGGGCTGCCGAGGGGCTGCGGGACGGCACTTACTCGGT GGTGGTGACGATTCCGGAGTCCTTCTCGGCTGATGCCACCTCCTTCTCCGCCAACGACGTCAACAAGGCCAAACAGGCCC TCATCGACGTGACGGCCTCCCAGAACTCCCCGGTCACCGACACCACGATCGCTGAGCTCACCGCCCAGGTGGCGCGCCGG TCCCTCAACACCACCCTGACTTCGAAATATCTGGAGAATGTCTACGTTGGTTTCAATCGGTTTGCCGAACAGATGGCCAG GATGGCCGGCGCTGCGGCGAAACTGGACGACGGGGCCACGAAACTCGCTGACGGCACTAAACGTTCTTCCGCCGGCGCAG CCACCCTTGCCTCCGGCATGACGAAGCTCAGCGGGGGAGCTCAGCGGTTGTCAGCTAACGGCGGCAAGCTCACCGACGGT GTCTCCCAGCTCTCCGGAGGGCTCACAACCTTGTCTCACAAGGGCCAGCAGCTCAGCCAAGGGGCCGATGGGCTGGCCAG CGGGGTGGCGACCTACACCGATGGCACGGGGAAGGTCGTCGACGGCATCGGGCAGCTGTCGGCTGGTTTGACGACGATGG ATGAGAAGATCGCTGCGGCTACCGGGAAAATCGATCCCTCCCAGCTCGACAAACTCGCCGGTGGGGCCGGACAGCTTGCT GATGGCATCGACCAGTTCACCGGCAATCTGGTGGGTTACCGCACTGAGATCCGCCAGTACGCGTCGGGAAAGAAAACCGC GGAACTTAGTAAGGAAGCCCTGTCCCGGGGCGAGGCTGACTTCCTGCGTCGATGCATGCGAAGCCACACCGCGCAGGAAT GCCACGACCTGGTACCCATCGTCCGCGACGCGATGACCGATGGGTACGCCCTGGGCGTGCGGGCTGGGTCGGGGGTGGCC GTCAAGGCGATGGCGATCAAGGATCCGAACTCTGGCAAGAGCATCGACGACGGCATCGACGAACTTGCTGACGGTTCCTC ACGACTGTCTCGAGGGGTCAATGAGTTCACCACACAACTGCGCACTGGTTTGCCGAAGATGGTCAGGCAGGTCACCCGGC TACATGAGGGTATCCACCAGGCCGCTACCGGTGCCCAGGCCTTAGCCAGCCGGTCCCAACAGCTCAAGGCCGGCGGGGTG AAGTTATCGTCAGGGGCCGCGACTCTTGCCCACGGGGTCGACGCCTACACCGCTGGGGTGAGTAAGGCTGCTGGCTCGAC GCCGAAACTTCAAAACGGCGTTAACCAGTACGTCGATGGGGTAGATCGTCTCTCCGACGGCCTGGCGAAAGCCGCCACGG GGGCTGGAACCTTCGCGTCGGGGATGACCAAGCTCGACTCAGGAGCCCGGAAACTCACCAAGGGCACCGGCGTGTTCTCC AGCCAGCTGGCAGCCGGAGCCAAGAAGGTGCCGACATACTCCCAGAACGACCGCACCAAGCTTGCCGACGTCGTCTCTGC ACCTGTCAACGGGGACGGACCAGCTATCGCGACCTCGGTGGCTGTCGTCGCTGTGCTGCTCGTCCTGGGCGCCTGGATCG CTGCTCTGGCGACCTGGTTGGTGGCCCGGACGGTGCCCTCGGGGGCACTCACCTCCTCACGCTCAACCCTGGGGTTATTG GCCCGGACAATGTCGGTTGGGGCAGTGGTAAGCGTTGCGGTGAGCGGTGGCCTGGCCGTCATTGGTGGTACGGCTCTGGG GCTTTCGGTGCCGAGGTCAATCGGTTTGGGTAGCTTGTTGCTGCTTGTCGGGGTGATGTTCGGGCTGGTCAACCACTCCC TGGCGGCATGGCTGCACGGGCTGGGGCGTCTTATCAGTGTCGTGCTGGTCACCGCCACAGTGGCTGCTGGATTAGCCAGC ACAGTTCCCGCTCCGGTGCGCTGGGCCGACGCCGTCTCCCCCCTCAACCCGGCCCTGCGGGCGGTGCAGGCCGTGGTGGC CGGCCAGAATCCCGCGTTTGGGTCCTTAGTGGCCGTCGTGGCTTGGGCCGTGGTGGCTCTGGTGGCCAGCATGGGGGCGG TGGGGCGGCGTCGCCAGACCAGCGCGAAGGCGCTGCTGGGCTCGGGGTAG
Upstream 100 bases:
>100_bases TCTTGGGTGCCCAGCGTCGCGGTCGCATCGATTGGCTCTCCCCACAGATCATCCACAACCTGGCCGAACACCATTTTGAG TCGTCCTCTGGAGGTACTCG
Downstream 100 bases:
>100_bases CCGTCGACCTACAGTGGTGCCGTGAACAAACCTTTCCTTGTGGGCCTTGCCGTCGTGGCCAGTACCATTGCAGTGGTCAG CCGGATCAGCTCAGTGAGGA
Product: membrane associated protein
Products: NA
Alternate protein names: ORFB [H]
Number of amino acids: Translated: 789; Mature: 789
Protein sequence:
>789_residues MMTERSHSTIRLRWPAVVVLVLVPLLVVAGLVGTTWHTTDRLGRVKAAVVNEDKAVKVRGQLVPMGRQLTAALMDSGSHT TDGHTVDWTLTDAQGAAEGLRDGTYSVVVTIPESFSADATSFSANDVNKAKQALIDVTASQNSPVTDTTIAELTAQVARR SLNTTLTSKYLENVYVGFNRFAEQMARMAGAAAKLDDGATKLADGTKRSSAGAATLASGMTKLSGGAQRLSANGGKLTDG VSQLSGGLTTLSHKGQQLSQGADGLASGVATYTDGTGKVVDGIGQLSAGLTTMDEKIAAATGKIDPSQLDKLAGGAGQLA DGIDQFTGNLVGYRTEIRQYASGKKTAELSKEALSRGEADFLRRCMRSHTAQECHDLVPIVRDAMTDGYALGVRAGSGVA VKAMAIKDPNSGKSIDDGIDELADGSSRLSRGVNEFTTQLRTGLPKMVRQVTRLHEGIHQAATGAQALASRSQQLKAGGV KLSSGAATLAHGVDAYTAGVSKAAGSTPKLQNGVNQYVDGVDRLSDGLAKAATGAGTFASGMTKLDSGARKLTKGTGVFS SQLAAGAKKVPTYSQNDRTKLADVVSAPVNGDGPAIATSVAVVAVLLVLGAWIAALATWLVARTVPSGALTSSRSTLGLL ARTMSVGAVVSVAVSGGLAVIGGTALGLSVPRSIGLGSLLLLVGVMFGLVNHSLAAWLHGLGRLISVVLVTATVAAGLAS TVPAPVRWADAVSPLNPALRAVQAVVAGQNPAFGSLVAVVAWAVVALVASMGAVGRRRQTSAKALLGSG
Sequences:
>Translated_789_residues MMTERSHSTIRLRWPAVVVLVLVPLLVVAGLVGTTWHTTDRLGRVKAAVVNEDKAVKVRGQLVPMGRQLTAALMDSGSHT TDGHTVDWTLTDAQGAAEGLRDGTYSVVVTIPESFSADATSFSANDVNKAKQALIDVTASQNSPVTDTTIAELTAQVARR SLNTTLTSKYLENVYVGFNRFAEQMARMAGAAAKLDDGATKLADGTKRSSAGAATLASGMTKLSGGAQRLSANGGKLTDG VSQLSGGLTTLSHKGQQLSQGADGLASGVATYTDGTGKVVDGIGQLSAGLTTMDEKIAAATGKIDPSQLDKLAGGAGQLA DGIDQFTGNLVGYRTEIRQYASGKKTAELSKEALSRGEADFLRRCMRSHTAQECHDLVPIVRDAMTDGYALGVRAGSGVA VKAMAIKDPNSGKSIDDGIDELADGSSRLSRGVNEFTTQLRTGLPKMVRQVTRLHEGIHQAATGAQALASRSQQLKAGGV KLSSGAATLAHGVDAYTAGVSKAAGSTPKLQNGVNQYVDGVDRLSDGLAKAATGAGTFASGMTKLDSGARKLTKGTGVFS SQLAAGAKKVPTYSQNDRTKLADVVSAPVNGDGPAIATSVAVVAVLLVLGAWIAALATWLVARTVPSGALTSSRSTLGLL ARTMSVGAVVSVAVSGGLAVIGGTALGLSVPRSIGLGSLLLLVGVMFGLVNHSLAAWLHGLGRLISVVLVTATVAAGLAS TVPAPVRWADAVSPLNPALRAVQAVVAGQNPAFGSLVAVVAWAVVALVASMGAVGRRRQTSAKALLGSG >Mature_789_residues MMTERSHSTIRLRWPAVVVLVLVPLLVVAGLVGTTWHTTDRLGRVKAAVVNEDKAVKVRGQLVPMGRQLTAALMDSGSHT TDGHTVDWTLTDAQGAAEGLRDGTYSVVVTIPESFSADATSFSANDVNKAKQALIDVTASQNSPVTDTTIAELTAQVARR SLNTTLTSKYLENVYVGFNRFAEQMARMAGAAAKLDDGATKLADGTKRSSAGAATLASGMTKLSGGAQRLSANGGKLTDG