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The map label for this gene is ihfA [C]

Identifier: 50365485

GI number: 50365485

Start: 778357

End: 779682

Strand: Reverse

Name: ihfA [C]

Synonym: Mfl670

Alternate gene names: 50365485

Gene position: 779682-778357 (Counterclockwise)

Preceding gene: 50365486

Following gene: 50365484

Centisome position: 98.29

GC content: 28.58

Gene sequence:

>1326_bases
ATGTCAATCGAAATGAAAAATAAAAAGCACACAAGAACCATTGCTTTAATATTTCTTTTAGTTTTATTTATAGCTTTAAT
ATTTGCATTTAAACTTATAAACCAAGCTACAAATGGAACATCACAATGAGCACAAACAATTGCAGGCTCTGGATTAATAG
AAAGTAAACACATAAATGCAGTGTGATTTACAGATAAAGGTCTAAGTCATTTTTTAGCAGGTCCAATGGGATTCAAATCA
TTTGCTCAATTCAAATTAGTTGCAACTGTTGGAACAACAGAAACATATAGTACATTCTTGTTGCCAATTTTTTGAGATTT
ATTAATTAACTGAATAGCTCTTGTTGGAATCATCTTTTTAGTAGTTTCAATAGTATTGAGTTTTGTAAAAGAAAATAAAA
TTAACAAGATTCTTTCAGAAAAAGGAACAACAACTGCTATTGAAGAAACTAAAGAAATTACTAAAGAAGAAATTAAACAA
GAAGCAATTGAATTAGAAGAAAAATTAGAAGAAGAAATTGTAGCAAAACAACCAGTTAAGAAAAAAGTAAAAAAACCAGT
AGCTAAAAAAGTTGAAGAAGTTAAAGTTGAAGAAGTTAAAGTTGAAGAAGCTAAAGTAGTTGCTAAAAAACCAGTAGCTA
AAAAACCGGCAGCTAAAAAAGTTGAAGAAGCTAAAGTAGTTGCTAAAAAACCAGTAGCTAAAAAACCGGCAGCTAAAAAA
GTTGAAGAAGCTAAAGTAGTTGCTAAAAAACCAGTAGCTAAAAAACCAGCGGCTAAAAAAGTTGAAGAAGCTAAAGTTGA
AGAAGCTAAAGTAGTTGCTAAAAAACCAGCGGCTAAAAAACCAGCGGCTAAAAAAGTTGAAGAAGCTAAAGTAGTTGCTA
AAAAACCAGTAGCTAAAAAACCAGTAGCTAAAAAAGTTGAAGAAGTTAAAGTTGAAGAAACTAAAGTAGCAGCAACAGCT
AAAACTGAATCAAAATATGTTATTAAAAAACACTACAATCAAGTTTCTAAAAAAGATCTTTTAATTAAGTTAGAAGAAAC
TCATTCAGAATTTAGCAAAAAATCTGTTAAAGAAGTAGTTGATAGTGCTTTTGAAATCATGAGCAATGCAATTATAAATA
ATGAAGAAGTTTTAATTTCAAATTTTGGAAAACTAACAAAAATACACAAGGAAGCTAAAAAAGGTATTAACCCATCAACA
GGTGAAACAATTGATATTCCTGCGTCAAATACAGTTAAATTCAAAGCCAATAAACATTTAAAAGAAAATATGTCAAAAGG
TAAATGAACAGGTTTAACAAAAGTCAAAAAAGAAATTAAAAAATAA

Upstream 100 bases:

>100_bases
TATCTTAAAAATAACTATGCAACGGAGCAAAAGTAACACTAAAAGTTCACTCAGCAAAATAATTTGTTTATAATTATATA
AAAAAGAAGGAGGCATAATC

Downstream 100 bases:

>100_bases
TTAATAAAAACGCCGACAGGTGTTTTTTTATTTGTGCTTTTATTTATAAATAAAAAAAGATATAATATTTCAAACAATTG
AATAAAAAAAACTTATACAT

Product: histone-like DNA-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 441; Mature: 440

Protein sequence:

>441_residues
MSIEMKNKKHTRTIALIFLLVLFIALIFAFKLINQATNGTSQWAQTIAGSGLIESKHINAVWFTDKGLSHFLAGPMGFKS
FAQFKLVATVGTTETYSTFLLPIFWDLLINWIALVGIIFLVVSIVLSFVKENKINKILSEKGTTTAIEETKEITKEEIKQ
EAIELEEKLEEEIVAKQPVKKKVKKPVAKKVEEVKVEEVKVEEAKVVAKKPVAKKPAAKKVEEAKVVAKKPVAKKPAAKK
VEEAKVVAKKPVAKKPAAKKVEEAKVEEAKVVAKKPAAKKPAAKKVEEAKVVAKKPVAKKPVAKKVEEVKVEETKVAATA
KTESKYVIKKHYNQVSKKDLLIKLEETHSEFSKKSVKEVVDSAFEIMSNAIINNEEVLISNFGKLTKIHKEAKKGINPST
GETIDIPASNTVKFKANKHLKENMSKGKWTGLTKVKKEIKK

Sequences:

>Translated_441_residues
MSIEMKNKKHTRTIALIFLLVLFIALIFAFKLINQATNGTSQ*AQTIAGSGLIESKHINAV*FTDKGLSHFLAGPMGFKS
FAQFKLVATVGTTETYSTFLLPIF*DLLIN*IALVGIIFLVVSIVLSFVKENKINKILSEKGTTTAIEETKEITKEEIKQ
EAIELEEKLEEEIVAKQPVKKKVKKPVAKKVEEVKVEEVKVEEAKVVAKKPVAKKPAAKKVEEAKVVAKKPVAKKPAAKK
VEEAKVVAKKPVAKKPAAKKVEEAKVEEAKVVAKKPAAKKPAAKKVEEAKVVAKKPVAKKPVAKKVEEVKVEETKVAATA
KTESKYVIKKHYNQVSKKDLLIKLEETHSEFSKKSVKEVVDSAFEIMSNAIINNEEVLISNFGKLTKIHKEAKKGINPST
GETIDIPASNTVKFKANKHLKENMSKGK*TGLTKVKKEIKK
>Mature_440_residues
SIEMKNKKHTRTIALIFLLVLFIALIFAFKLINQATNGTSQ*AQTIAGSGLIESKHINAV*FTDKGLSHFLAGPMGFKSF
AQFKLVATVGTTETYSTFLLPIF*DLLIN*IALVGIIFLVVSIVLSFVKENKINKILSEKGTTTAIEETKEITKEEIKQE
AIELEEKLEEEIVAKQPVKKKVKKPVAKKVEEVKVEEVKVEEAKVVAKKPVAKKPAAKKVEEAKVVAKKPVAKKPAAKKV
EEAKVVAKKPVAKKPAAKKVEEAKVEEAKVVAKKPAAKKPAAKKVEEAKVVAKKPVAKKPVAKKVEEVKVEETKVAATAK
TESKYVIKKHYNQVSKKDLLIKLEETHSEFSKKSVKEVVDSAFEIMSNAIINNEEVLISNFGKLTKIHKEAKKGINPSTG
ETIDIPASNTVKFKANKHLKENMSKGK*TGLTKVKKEIKK

Specific function: This Protein Is One Of The Two Subunits Of Integration Host Factor, A Specific DNA-Binding Protein That Functions In Genetic Recombination As Well As In Transcriptional And Translational Control. Ihf Also Plays A Crucial Role In The Lysogenic Life Cycle O

COG id: COG0776

COG function: function code L; Bacterial nucleoid DNA-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47891; Mature: 47760

Theoretical pI: Translated: 10.58; Mature: 10.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIEMKNKKHTRTIALIFLLVLFIALIFAFKLINQATNGTSQAQTIAGSGLIESKHINAV
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCEECCCCCEE
FTDKGLSHFLAGPMGFKSFAQFKLVATVGTTETYSTFLLPIFDLLINIALVGIIFLVVSI
ECCCCHHHHHCCCCCHHHHHHEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLSFVKENKINKILSEKGTTTAIEETKEITKEEIKQEAIELEEKLEEEIVAKQPVKKKVK
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
KPVAKKVEEVKVEEVKVEEAKVVAKKPVAKKPAAKKVEEAKVVAKKPVAKKPAAKKVEEA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHH
KVVAKKPVAKKPAAKKVEEAKVEEAKVVAKKPAAKKPAAKKVEEAKVVAKKPVAKKPVAK
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHH
KVEEVKVEETKVAATAKTESKYVIKKHYNQVSKKDLLIKLEETHSEFSKKSVKEVVDSAF
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHH
EIMSNAIINNEEVLISNFGKLTKIHKEAKKGINPSTGETIDIPASNTVKFKANKHLKENM
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCEEEECCCHHHHHHH
SKGKTGLTKVKKEIKK
HCCCHHHHHHHHHHCC
>Mature Secondary Structure 
SIEMKNKKHTRTIALIFLLVLFIALIFAFKLINQATNGTSQAQTIAGSGLIESKHINAV
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCEECCCCCEE
FTDKGLSHFLAGPMGFKSFAQFKLVATVGTTETYSTFLLPIFDLLINIALVGIIFLVVSI
ECCCCHHHHHCCCCCHHHHHHEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLSFVKENKINKILSEKGTTTAIEETKEITKEEIKQEAIELEEKLEEEIVAKQPVKKKVK
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
KPVAKKVEEVKVEEVKVEEAKVVAKKPVAKKPAAKKVEEAKVVAKKPVAKKPAAKKVEEA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHH
KVVAKKPVAKKPAAKKVEEAKVEEAKVVAKKPAAKKPAAKKVEEAKVVAKKPVAKKPVAK
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHH
KVEEVKVEETKVAATAKTESKYVIKKHYNQVSKKDLLIKLEETHSEFSKKSVKEVVDSAF
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHH
EIMSNAIINNEEVLISNFGKLTKIHKEAKKGINPSTGETIDIPASNTVKFKANKHLKENM
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCEEEECCCHHHHHHH
SKGKTGLTKVKKEIKK
HCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA