| Definition | Mesoplasma florum L1, complete genome. |
|---|---|
| Accession | NC_006055 |
| Length | 793,224 |
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The map label for this gene is 50365481
Identifier: 50365481
GI number: 50365481
Start: 772503
End: 773402
Strand: Reverse
Name: 50365481
Synonym: Mfl666
Alternate gene names: NA
Gene position: 773402-772503 (Counterclockwise)
Preceding gene: 50365482
Following gene: 50365480
Centisome position: 97.5
GC content: 32.11
Gene sequence:
>900_bases ATGGAAGCAATATTTAGTTTAGCGTTAGGATTTTTTGTTGTTTTCACATTAGCCGCTATATCAGGAATGTTTTCTGAAAG ATCAGGGGTTGTAAACCTTGGGATTGAAGGTTTTATGACAATCGGGGCTTTGGCATACGTGTCATTTTGCTTTATGGTTA AAAAAACATCAAATAACGTTGAAGACTTACATGTCTTATACTTATTAATTGGTGCGCTATTCTCAATGGTTGTTGCAGGT TTATTTTCATTGTTACAAACATTAATGGTTTTAAAATTAAAAACAGATCAAATTATTTCTGGTACAGTAATTAATTTATT AGCTCAAGGTATTGCATTATTTATTGTTCATATTCAAGGATTCGGAACTGGTGGAACTATTTTAGGTTCGCTAAGCCCTA AGCTAATATCATTAAATTACTTTATTGCTTATGCCATATTTACAATGCTAGTAACTGTTACAATAGGTTTATATTTTACT TTTACAAAAGTAGGTACAAGGCATATAGCTGCTGGGGAAAACCCACAAGCTTTAGATGCAGCAGGTGTTAAAGTTAATAG ATATAGATTTGTTTGTATAATTATTTCAGGTGCTATAGCTGGTTTAGCAGGAACAATGTTTGTTGTTACCCAATCACTTC AAAATTTTAATGGAAGTGTTCAAGGATTAGGGTTTATTGCATTAGCTATTATGATAATTGGTCAATGAAGAGTGAGCCTA ATTGTTATGTTCTGTATAATATTTTCAATAATGTTTAGTATAGGTCAAAGAATTACGGGATGAAACTCATTGCCAAGAGC ACTTCCATTCATCATGTCAATTGTTGTAATGGTTATTGCATCAAAATGATCATCACCGCCACAAGCAAGTGGTGTACCAT TTGATAAAACTTTAAGATAA
Upstream 100 bases:
>100_bases GAGTTAGAAGCAAAAAAAGGTTCTAGAACATTTAAAAAATTAAAAATTAGAAAATTAAAAATCGATCTACTAGAAAAACA AATGGAGGTTGTAAAAATTT
Downstream 100 bases:
>100_bases AATAATATTAGAAAAAAGAGGAATTATTATGACACCACACATTAGTGCAAAAAAAGAAGATATTGCAAAAACTGTTTTAA TGCCAGGAGACCCATTAAGA
Product: ribose ABC transporter permease component
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 299; Mature: 299
Protein sequence:
>299_residues MEAIFSLALGFFVVFTLAAISGMFSERSGVVNLGIEGFMTIGALAYVSFCFMVKKTSNNVEDLHVLYLLIGALFSMVVAG LFSLLQTLMVLKLKTDQIISGTVINLLAQGIALFIVHIQGFGTGGTILGSLSPKLISLNYFIAYAIFTMLVTVTIGLYFT FTKVGTRHIAAGENPQALDAAGVKVNRYRFVCIIISGAIAGLAGTMFVVTQSLQNFNGSVQGLGFIALAIMIIGQWRVSL IVMFCIIFSIMFSIGQRITGWNSLPRALPFIMSIVVMVIASKWSSPPQASGVPFDKTLR
Sequences:
>Translated_299_residues MEAIFSLALGFFVVFTLAAISGMFSERSGVVNLGIEGFMTIGALAYVSFCFMVKKTSNNVEDLHVLYLLIGALFSMVVAG LFSLLQTLMVLKLKTDQIISGTVINLLAQGIALFIVHIQGFGTGGTILGSLSPKLISLNYFIAYAIFTMLVTVTIGLYFT FTKVGTRHIAAGENPQALDAAGVKVNRYRFVCIIISGAIAGLAGTMFVVTQSLQNFNGSVQGLGFIALAIMIIGQ*RVSL IVMFCIIFSIMFSIGQRITG*NSLPRALPFIMSIVVMVIASK*SSPPQASGVPFDKTLR >Mature_299_residues MEAIFSLALGFFVVFTLAAISGMFSERSGVVNLGIEGFMTIGALAYVSFCFMVKKTSNNVEDLHVLYLLIGALFSMVVAG LFSLLQTLMVLKLKTDQIISGTVINLLAQGIALFIVHIQGFGTGGTILGSLSPKLISLNYFIAYAIFTMLVTVTIGLYFT FTKVGTRHIAAGENPQALDAAGVKVNRYRFVCIIISGAIAGLAGTMFVVTQSLQNFNGSVQGLGFIALAIMIIGQ*RVSL IVMFCIIFSIMFSIGQRITG*NSLPRALPFIMSIVVMVIASK*SSPPQASGVPFDKTLR
Specific function: Unknown
COG id: COG1079
COG function: function code R; Uncharacterized ABC-type transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001851 [H]
Pfam domain/function: PF02653 BPD_transp_2 [H]
EC number: NA
Molecular weight: Translated: 31600; Mature: 31600
Theoretical pI: Translated: 10.03; Mature: 10.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEAIFSLALGFFVVFTLAAISGMFSERSGVVNLGIEGFMTIGALAYVSFCFMVKKTSNNV CHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHHHCCCCH EDLHVLYLLIGALFSMVVAGLFSLLQTLMVLKLKTDQIISGTVINLLAQGIALFIVHIQG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHEEC FGTGGTILGSLSPKLISLNYFIAYAIFTMLVTVTIGLYFTFTKVGTRHIAAGENPQALDA CCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCHHH AGVKVNRYRFVCIIISGAIAGLAGTMFVVTQSLQNFNGSVQGLGFIALAIMIIGQRVSLI CCCEEECEEEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH VMFCIIFSIMFSIGQRITGNSLPRALPFIMSIVVMVIASKSSPPQASGVPFDKTLR HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCC >Mature Secondary Structure MEAIFSLALGFFVVFTLAAISGMFSERSGVVNLGIEGFMTIGALAYVSFCFMVKKTSNNV CHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHHHCCCCH EDLHVLYLLIGALFSMVVAGLFSLLQTLMVLKLKTDQIISGTVINLLAQGIALFIVHIQG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHEEC FGTGGTILGSLSPKLISLNYFIAYAIFTMLVTVTIGLYFTFTKVGTRHIAAGENPQALDA CCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCHHH AGVKVNRYRFVCIIISGAIAGLAGTMFVVTQSLQNFNGSVQGLGFIALAIMIIGQRVSLI CCCEEECEEEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH VMFCIIFSIMFSIGQRITGNSLPRALPFIMSIVVMVIASKSSPPQASGVPFDKTLR HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7569993 [H]