| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is ydfJ [H]
Identifier: 50841562
GI number: 50841562
Start: 73685
End: 76414
Strand: Direct
Name: ydfJ [H]
Synonym: PPA0071
Alternate gene names: 50841562
Gene position: 73685-76414 (Clockwise)
Preceding gene: 50841560
Following gene: 50841563
Centisome position: 2.88
GC content: 62.82
Gene sequence:
>2730_bases ATGTCCTCCTTGCTCCACGATCTCGGGGTGTGGTGTTTCCGGCGGGCCAAGACCGTTGTAGCACTGTGGCTGGTCCTGCT GGCTCTGCTTGGTGTGGGAGTTGCCGCTCTGCACGGTGACTACGACGATTTCTTCACCATCCCCGGGGCGCCTTCCCAGG TGGCCTACGACAAACTCCAGGTGGCCTTCCCGCAGGCCTCTGCGCTCAGCGCCAACGTCGTCGTCACCGTCCCTGACGGC ACCAACATCTCGTCGAAGCTCATCCGCTCCCGGATCGAAAAGGGGGTGGACGAGCTCAAAGACCTCCCCCTCGTCACCGG GGCGACATCACCGTGGAACAAGTACGTTACCGGGATGGTCAACAAGGACCACACCGCGGCCGTCATCCAGGTAGAGCTGG GGCAGAACAACGCGGTGACCTTTCCTGATTCCGGACGTCACGACCTGATCAGGGTTGGCAACGAGATTCAATCGGACCTG CCATCAGGGTCCCATGTGTACGTAGGGGGACAAGCCTTCGAGGCGACGCTACCCTCCCTGTCGATCACCGAGGTCATCGG AGTCGGGGTGGCCCTCGTTGTCCTCTCCGTCACCCTGGGATCCCTGGTAGCAGCTGGAATGCCCATCGTTACAGCCGTGC TCGGGGTCGGGGTCACCTATTCAGGCATGGCGATTCTCACCAGATTCACCACGGTCAACTCCGTCACACCGATGCTGGCG GTCATGCTTGGGCTGGCCGTCGGGATCGACTACGCCCTGTTCATCCTGTCGCGCCACCGTGACCAGCTGCGTGACGGTGC CGAGGTGCAGGAATCGGCTGCCCGAGCCGTCGCGACCTCGGGTTCGGCGGTGGTCTTTGCCGGGGCGACGGTCGTCATCG CCCTCATCGGCCTGTCCATTGCCAGGATCCCCTTCCTCACCGTCATGGGTATCTTCGCAGCCATTGGTGTGGCCCTGGCC GTCGTCATCGCCCTGACGATGCTCCCTGCCTTCATGGGGCTCATGGGGGAGAGGTTGCGTCCGAGGAGATCCCGCGCGGA CACGAAGGCCAGGACTGCCGGGGAAAAGGAACGTTCCGGGGGCATCTTCGGATGGTGGGTGCGCACTGTCACGCGGGTGC CGCTGGTAACCATTCTTGTCGTCGTAGTGGGGCTGGGGGCCTTGGCTGTCCCCATGAAGGACCTGCACCTTTCCCTGCCC ACCGCTGCAGAACTGCCGGCCAGCAACACCGCTCGGCAGACCTATGACGTCCTGGAGCAGAAATTCGGGCCGGGGTTCAA CGGGCCGGTCATCGTCACCGCCGACGTCGTCTCCTCGCACGACCCGATGAGAATAGTCAACGGGCTGAAGGCCGACATCG AGAAGATTCCGGGGGTTGACACCGTTGCCCTGGCGGTGCCGAACCGAAATGCCGACTCCGCGATGATCCAGGTGCTGCCG ACCACCGGCCCGGCCGACGAGGCCACTAATAACCTGGTGCGTACCCTGCGTGACCACGAGACTCAGTGGCGCGATACGTA CGGTGTCGACACCGCCGTCACCGGCTTGACAGCCATCAAGCTCGATGTCTCGCAACGTCTAGGTGCCGCCCTGTTACCCT TCGGGATCTTCGTCGTCGGGCTGTGCCTAGTGCTGCTGACCTTGGTGTTTCGCTCCATCGCAGTGCCCATCAAAGCCACC GTCGGGTACTTGTTATCGGTGTTGGCCGCTTTCGGGGTCTCCCAACTCGTCTTCAACCGGGGTATCGGGTTGCAGGTGGT GAACCTGGATCGTCTGGTGCCCATCATCTCCTTCATGCCTATCGTCGTCATGGGCATACTGTTCGGATTGGCGATGGACT ACGAGGTGTTCCTGGTCTCGCGGATGCGTGAGGAATATGTACACACCGGTGATGCCAAAGGTGCTGTGACAAGGGGATTC ATCGGTTCGGGCAAGGTCGTGACGGCAGCTGCCGTCATCATGATTTCGGTGTTCGTCTTCTTCATCCCCGAGGGCATGAA CGCCATCAAGGAAATCGCCCTGGCCCTGGCCGTCGGGATCCTCACGGATGCCTTCTTGGTGCGGATGACCCTCGTTCCGG CCGTGATGGCTCTGCTAGGTGACAAGGCCTGGTGGCTGCCCGGGTGGCTGGATCGACGCCTACCCCGCCTCGACATCGAG GGAGAAGGGATCGCCCACGAGGAAAAGCTGGCCGCCTGGCCCACAGCGGATCACACCGAGGCCCTGCACGCCGAGGGGAT CGGGGTGGAGGGGCTCTTCGAAGGCCTCGACCTGCACGTCGAACCGCGTCAGGTGCAAGCCGTCGTCGGATCGCAGAACA GTGTCTCGGCCGTCCTGCTGGCGATCGGGGGACGGCTGCCCTTGGATCACGGCCGGATGAGGTCGGGAGGATTGCTGCTA CCCGAGCGGGCTTCCAGAGTGCGTCGGGTGACGTGGTTCCTCGACGCGTCCGCTCCGGATTTCGTTGACGAGCTGCGCTC AGCGATGACGGTACTCACCCATCTGCCCCGACGACCCAGTAAACGTCCCCGGCTGTTCCTCATTGACCACGCCGACCGGA TCGTCGATCCCATTACTCGGGATCTGCTGGAATCCCTGGTTCGCGAAGCCGGCGAGGCTGCGGTGATCTTGGGTGCCCAG CGTCGCGGTCGCATCGATTGGCTCTCCCCACAGATCATCCACAACCTGGCCGAACACCATTTTGAGTCGTCCTCTGGAGG TACTCGATGA
Upstream 100 bases:
>100_bases ACGTGCAACCACTCATGGGGTGGATGTATCGGATACGATGCTACCTCGGATACATAAGTGTATCGAGTGGTGTTCGTGTG ATTCCAACCGAGGGGTGATG
Downstream 100 bases:
>100_bases TGACTGAACGTTCCCATTCCACGATCAGGTTAAGGTGGCCGGCGGTGGTGGTTCTCGTCCTCGTTCCGCTGCTGGTGGTC GCCGGATTGGTCGGGACGAC
Product: putative membrane transport protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 909; Mature: 908
Protein sequence:
>909_residues MSSLLHDLGVWCFRRAKTVVALWLVLLALLGVGVAALHGDYDDFFTIPGAPSQVAYDKLQVAFPQASALSANVVVTVPDG TNISSKLIRSRIEKGVDELKDLPLVTGATSPWNKYVTGMVNKDHTAAVIQVELGQNNAVTFPDSGRHDLIRVGNEIQSDL PSGSHVYVGGQAFEATLPSLSITEVIGVGVALVVLSVTLGSLVAAGMPIVTAVLGVGVTYSGMAILTRFTTVNSVTPMLA VMLGLAVGIDYALFILSRHRDQLRDGAEVQESAARAVATSGSAVVFAGATVVIALIGLSIARIPFLTVMGIFAAIGVALA VVIALTMLPAFMGLMGERLRPRRSRADTKARTAGEKERSGGIFGWWVRTVTRVPLVTILVVVVGLGALAVPMKDLHLSLP TAAELPASNTARQTYDVLEQKFGPGFNGPVIVTADVVSSHDPMRIVNGLKADIEKIPGVDTVALAVPNRNADSAMIQVLP TTGPADEATNNLVRTLRDHETQWRDTYGVDTAVTGLTAIKLDVSQRLGAALLPFGIFVVGLCLVLLTLVFRSIAVPIKAT VGYLLSVLAAFGVSQLVFNRGIGLQVVNLDRLVPIISFMPIVVMGILFGLAMDYEVFLVSRMREEYVHTGDAKGAVTRGF IGSGKVVTAAAVIMISVFVFFIPEGMNAIKEIALALAVGILTDAFLVRMTLVPAVMALLGDKAWWLPGWLDRRLPRLDIE GEGIAHEEKLAAWPTADHTEALHAEGIGVEGLFEGLDLHVEPRQVQAVVGSQNSVSAVLLAIGGRLPLDHGRMRSGGLLL PERASRVRRVTWFLDASAPDFVDELRSAMTVLTHLPRRPSKRPRLFLIDHADRIVDPITRDLLESLVREAGEAAVILGAQ RRGRIDWLSPQIIHNLAEHHFESSSGGTR
Sequences:
>Translated_909_residues MSSLLHDLGVWCFRRAKTVVALWLVLLALLGVGVAALHGDYDDFFTIPGAPSQVAYDKLQVAFPQASALSANVVVTVPDG TNISSKLIRSRIEKGVDELKDLPLVTGATSPWNKYVTGMVNKDHTAAVIQVELGQNNAVTFPDSGRHDLIRVGNEIQSDL PSGSHVYVGGQAFEATLPSLSITEVIGVGVALVVLSVTLGSLVAAGMPIVTAVLGVGVTYSGMAILTRFTTVNSVTPMLA VMLGLAVGIDYALFILSRHRDQLRDGAEVQESAARAVATSGSAVVFAGATVVIALIGLSIARIPFLTVMGIFAAIGVALA VVIALTMLPAFMGLMGERLRPRRSRADTKARTAGEKERSGGIFGWWVRTVTRVPLVTILVVVVGLGALAVPMKDLHLSLP TAAELPASNTARQTYDVLEQKFGPGFNGPVIVTADVVSSHDPMRIVNGLKADIEKIPGVDTVALAVPNRNADSAMIQVLP TTGPADEATNNLVRTLRDHETQWRDTYGVDTAVTGLTAIKLDVSQRLGAALLPFGIFVVGLCLVLLTLVFRSIAVPIKAT VGYLLSVLAAFGVSQLVFNRGIGLQVVNLDRLVPIISFMPIVVMGILFGLAMDYEVFLVSRMREEYVHTGDAKGAVTRGF IGSGKVVTAAAVIMISVFVFFIPEGMNAIKEIALALAVGILTDAFLVRMTLVPAVMALLGDKAWWLPGWLDRRLPRLDIE GEGIAHEEKLAAWPTADHTEALHAEGIGVEGLFEGLDLHVEPRQVQAVVGSQNSVSAVLLAIGGRLPLDHGRMRSGGLLL PERASRVRRVTWFLDASAPDFVDELRSAMTVLTHLPRRPSKRPRLFLIDHADRIVDPITRDLLESLVREAGEAAVILGAQ RRGRIDWLSPQIIHNLAEHHFESSSGGTR >Mature_908_residues SSLLHDLGVWCFRRAKTVVALWLVLLALLGVGVAALHGDYDDFFTIPGAPSQVAYDKLQVAFPQASALSANVVVTVPDGT NISSKLIRSRIEKGVDELKDLPLVTGATSPWNKYVTGMVNKDHTAAVIQVELGQNNAVTFPDSGRHDLIRVGNEIQSDLP SGSHVYVGGQAFEATLPSLSITEVIGVGVALVVLSVTLGSLVAAGMPIVTAVLGVGVTYSGMAILTRFTTVNSVTPMLAV MLGLAVGIDYALFILSRHRDQLRDGAEVQESAARAVATSGSAVVFAGATVVIALIGLSIARIPFLTVMGIFAAIGVALAV VIALTMLPAFMGLMGERLRPRRSRADTKARTAGEKERSGGIFGWWVRTVTRVPLVTILVVVVGLGALAVPMKDLHLSLPT AAELPASNTARQTYDVLEQKFGPGFNGPVIVTADVVSSHDPMRIVNGLKADIEKIPGVDTVALAVPNRNADSAMIQVLPT TGPADEATNNLVRTLRDHETQWRDTYGVDTAVTGLTAIKLDVSQRLGAALLPFGIFVVGLCLVLLTLVFRSIAVPIKATV GYLLSVLAAFGVSQLVFNRGIGLQVVNLDRLVPIISFMPIVVMGILFGLAMDYEVFLVSRMREEYVHTGDAKGAVTRGFI GSGKVVTAAAVIMISVFVFFIPEGMNAIKEIALALAVGILTDAFLVRMTLVPAVMALLGDKAWWLPGWLDRRLPRLDIEG EGIAHEEKLAAWPTADHTEALHAEGIGVEGLFEGLDLHVEPRQVQAVVGSQNSVSAVLLAIGGRLPLDHGRMRSGGLLLP ERASRVRRVTWFLDASAPDFVDELRSAMTVLTHLPRRPSKRPRLFLIDHADRIVDPITRDLLESLVREAGEAAVILGAQR RGRIDWLSPQIIHNLAEHHFESSSGGTR
Specific function: Unknown
COG id: COG2409
COG function: function code R; Predicted drug exporters of the RND superfamily
