Click here to switch to the map view.

The map label for this gene is 50365474

Identifier: 50365474

GI number: 50365474

Start: 766637

End: 767353

Strand: Reverse

Name: 50365474

Synonym: Mfl659

Alternate gene names: NA

Gene position: 767353-766637 (Counterclockwise)

Preceding gene: 50365475

Following gene: 50365473

Centisome position: 96.74

GC content: 23.85

Gene sequence:

>717_bases
GTGATGTTTGTTTCTTTAAATTTAATGTCTAGTTTAAAAATTAAAAAAACGTTGTCTTATCAAGGCAATAATTTAAGCTA
TACAATTACATATAAAGAACAGAAACACATCATTTTAAGAGTTATACAAGGCGAAGTTAGAATTAGTGCACCTTTTAATA
CACCTGATTGAGAAATTGAAAAAATTATTTATAAAAATATTTCAAAAATAGTTTCAGTTCAAAATAAGCATATAATTGCA
TCAGTATATGATTTCAATACTTTAAAACCTTGAGTTAAAGTTTTTGACCAAGAGATGGAAATAATAATAGATGAAAATTT
AACAAGATCTAAAATTGAAAACAATAAGATTTATATGAAAAATTATTTTAACCAAGAAGAACAAGTTAAAAAGCTTTATA
GTATTTTAGCTAAACATTATAAAAATTGATTCATTTCAAGAACAATTGATTGAAGCTTGAAAATGAATGTTCAATTTAGA
AATGTCAATGTTAAACTTATGAAGGCTAAATGAGGATATTGTTTGCCTAAAGATTCTAAAATAGCGTACAACACAAAATT
ATTGCATTTTAATGATGAAATCATTAGTTATGTTATCATTCATGAGTTAACACATATTTTACACCCAAATCATTCAAAAG
AATTTTGACATTTTGTTGAAAGGTATTGCCCAAATTATAAAGAATTGCAAACTCAATTAAATTCAACAGGAATATAG

Upstream 100 bases:

>100_bases
ATTTATAATGTTCAAGACCTTATTGAATTAGGGGATGAAAAGAAAGTTAAAGAATCTGGAAAAATGCGTCTTGAAGGTAA
AGGTTACATAATGCAAGACG

Downstream 100 bases:

>100_bases
ATTTTTTATTTTAAATAAACTATAATAAATTTTAAGATTTGTTGGAGGTGTTTTTTATGAAAAAATTAATTAAACATTTT
TTAAAAAATCCACCAATAAT

Product: zinc metalloprotease

Products: NA

Alternate protein names: Zinc Metallopeptidase

Number of amino acids: Translated: 238; Mature: 238

Protein sequence:

>238_residues
MMFVSLNLMSSLKIKKTLSYQGNNLSYTITYKEQKHIILRVIQGEVRISAPFNTPDWEIEKIIYKNISKIVSVQNKHIIA
SVYDFNTLKPWVKVFDQEMEIIIDENLTRSKIENNKIYMKNYFNQEEQVKKLYSILAKHYKNWFISRTIDWSLKMNVQFR
NVNVKLMKAKWGYCLPKDSKIAYNTKLLHFNDEIISYVIIHELTHILHPNHSKEFWHFVERYCPNYKELQTQLNSTGI

Sequences:

>Translated_238_residues
MMFVSLNLMSSLKIKKTLSYQGNNLSYTITYKEQKHIILRVIQGEVRISAPFNTPD*EIEKIIYKNISKIVSVQNKHIIA
SVYDFNTLKP*VKVFDQEMEIIIDENLTRSKIENNKIYMKNYFNQEEQVKKLYSILAKHYKN*FISRTID*SLKMNVQFR
NVNVKLMKAK*GYCLPKDSKIAYNTKLLHFNDEIISYVIIHELTHILHPNHSKEF*HFVERYCPNYKELQTQLNSTGI
>Mature_238_residues
MMFVSLNLMSSLKIKKTLSYQGNNLSYTITYKEQKHIILRVIQGEVRISAPFNTPD*EIEKIIYKNISKIVSVQNKHIIA
SVYDFNTLKP*VKVFDQEMEIIIDENLTRSKIENNKIYMKNYFNQEEQVKKLYSILAKHYKN*FISRTID*SLKMNVQFR
NVNVKLMKAK*GYCLPKDSKIAYNTKLLHFNDEIISYVIIHELTHILHPNHSKEF*HFVERYCPNYKELQTQLNSTGI

Specific function: Unknown

COG id: COG1451

COG function: function code R; Predicted metal-dependent hydrolase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27308; Mature: 27308

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMFVSLNLMSSLKIKKTLSYQGNNLSYTITYKEQKHIILRVIQGEVRISAPFNTPDEIEK
CEEEEEEHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEEEEEECCEEEECCCCCHHHHHH
IIYKNISKIVSVQNKHIIASVYDFNTLKPVKVFDQEMEIIIDENLTRSKIENNKIYMKNY
HHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHCCCEEEEECCCCCHHHHCCCEEEEEHH
FNQEEQVKKLYSILAKHYKNFISRTIDSLKMNVQFRNVNVKLMKAKGYCLPKDSKIAYNT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECEEEEEEECCCCCCCCCCEEEEE
KLLHFNDEIISYVIIHELTHILHPNHSKEFHFVERYCPNYKELQTQLNSTGI
EEEEECHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCHHHHHHHHHCCCC
>Mature Secondary Structure
MMFVSLNLMSSLKIKKTLSYQGNNLSYTITYKEQKHIILRVIQGEVRISAPFNTPDEIEK
CEEEEEEHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEEEEEECCEEEECCCCCHHHHHH
IIYKNISKIVSVQNKHIIASVYDFNTLKPVKVFDQEMEIIIDENLTRSKIENNKIYMKNY
HHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHCCCEEEEECCCCCHHHHCCCEEEEEHH
FNQEEQVKKLYSILAKHYKNFISRTIDSLKMNVQFRNVNVKLMKAKGYCLPKDSKIAYNT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECEEEEEEECCCCCCCCCCEEEEE
KLLHFNDEIISYVIIHELTHILHPNHSKEFHFVERYCPNYKELQTQLNSTGI
EEEEECHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA