| Definition | Mesoplasma florum L1, complete genome. |
|---|---|
| Accession | NC_006055 |
| Length | 793,224 |
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The map label for this gene is yvfR [H]
Identifier: 50365461
GI number: 50365461
Start: 751528
End: 752232
Strand: Reverse
Name: yvfR [H]
Synonym: Mfl646
Alternate gene names: 50365461
Gene position: 752232-751528 (Counterclockwise)
Preceding gene: 50365463
Following gene: 50365460
Centisome position: 94.83
GC content: 25.96
Gene sequence:
>705_bases ATGAAAAATATAATTGAAATAAGTAATTTAAAAAAAGCATTTAAAAATAAAGTTGTATTAAATAATTTAAACCTTGATAT TAAAGAAGGCGAAAGAGTTGCGATCATGGGTGCAAATGGTTGTGGGAAAACAACTTTAGTTGAAATGATAGCTCAATTTA ACAATCCGGATAAAGGAACAATAAAAATTAACTTGGAAGGCAACATTAAAAATGAAATTGGAATTCAATTACAAACAGGA GATTGACCTGCTGGAATTACACCATTAGATATGTTAGCTTTTTATAGAAGTATATATCCTAAATTTACAAAAGAATGAGA AAATACAATTGCTGATGTTTTTGATATTAAAGAATTTATTAAAACACCATTAAAAAAACTTTCAGGTGGTCAAAAACAAA GATTCAATGCTATGATTTCTGTTATGAATAATCCAAAGATTGTTATATTAGATGAGTTAACAACAGGATTGGACATGGAA CTTCAATATAAAATTACAGACTTTTTTAGAGAAAACGTTAAAAAATCAAAACAAACATTATTGCTTGTTTCGCATCATCC TGAAGAAGTTGAAATATTATGTGATCGAATAATAATAATTAAAGATGGTGGGATATTTTTTGACAAAAAAATATCTGCTG TAATAAAAAAATATGGTTCTGTTAGAGACTTAATGAATTTATTCTTTAAAGGAGAGTTGAAATAA
Upstream 100 bases:
>100_bases GCTCCTTTTATTTATATTGATTCTATACTAATATTTTATTTTGTGTATTCCTATTTATCTTAATAGTGCTAATATTATAT TTATATGAAAAGGAGACATT
Downstream 100 bases:
>100_bases TGTTTAAGAAAATTGACACATTTAATTTTAAAAAGCAATCAAGCATATTTAAAAATTTAACTTTATTAGTTTATAAATCA TTTATTAAAGAACCGAGAAG
Product: putative multidrug ABC transporter ATP-binding component
Products: ADP; phosphate; putrescine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 234; Mature: 234
Protein sequence:
>234_residues MKNIIEISNLKKAFKNKVVLNNLNLDIKEGERVAIMGANGCGKTTLVEMIAQFNNPDKGTIKINLEGNIKNEIGIQLQTG DWPAGITPLDMLAFYRSIYPKFTKEWENTIADVFDIKEFIKTPLKKLSGGQKQRFNAMISVMNNPKIVILDELTTGLDME LQYKITDFFRENVKKSKQTLLLVSHHPEEVEILCDRIIIIKDGGIFFDKKISAVIKKYGSVRDLMNLFFKGELK
Sequences:
>Translated_234_residues MKNIIEISNLKKAFKNKVVLNNLNLDIKEGERVAIMGANGCGKTTLVEMIAQFNNPDKGTIKINLEGNIKNEIGIQLQTG D*PAGITPLDMLAFYRSIYPKFTKE*ENTIADVFDIKEFIKTPLKKLSGGQKQRFNAMISVMNNPKIVILDELTTGLDME LQYKITDFFRENVKKSKQTLLLVSHHPEEVEILCDRIIIIKDGGIFFDKKISAVIKKYGSVRDLMNLFFKGELK >Mature_234_residues MKNIIEISNLKKAFKNKVVLNNLNLDIKEGERVAIMGANGCGKTTLVEMIAQFNNPDKGTIKINLEGNIKNEIGIQLQTG D*PAGITPLDMLAFYRSIYPKFTKE*ENTIADVFDIKEFIKTPLKKLSGGQKQRFNAMISVMNNPKIVILDELTTGLDME LQYKITDFFRENVKKSKQTLLLVSHHPEEVEILCDRIIIIKDGGIFFDKKISAVIKKYGSVRDLMNLFFKGELK
Specific function: Part Of The Binding-Protein-Dependent Transport System For Putrescine. Probably Responsible For Energy Coupling To The Transport System. [C]
COG id: COG1131
COG function: function code V; ABC-type multidrug transport system, ATPase component
Gene ontology:
Cell location: Inner Membrane-Associated [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Homo sapiens, GI153792144, Length=233, Percent_Identity=25.7510729613734, Blast_Score=95, Evalue=6e-20, Organism=Homo sapiens, GI27477115, Length=223, Percent_Identity=25.5605381165919, Blast_Score=93, Evalue=2e-19, Organism=Homo sapiens, GI27881501, Length=221, Percent_Identity=29.8642533936652, Blast_Score=91, Evalue=6e-19, Organism=Homo sapiens, GI30795238, Length=221, Percent_Identity=29.8642533936652, Blast_Score=91, Evalue=6e-19, Organism=Homo sapiens, GI6005701, Length=226, Percent_Identity=24.3362831858407, Blast_Score=89, Evalue=4e-18, Organism=Homo sapiens, GI27262624, Length=258, Percent_Identity=29.4573643410853, Blast_Score=87, Evalue=1e-17, Organism=Homo sapiens, GI27262626, Length=258, Percent_Identity=29.4573643410853, Blast_Score=87, Evalue=1e-17, Organism=Homo sapiens, GI27436953, Length=218, Percent_Identity=24.7706422018349, Blast_Score=87, Evalue=2e-17, Organism=Homo sapiens, GI9961250, Length=230, Percent_Identity=30, Blast_Score=84, Evalue=1e-16, Organism=Homo sapiens, GI4505771, Length=230, Percent_Identity=30, Blast_Score=84, Evalue=1e-16, Organism=Homo sapiens, GI9961252, Length=226, Percent_Identity=30.0884955752212, Blast_Score=83, Evalue=2e-16, Organism=Homo sapiens, GI31657092, Length=209, Percent_Identity=28.7081339712919, Blast_Score=82, Evalue=3e-16, Organism=Homo sapiens, GI21536376, Length=215, Percent_Identity=29.7674418604651, Blast_Score=80, Evalue=1e-15, Organism=Homo sapiens, GI255708477, Length=203, Percent_Identity=32.0197044334975, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI116734710, Length=212, Percent_Identity=27.3584905660377, Blast_Score=78, Evalue=5e-15, Organism=Homo sapiens, GI45446740, Length=243, Percent_Identity=23.8683127572016, Blast_Score=78, Evalue=7e-15, Organism=Homo sapiens, GI47078218, Length=243, Percent_Identity=23.8683127572016, Blast_Score=78, Evalue=7e-15, Organism=Homo sapiens, GI148612844, Length=219, Percent_Identity=26.9406392694064, Blast_Score=74, Evalue=8e-14, Organism=Homo sapiens, GI42741659, Length=206, Percent_Identity=27.6699029126214, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI42490749, Length=205, Percent_Identity=26.8292682926829, Blast_Score=73, Evalue=2e-13, Organism=Homo sapiens, GI105990541, Length=212, Percent_Identity=26.4150943396226, Blast_Score=72, Evalue=4e-13, Organism=Homo sapiens, GI21536378, Length=161, Percent_Identity=31.6770186335404, Blast_Score=72, Evalue=5e-13, Organism=Homo sapiens, GI9955963, Length=246, Percent_Identity=25.2032520325203, Blast_Score=69, Evalue=3e-12, Organism=Homo sapiens, GI171184400, Length=228, Percent_Identity=25.4385964912281, Blast_Score=66, Evalue=3e-11, Organism=Escherichia coli, GI87081791, Length=218, Percent_Identity=27.9816513761468, Blast_Score=98, Evalue=4e-22, Organism=Escherichia coli, GI1788761, Length=215, Percent_Identity=30.2325581395349, Blast_Score=93, Evalue=1e-20, Organism=Escherichia coli, GI87081709, Length=216, Percent_Identity=28.7037037037037, Blast_Score=92, Evalue=4e-20, Organism=Escherichia coli, GI1788165, Length=198, Percent_Identity=30.8080808080808, Blast_Score=89, Evalue=2e-19, Organism=Escherichia