| Definition | Mesoplasma florum L1, complete genome. |
|---|---|
| Accession | NC_006055 |
| Length | 793,224 |
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The map label for this gene is ywkE [H]
Identifier: 50365448
GI number: 50365448
Start: 739019
End: 739921
Strand: Reverse
Name: ywkE [H]
Synonym: Mfl633
Alternate gene names: 50365448
Gene position: 739921-739019 (Counterclockwise)
Preceding gene: 50365449
Following gene: 50365447
Centisome position: 93.28
GC content: 21.15
Gene sequence:
>903_bases ATGATGAACAACGTCAGAAAGTTGAAGCACAATTACAAGATAATGAATAATGCAAATATAAAAATTGCTTTAGATTTTCT TTTAGAAAATAGTAAAATTGGAAAATCGGATGCTATTGAAATTATTTCATTTATTACAAAAATTGAATACTCAGAAGTTT TATTTTCACAAGAAAAAGTTTTAAATAAAAAACAATTTAAAAAAATAATCAAAATTTCTAAAAAGTTAGCTAAAGGGAAA CCTTTAGCTTATATTTTAGGATACAAAATTTTTAGGACTCATAAAATTTTAGTAAATAAAAATACTTTAATACCAAGAAT GGAAACTGAACTTATTGTTGATTATGTTAATGAATTTATCAATTCTCAAAATGAAAAAATTTCAGTATTAGATCTTTGTT GTGGTTCGGGTTGTATAGGAATTTCTATAGCTATAGAAAACAAAGATAAAATGGAAAATGTTACATTCTCAGATATTTCT AAAAAAGCGTTAAATATAACTAGTAAAAATATTGAAAATAATAATTTAGTAAATTGAACAAAAGTTGTTAAAAGTGATTT TTTAAATTCTATTATAAAACAACAAAATAAATTTAACATTCTTGTTTGTAACCCACCATATATTGATTTTAATGATGTTG ATGTAGATAAAATGACAAAAAAATATGAACCAAAATTAGCACTTTTCGCAAAAGATAATGGATTGTTTTTTTATAAGGAA GCAATTAAAAATATTGATAAATTTATGGATATTACAAAAAATATACTAATTGTTTTTGAAATAGGGTGAAAACAAGAAAA AGAGCTAGATGTCTTTTTAAAACAAGAATTAGGTTTAAAATATAAATGAAAGTTTGAAAAAGATTATTTTAATAATTTAA GATATTTAATACTTACTAAGTAG
Upstream 100 bases:
>100_bases CCACAAAATCGTGTAACTGATCATAGAGTAGGTTTAACACTAAACAAACTGGATCAAGTTATGGAAGGAAAAATTGATGA TTTTATTATTGCCTTAGTTA
Downstream 100 bases:
>100_bases GAGATAAGATGGAAAAAAAGATTGAATTTAAAAGTAAATTCAGACTGAACTTTGCAATAAAAGACAAAGTTGCTTCTGTT CAAGAAAAAAATGCACACTT
Product: polypeptide chain release factor methylase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 300; Mature: 300
Protein sequence:
>300_residues MMNNVRKLKHNYKIMNNANIKIALDFLLENSKIGKSDAIEIISFITKIEYSEVLFSQEKVLNKKQFKKIIKISKKLAKGK PLAYILGYKIFRTHKILVNKNTLIPRMETELIVDYVNEFINSQNEKISVLDLCCGSGCIGISIAIENKDKMENVTFSDIS KKALNITSKNIENNNLVNWTKVVKSDFLNSIIKQQNKFNILVCNPPYIDFNDVDVDKMTKKYEPKLALFAKDNGLFFYKE AIKNIDKFMDITKNILIVFEIGWKQEKELDVFLKQELGLKYKWKFEKDYFNNLRYLILTK
Sequences:
>Translated_300_residues MMNNVRKLKHNYKIMNNANIKIALDFLLENSKIGKSDAIEIISFITKIEYSEVLFSQEKVLNKKQFKKIIKISKKLAKGK PLAYILGYKIFRTHKILVNKNTLIPRMETELIVDYVNEFINSQNEKISVLDLCCGSGCIGISIAIENKDKMENVTFSDIS KKALNITSKNIENNNLVN*TKVVKSDFLNSIIKQQNKFNILVCNPPYIDFNDVDVDKMTKKYEPKLALFAKDNGLFFYKE AIKNIDKFMDITKNILIVFEIG*KQEKELDVFLKQELGLKYK*KFEKDYFNNLRYLILTK >Mature_300_residues MMNNVRKLKHNYKIMNNANIKIALDFLLENSKIGKSDAIEIISFITKIEYSEVLFSQEKVLNKKQFKKIIKISKKLAKGK PLAYILGYKIFRTHKILVNKNTLIPRMETELIVDYVNEFINSQNEKISVLDLCCGSGCIGISIAIENKDKMENVTFSDIS KKALNITSKNIENNNLVN*TKVVKSDFLNSIIKQQNKFNILVCNPPYIDFNDVDVDKMTKKYEPKLALFAKDNGLFFYKE AIKNIDKFMDITKNILIVFEIG*KQEKELDVFLKQELGLKYK*KFEKDYFNNLRYLILTK