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mmpL family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004869 - InterPro: IPR000731 [H]
Pfam domain/function: PF03176 MMPL [H]
EC number: NA
Molecular weight: Translated: 97152; Mature: 97020
Theoretical pI: Translated: 7.09; Mature: 7.09
Prosite motif: PS50156 SSD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSLLHDLGVWCFRRAKTVVALWLVLLALLGVGVAALHGDYDDFFTIPGAPSQVAYDKLQ CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCHHHHHHHH VAFPQASALSANVVVTVPDGTNISSKLIRSRIEKGVDELKDLPLVTGATSPWNKYVTGMV EECCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHCCC NKDHTAAVIQVELGQNNAVTFPDSGRHDLIRVGNEIQSDLPSGSHVYVGGQAFEATLPSL CCCCCEEEEEEEECCCCEEECCCCCCHHHHHHCCHHHHHCCCCCEEEECCCCHHHHCCCC SITEVIGVGVALVVLSVTLGSLVAAGMPIVTAVLGVGVTYSGMAILTRFTTVNSVTPMLA HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH VMLGLAVGIDYALFILSRHRDQLRDGAEVQESAARAVATSGSAVVFAGATVVIALIGLSI HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHH ARIPFLTVMGIFAAIGVALAVVIALTMLPAFMGLMGERLRPRRSRADTKARTAGEKERSG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHCCCHHHCC GIFGWWVRTVTRVPLVTILVVVVGLGALAVPMKDLHLSLPTAAELPASNTARQTYDVLEQ CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCHHCCCCCCHHHHHHHHHHH KFGPGFNGPVIVTADVVSSHDPMRIVNGLKADIEKIPGVDTVALAVPNRNADSAMIQVLP HCCCCCCCCEEEEEHHHCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEEEEEC TTGPADEATNNLVRTLRDHETQWRDTYGVDTAVTGLTAIKLDVSQRLGAALLPFGIFVVG CCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHEEEEEHHHHHCHHHHHHHHHHHH LCLVLLTLVFRSIAVPIKATVGYLLSVLAAFGVSQLVFNRGIGLQVVNLDRLVPIISFMP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHH IVVMGILFGLAMDYEVFLVSRMREEYVHTGDAKGAVTRGFIGSGKVVTAAAVIMISVFVF HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH FIPEGMNAIKEIALALAVGILTDAFLVRMTLVPAVMALLGDKAWWLPGWLDRRLPRLDIE HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCC GEGIAHEEKLAAWPTADHTEALHAEGIGVEGLFEGLDLHVEPRQVQAVVGSQNSVSAVLL CCCCCCHHHHCCCCCCCCCHHHHHCCCCHHHHHCCCCCEECHHHHHHHHCCCCCHHHHHH AIGGRLPLDHGRMRSGGLLLPERASRVRRVTWFLDASAPDFVDELRSAMTVLTHLPRRPS HHCCCCCCCCCCCCCCCEECCHHHHHHEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCC KRPRLFLIDHADRIVDPITRDLLESLVREAGEAAVILGAQRRGRIDWLSPQIIHNLAEHH CCCCEEEEECHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHHH FESSSGGTR CCCCCCCCC >Mature Secondary Structure SSLLHDLGVWCFRRAKTVVALWLVLLALLGVGVAALHGDYDDFFTIPGAPSQVAYDKLQ CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCHHHHHHHH VAFPQASALSANVVVTVPDGTNISSKLIRSRIEKGVDELKDLPLVTGATSPWNKYVTGMV EECCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHCCC NKDHTAAVIQVELGQNNAVTFPDSGRHDLIRVGNEIQSDLPSGSHVYVGGQAFEATLPSL CCCCCEEEEEEEECCCCEEECCCCCCHHHHHHCCHHHHHCCCCCEEEECCCCHHHHCCCC SITEVIGVGVALVVLSVTLGSLVAAGMPIVTAVLGVGVTYSGMAILTRFTTVNSVTPMLA HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH VMLGLAVGIDYALFILSRHRDQLRDGAEVQESAARAVATSGSAVVFAGATVVIALIGLSI HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHH ARIPFLTVMGIFAAIGVALAVVIALTMLPAFMGLMGERLRPRRSRADTKARTAGEKERSG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHCCCHHHCC GIFGWWVRTVTRVPLVTILVVVVGLGALAVPMKDLHLSLPTAAELPASNTARQTYDVLEQ CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCHHCCCCCCHHHHHHHHHHH KFGPGFNGPVIVTADVVSSHDPMRIVNGLKADIEKIPGVDTVALAVPNRNADSAMIQVLP HCCCCCCCCEEEEEHHHCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEEEEEC TTGPADEATNNLVRTLRDHETQWRDTYGVDTAVTGLTAIKLDVSQRLGAALLPFGIFVVG CCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHEEEEEHHHHHCHHHHHHHHHHHH LCLVLLTLVFRSIAVPIKATVGYLLSVLAAFGVSQLVFNRGIGLQVVNLDRLVPIISFMP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHH IVVMGILFGLAMDYEVFLVSRMREEYVHTGDAKGAVTRGFIGSGKVVTAAAVIMISVFVF HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH FIPEGMNAIKEIALALAVGILTDAFLVRMTLVPAVMALLGDKAWWLPGWLDRRLPRLDIE HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCC GEGIAHEEKLAAWPTADHTEALHAEGIGVEGLFEGLDLHVEPRQVQAVVGSQNSVSAVLL CCCCCCHHHHCCCCCCCCCHHHHHCCCCHHHHHCCCCCEECHHHHHHHHCCCCCHHHHHH AIGGRLPLDHGRMRSGGLLLPERASRVRRVTWFLDASAPDFVDELRSAMTVLTHLPRRPS HHCCCCCCCCCCCCCCCEECCHHHHHHEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCC KRPRLFLIDHADRIVDPITRDLLESLVREAGEAAVILGAQRRGRIDWLSPQIIHNLAEHH CCCCEEEEECHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHHH FESSSGGTR CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]