coli, GI1790739, Length=217, Percent_Identity=28.110599078341, Blast_Score=87, Evalue=7e-19, Organism=Escherichia coli, GI1786319, Length=239, Percent_Identity=27.1966527196653, Blast_Score=87, Evalue=7e-19, Organism=Escherichia coli, GI1790467, Length=219, Percent_Identity=26.4840182648402, Blast_Score=86, Evalue=2e-18, Organism=Escherichia coli, GI1786253, Length=222, Percent_Identity=25.6756756756757, Blast_Score=83, Evalue=1e-17, Organism=Escherichia coli, GI1787041, Length=202, Percent_Identity=32.6732673267327, Blast_Score=83, Evalue=2e-17, Organism=Escherichia coli, GI1786698, Length=211, Percent_Identity=27.4881516587678, Blast_Score=78, Evalue=6e-16, Organism=Escherichia coli, GI87082267, Length=218, Percent_Identity=24.7706422018349, Blast_Score=77, Evalue=8e-16, Organism=Escherichia coli, GI1786563, Length=219, Percent_Identity=24.6575342465753, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI1786803, Length=211, Percent_Identity=26.5402843601896, Blast_Score=75, Evalue=3e-15, Organism=Escherichia coli, GI1787029, Length=247, Percent_Identity=27.1255060728745, Blast_Score=75, Evalue=3e-15, Organism=Escherichia coli, GI1789672, Length=224, Percent_Identity=26.3392857142857, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI87081782, Length=211, Percent_Identity=26.5402843601896, Blast_Score=72, Evalue=2e-14, Organism=Escherichia coli, GI1790525, Length=251, Percent_Identity=26.6932270916335, Blast_Score=71, Evalue=6e-14, Organism=Escherichia coli, GI1789593, Length=209, Percent_Identity=26.7942583732057, Blast_Score=71, Evalue=7e-14, Organism=Escherichia coli, GI1786975, Length=215, Percent_Identity=25.5813953488372, Blast_Score=68, Evalue=6e-13, Organism=Escherichia coli, GI1788472, Length=245, Percent_Identity=26.9387755102041, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI1788450, Length=223, Percent_Identity=25.5605381165919, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI87081834, Length=229, Percent_Identity=25.3275109170306, Blast_Score=63, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17510237, Length=221, Percent_Identity=27.6018099547511, Blast_Score=88, Evalue=4e-18, Organism=Caenorhabditis elegans, GI193202349, Length=223, Percent_Identity=28.2511210762332, Blast_Score=84, Evalue=7e-17, Organism=Caenorhabditis elegans, GI25146777, Length=234, Percent_Identity=27.7777777777778, Blast_Score=84, Evalue=9e-17, Organism=Caenorhabditis elegans, GI17558664, Length=222, Percent_Identity=28.3783783783784, Blast_Score=80, Evalue=8e-16, Organism=Caenorhabditis elegans, GI115533608, Length=210, Percent_Identity=28.5714285714286, Blast_Score=80, Evalue=9e-16, Organism=Caenorhabditis elegans, GI17565938, Length=214, Percent_Identity=28.5046728971963, Blast_Score=79, Evalue=2e-15, Organism=Caenorhabditis elegans, GI115533592, Length=204, Percent_Identity=28.921568627451, Blast_Score=79, Evalue=2e-15, Organism=Caenorhabditis elegans, GI193208177, Length=213, Percent_Identity=25.3521126760563, Blast_Score=76, Evalue=1e-14, Organism=Caenorhabditis elegans, GI17565586, Length=194, Percent_Identity=27.319587628866, Blast_Score=76, Evalue=1e-14, Organism=Caenorhabditis elegans, GI115535101, Length=231, Percent_Identity=29.4372294372294, Blast_Score=75, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17569145, Length=203, Percent_Identity=25.1231527093596, Blast_Score=74, Evalue=6e-14, Organism=Caenorhabditis elegans, GI193211017, Length=207, Percent_Identity=25.6038647342995, Blast_Score=73, Evalue=1e-13, Organism=Caenorhabditis elegans, GI193211015, Length=207, Percent_Identity=25.6038647342995, Blast_Score=73, Evalue=1e-13, Organism=Caenorhabditis elegans, GI71996809, Length=241, Percent_Identity=26.1410788381743, Blast_Score=73, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17567265, Length=222, Percent_Identity=27.027027027027, Blast_Score=71, Evalue=4e-13, Organism=Caenorhabditis elegans, GI17567269, Length=208, Percent_Identity=27.4038461538462, Blast_Score=71, Evalue=5e-13, Organism=Caenorhabditis elegans, GI193202878, Length=187, Percent_Identity=27.2727272727273, Blast_Score=69, Evalue=2e-12, Organism=Caenorhabditis elegans, GI71984940, Length=205, Percent_Identity=25.3658536585366, Blast_Score=64, Evalue=6e-11, Organism=Saccharomyces cerevisiae, GI6324985, Length=224, Percent_Identity=26.7857142857143, Blast_Score=72, Evalue=7e-14, Organism=Saccharomyces cerevisiae, GI6323959, Length=207, Percent_Identity=26.0869565217391, Blast_Score=70, Evalue=2e-13, Organism=Saccharomyces cerevisiae, GI6321121, Length=216, Percent_Identity=28.7037037037037, Blast_Score=70, Evalue=3e-13, Organism=Drosophila melanogaster, GI24666092, Length=226, Percent_Identity=29.2035398230088, Blast_Score=91, Evalue=7e-19, Organism=Drosophila melanogaster, GI24643674, Length=239, Percent_Identity=27.6150627615063, Blast_Score=89, Evalue=2e-18, Organism=Drosophila melanogaster, GI24582014, Length=235, Percent_Identity=28.0851063829787, Blast_Score=86, Evalue=2e-17, Organism=Drosophila melanogaster, GI24582012, Length=235, Percent_Identity=28.0851063829787, Blast_Score=86, Evalue=2e-17, Organism=Drosophila melanogaster, GI24648314, Length=211, Percent_Identity=28.9099526066351, Blast_Score=80, Evalue=1e-15, Organism=Drosophila melanogaster, GI281362751, Length=229, Percent_Identity=27.9475982532751, Blast_Score=80, Evalue=1e-15, Organism=Drosophila melanogaster, GI17136662, Length=209, Percent_Identity=27.2727272727273, Blast_Score=79, Evalue=2e-15, Organism=Drosophila melanogaster, GI24650855, Length=237, Percent_Identity=27.8481012658228, Blast_Score=78, Evalue=6e-15, Organism=Drosophila melanogaster, GI24650853, Length=237, Percent_Identity=27.8481012658228, Blast_Score=78, Evalue=6e-15, Organism=Drosophila melanogaster, GI85726357, Length=204, Percent_Identity=29.4117647058824, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI281363262, Length=233, Percent_Identity=28.3261802575107, Blast_Score=75, Evalue=3e-14, Organism=Drosophila