VSQLSGGLTTLSHKGQQLSQGADGLASGVATYTDGTGKVVDGIGQLSAGLTTMDEKIAAATGKIDPSQLDKLAGGAGQLA DGIDQFTGNLVGYRTEIRQYASGKKTAELSKEALSRGEADFLRRCMRSHTAQECHDLVPIVRDAMTDGYALGVRAGSGVA VKAMAIKDPNSGKSIDDGIDELADGSSRLSRGVNEFTTQLRTGLPKMVRQVTRLHEGIHQAATGAQALASRSQQLKAGGV KLSSGAATLAHGVDAYTAGVSKAAGSTPKLQNGVNQYVDGVDRLSDGLAKAATGAGTFASGMTKLDSGARKLTKGTGVFS SQLAAGAKKVPTYSQNDRTKLADVVSAPVNGDGPAIATSVAVVAVLLVLGAWIAALATWLVARTVPSGALTSSRSTLGLL ARTMSVGAVVSVAVSGGLAVIGGTALGLSVPRSIGLGSLLLLVGVMFGLVNHSLAAWLHGLGRLISVVLVTATVAAGLAS TVPAPVRWADAVSPLNPALRAVQAVVAGQNPAFGSLVAVVAWAVVALVASMGAVGRRRQTSAKALLGSG
Specific function: Unknown
COG id: COG1511
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To L.lactis phage infection protein (PIP) [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013525 - InterPro: IPR022703 - InterPro: IPR017501 - InterPro: IPR017500 [H]
Pfam domain/function: PF01061 ABC2_membrane; PF12051 DUF3533 [H]
EC number: NA
Molecular weight: Translated: 80352; Mature: 80352
Theoretical pI: Translated: 10.36; Mature: 10.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMTERSHSTIRLRWPAVVVLVLVPLLVVAGLVGTTWHTTDRLGRVKAAVVNEDKAVKVRG CCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCEEEEEC QLVPMGRQLTAALMDSGSHTTDGHTVDWTLTDAQGAAEGLRDGTYSVVVTIPESFSADAT EEECCCHHHHHHHHCCCCCCCCCCEEEEEEECCHHHHHHCCCCCEEEEEECCCCCCCCCC SFSANDVNKAKQALIDVTASQNSPVTDTTIAELTAQVARRSLNTTLTSKYLENVYVGFNR CCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FAEQMARMAGAAAKLDDGATKLADGTKRSSAGAATLASGMTKLSGGAQRLSANGGKLTDG HHHHHHHHHCCHHHCCCCHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHCCCCCCCHHH VSQLSGGLTTLSHKGQQLSQGADGLASGVATYTDGTGKVVDGIGQLSAGLTTMDEKIAAA HHHHCCCHHHHHHCCHHHHHCCHHHHHCCHHEECCCCHHHHHHHHHHHCHHHHHHHHHHH TGKIDPSQLDKLAGGAGQLADGIDQFTGNLVGYRTEIRQYASGKKTAELSKEALSRGEAD CCCCCHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHH FLRRCMRSHTAQECHDLVPIVRDAMTDGYALGVRAGSGVAVKAMAIKDPNSGKSIDDGID HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEEEEEEECCCCCCCHHHHHH ELADGSSRLSRGVNEFTTQLRTGLPKMVRQVTRLHEGIHQAATGAQALASRSQQLKAGGV HHHCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCE KLSSGAATLAHGVDAYTAGVSKAAGSTPKLQNGVNQYVDGVDRLSDGLAKAATGAGTFAS EECCCCHHHHHCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH GMTKLDSGARKLTKGTGVFSSQLAAGAKKVPTYSQNDRTKLADVVSAPVNGDGPAIATSV