Specific function: Probable protein methyltransferase. May methylate a Gln residue in target proteins [H]
COG id: COG2890
COG function: function code J; Methylase of polypeptide chain release factors
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hemK family [H]
Homologues:
Organism=Escherichia coli, GI1787463, Length=272, Percent_Identity=26.8382352941176, Blast_Score=103, Evalue=9e-24, Organism=Escherichia coli, GI87082085, Length=205, Percent_Identity=27.8048780487805, Blast_Score=92, Evalue=3e-20, Organism=Saccharomyces cerevisiae, GI6324266, Length=162, Percent_Identity=31.4814814814815, Blast_Score=75, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002052 - InterPro: IPR004556 - InterPro: IPR019874 - InterPro: IPR007848 [H]
Pfam domain/function: PF05175 MTS [H]
EC number: 2.1.1.-
Molecular weight: Translated: 34473; Mature: 34473
Theoretical pI: Translated: 9.99; Mature: 9.99
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMNNVRKLKHNYKIMNNANIKIALDFLLENSKIGKSDAIEIISFITKIEYSEVLFSQEKV CCCHHHHHHHCEEEEECCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH LNKKQFKKIIKISKKLAKGKPLAYILGYKIFRTHKILVNKNTLIPRMETELIVDYVNEFI HCHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHEEEEEEECCCCCCCHHHHHHHHHHHHHH NSQNEKISVLDLCCGSGCIGISIAIENKDKMENVTFSDISKKALNITSKNIENNNLVNTK CCCCCEEEEEEEECCCCCEEEEEEECCCHHHCCCCHHHHHHHHHHHHHCCCCCCCCEEHH VVKSDFLNSIIKQQNKFNILVCNPPYIDFNDVDVDKMTKKYEPKLALFAKDNGLFFYKEA HHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHCCCCEEEEEECCCEEEHHHH IKNIDKFMDITKNILIVFEIGKQEKELDVFLKQELGLKYKKFEKDYFNNLRYLILTK HHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHCCEEEEEEEC >Mature Secondary Structure MMNNVRKLKHNYKIMNNANIKIALDFLLENSKIGKSDAIEIISFITKIEYSEVLFSQEKV CCCHHHHHHHCEEEEECCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH LNKKQFKKIIKISKKLAKGKPLAYILGYKIFRTHKILVNKNTLIPRMETELIVDYVNEFI HCHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHEEEEEEECCCCCCCHHHHHHHHHHHHHH NSQNEKISVLDLCCGSGCIGISIAIENKDKMENVTFSDISKKALNITSKNIENNNLVNTK CCCCCEEEEEEEECCCCCEEEEEEECCCHHHCCCCHHHHHHHHHHHHHCCCCCCCCEEHH VVKSDFLNSIIKQQNKFNILVCNPPYIDFNDVDVDKMTKKYEPKLALFAKDNGLFFYKEA HHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHCCCCEEEEEECCCEEEHHHH IKNIDKFMDITKNILIVFEIGKQEKELDVFLKQELGLKYKKFEKDYFNNLRYLILTK HHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9353933; 9384377 [H]