melanogaster, GI21357907, Length=220, Percent_Identity=29.5454545454545, Blast_Score=75, Evalue=4e-14, Organism=Drosophila melanogaster, GI24653245, Length=233, Percent_Identity=28.3261802575107, Blast_Score=75, Evalue=4e-14, Organism=Drosophila melanogaster, GI221512771, Length=230, Percent_Identity=24.7826086956522, Blast_Score=75, Evalue=5e-14, Organism=Drosophila melanogaster, GI85725262, Length=189, Percent_Identity=28.5714285714286, Blast_Score=74, Evalue=6e-14, Organism=Drosophila melanogaster, GI24643672, Length=212, Percent_Identity=26.4150943396226, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI28573571, Length=238, Percent_Identity=24.7899159663866, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI24659289, Length=208, Percent_Identity=28.8461538461538, Blast_Score=68, Evalue=6e-12, Organism=Drosophila melanogaster, GI161076684, Length=183, Percent_Identity=26.2295081967213, Blast_Score=65, Evalue=3e-11, Organism=Drosophila melanogaster, GI24581617, Length=183, Percent_Identity=26.2295081967213, Blast_Score=65, Evalue=3e-11, Organism=Drosophila melanogaster, GI24581615, Length=183, Percent_Identity=26.2295081967213, Blast_Score=65, Evalue=3e-11, Organism=Drosophila melanogaster, GI161076682, Length=183, Percent_Identity=26.2295081967213, Blast_Score=65, Evalue=3e-11, Organism=Drosophila melanogaster, GI221500365, Length=208, Percent_Identity=23.0769230769231, Blast_Score=64, Evalue=6e-11, Organism=Drosophila melanogaster, GI116007184, Length=208, Percent_Identity=23.0769230769231, Blast_Score=64, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR003593 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: NA
Molecular weight: Translated: 26235; Mature: 26235
Theoretical pI: Translated: 9.69; Mature: 9.69
Prosite motif: PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNIIEISNLKKAFKNKVVLNNLNLDIKEGERVAIMGANGCGKTTLVEMIAQFNNPDKGT CCCCHHHHHHHHHHHCCEEEECCCEEECCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCE IKINLEGNIKNEIGIQLQTGDPAGITPLDMLAFYRSIYPKFTKEENTIADVFDIKEFIKT EEEEECCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH PLKKLSGGQKQRFNAMISVMNNPKIVILDELTTGLDMELQYKITDFFRENVKKSKQTLLL HHHHHCCCHHHHHHHHHHCCCCCCEEEEECCCCCCCEEEEHHHHHHHHHHHHHHHHEEEE VSHHPEEVEILCDRIIIIKDGGIFFDKKISAVIKKYGSVRDLMNLFFKGELK EECCCHHHHEEECEEEEEECCCEEEHHHHHHHHHHHCCHHHHHHHHHCCCCC >Mature Secondary Structure MKNIIEISNLKKAFKNKVVLNNLNLDIKEGERVAIMGANGCGKTTLVEMIAQFNNPDKGT CCCCHHHHHHHHHHHCCEEEECCCEEECCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCE IKINLEGNIKNEIGIQLQTGDPAGITPLDMLAFYRSIYPKFTKEENTIADVFDIKEFIKT EEEEECCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH PLKKLSGGQKQRFNAMISVMNNPKIVILDELTTGLDMELQYKITDFFRENVKKSKQTLLL HHHHHCCCHHHHHHHHHHCCCCCCEEEEECCCCCCCEEEEHHHHHHHHHHHHHHHHEEEE VSHHPEEVEILCDRIIIIKDGGIFFDKKISAVIKKYGSVRDLMNLFFKGELK EECCCHHHHEEECEEEEEECCCEEEHHHHHHHHHHHCCHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; putrescine [Periplasm]; H2O [C]
Specific reaction: ATP + putrescine [Periplasm] + H2O = ADP + phosphate + putrescine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]