HHHHHHHHHHHHHHCCCHHHHHHHCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHH AVVAVLLVLGAWIAALATWLVARTVPSGALTSSRSTLGLLARTMSVGAVVSVAVSGGLAV HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEE IGGTALGLSVPRSIGLGSLLLLVGVMFGLVNHSLAAWLHGLGRLISVVLVTATVAAGLAS ECCHHHHCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TVPAPVRWADAVSPLNPALRAVQAVVAGQNPAFGSLVAVVAWAVVALVASMGAVGRRRQT CCCCCCHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHH SAKALLGSG HHHHHCCCC >Mature Secondary Structure MMTERSHSTIRLRWPAVVVLVLVPLLVVAGLVGTTWHTTDRLGRVKAAVVNEDKAVKVRG CCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCEEEEEC QLVPMGRQLTAALMDSGSHTTDGHTVDWTLTDAQGAAEGLRDGTYSVVVTIPESFSADAT EEECCCHHHHHHHHCCCCCCCCCCEEEEEEECCHHHHHHCCCCCEEEEEECCCCCCCCCC SFSANDVNKAKQALIDVTASQNSPVTDTTIAELTAQVARRSLNTTLTSKYLENVYVGFNR CCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FAEQMARMAGAAAKLDDGATKLADGTKRSSAGAATLASGMTKLSGGAQRLSANGGKLTDG HHHHHHHHHCCHHHCCCCHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHCCCCCCCHHH VSQLSGGLTTLSHKGQQLSQGADGLASGVATYTDGTGKVVDGIGQLSAGLTTMDEKIAAA HHHHCCCHHHHHHCCHHHHHCCHHHHHCCHHEECCCCHHHHHHHHHHHCHHHHHHHHHHH TGKIDPSQLDKLAGGAGQLADGIDQFTGNLVGYRTEIRQYASGKKTAELSKEALSRGEAD CCCCCHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHH FLRRCMRSHTAQECHDLVPIVRDAMTDGYALGVRAGSGVAVKAMAIKDPNSGKSIDDGID HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEEEEEEECCCCCCCHHHHHH ELADGSSRLSRGVNEFTTQLRTGLPKMVRQVTRLHEGIHQAATGAQALASRSQQLKAGGV HHHCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCE KLSSGAATLAHGVDAYTAGVSKAAGSTPKLQNGVNQYVDGVDRLSDGLAKAATGAGTFAS EECCCCHHHHHCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH GMTKLDSGARKLTKGTGVFSSQLAAGAKKVPTYSQNDRTKLADVVSAPVNGDGPAIATSV HHHHHHHHHHHHHHCCCHHHHHHHCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHH AVVAVLLVLGAWIAALATWLVARTVPSGALTSSRSTLGLLARTMSVGAVVSVAVSGGLAV HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEE IGGTALGLSVPRSIGLGSLLLLVGVMFGLVNHSLAAWLHGLGRLISVVLVTATVAAGLAS ECCHHHHCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TVPAPVRWADAVSPLNPALRAVQAVVAGQNPAFGSLVAVVAWAVVALVASMGAVGRRRQT CCCCCCHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHH SAKALLGSG HHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9579061; 9384377; 1459957 [H]