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The map label for this gene is scpA [H]

Identifier: 50365367

GI number: 50365367

Start: 642605

End: 643438

Strand: Reverse

Name: scpA [H]

Synonym: Mfl550

Alternate gene names: 50365367

Gene position: 643438-642605 (Counterclockwise)

Preceding gene: 50365368

Following gene: 50365366

Centisome position: 81.12

GC content: 26.86

Gene sequence:

>834_bases
ATGCAACATTGAGACGAATTAAATATTTCCAATTTCTCAGGTCCTTTAGACCTATTGTGAAACATGGTTAAAGATAAAAA
GATTGATATCTTTGAAATTAATTTAAGTGAAATAATTGATCAATATTTAAAATATATTGAGGGACAACAAAAATTAGATA
TTGAATTAGCTAGTGAATATTTAGTTTTAGCAGCTCAAATGATTGAAATGAAATCAAGAATATTGCTTCCAAATGACGAT
GATGATTCTGAAGAAGAATTGATGTTTGAGGATTTATTGGAGCAAATTAATCAATATGGACAAATTAAAGAAGTTAGTGA
ATATTTCTATAATAAACAAGAAGAATATTTAAAGACTTTTTCAAAACCAAAAACAAAAAAATCATTTATTCAATCTATTG
CAGATAGAAATGATGAACTAATGGTAAACCCACTTGATATTGGTATTGACGAATTCGCTGAAATATTCCAATCAATTTTA
CAAAGAGCTCAAAACTTTGATGAAGATTTTGAGTATGATGAAAATATGTTGTTAGAAGATGCTTATGCACCTATCCAAAA
TGAAATTATTTCTCCACAAGTAATTGCAAGATCAATTGTTGATGTTATGAAAACAAACAAACATAAAGAGTGAAGACTTG
AAGAAGTTATCACTGGATATGAATTAAACTTAATTAATTTAATTTCAACTTTTTTAGCTGTACTAGATATGGTAAGACAT
CAAGTTGCTGTTATTAATCAAAAGAATGATACATTAGAATTTAGATTCACATCTGAAGCTTTAGCTGATGAATCTGTATT
AAGAAGAATAGAAGAGGTAGAAGAATATGAATAG

Upstream 100 bases:

>100_bases
ACGATGACGAATTACTAAAATTAATAAAATTAAATCAAGTTAATAAATAGGAAAAGAATTTTATTTATTATAAAATAGTA
AATAAACAAGGAGAAATAAC

Downstream 100 bases:

>100_bases
CAATATTAAAGCAATAGTTGAGGGTTTATTATTCGTATATGGTGATGATGGTATTAGTTTACTAGACTTACAAAATGTAC
TTGAAGATGTTAGACCAGTT

Product: chromosomal segregation/condensation protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 277; Mature: 277

Protein sequence:

>277_residues
MQHWDELNISNFSGPLDLLWNMVKDKKIDIFEINLSEIIDQYLKYIEGQQKLDIELASEYLVLAAQMIEMKSRILLPNDD
DDSEEELMFEDLLEQINQYGQIKEVSEYFYNKQEEYLKTFSKPKTKKSFIQSIADRNDELMVNPLDIGIDEFAEIFQSIL
QRAQNFDEDFEYDENMLLEDAYAPIQNEIISPQVIARSIVDVMKTNKHKEWRLEEVITGYELNLINLISTFLAVLDMVRH
QVAVINQKNDTLEFRFTSEALADESVLRRIEEVEEYE

Sequences:

>Translated_277_residues
MQH*DELNISNFSGPLDLL*NMVKDKKIDIFEINLSEIIDQYLKYIEGQQKLDIELASEYLVLAAQMIEMKSRILLPNDD
DDSEEELMFEDLLEQINQYGQIKEVSEYFYNKQEEYLKTFSKPKTKKSFIQSIADRNDELMVNPLDIGIDEFAEIFQSIL
QRAQNFDEDFEYDENMLLEDAYAPIQNEIISPQVIARSIVDVMKTNKHKE*RLEEVITGYELNLINLISTFLAVLDMVRH
QVAVINQKNDTLEFRFTSEALADESVLRRIEEVEEYE
>Mature_277_residues
MQH*DELNISNFSGPLDLL*NMVKDKKIDIFEINLSEIIDQYLKYIEGQQKLDIELASEYLVLAAQMIEMKSRILLPNDD
DDSEEELMFEDLLEQINQYGQIKEVSEYFYNKQEEYLKTFSKPKTKKSFIQSIADRNDELMVNPLDIGIDEFAEIFQSIL
QRAQNFDEDFEYDENMLLEDAYAPIQNEIISPQVIARSIVDVMKTNKHKE*RLEEVITGYELNLINLISTFLAVLDMVRH
QVAVINQKNDTLEFRFTSEALADESVLRRIEEVEEYE

Specific function: Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing smc and scpB that pull DNA away from mid-cell into both cell halves [H]

COG id: COG1354

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm. Note=Associated with two foci at the outer edges of the nucleoid region in young cells, and at four foci within both cell halves in older cells (By similarity) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the scpA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003768 [H]

Pfam domain/function: PF02616 ScpA_ScpB [H]

EC number: NA

Molecular weight: Translated: 32107; Mature: 32107

Theoretical pI: Translated: 4.02; Mature: 4.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQHDELNISNFSGPLDLLNMVKDKKIDIFEINLSEIIDQYLKYIEGQQKLDIELASEYLV
CCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHCCCHHHHHHHHHHHHH
LAAQMIEMKSRILLPNDDDDSEEELMFEDLLEQINQYGQIKEVSEYFYNKQEEYLKTFSK
HHHHHHHHHHCEECCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHCC
PKTKKSFIQSIADRNDELMVNPLDIGIDEFAEIFQSILQRAQNFDEDFEYDENMLLEDAY
CCHHHHHHHHHHCCCCCEEECHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH
APIQNEIISPQVIARSIVDVMKTNKHKERLEEVITGYELNLINLISTFLAVLDMVRHQVA
CHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
VINQKNDTLEFRFTSEALADESVLRRIEEVEEYE
HHCCCCCEEEEEECHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MQHDELNISNFSGPLDLLNMVKDKKIDIFEINLSEIIDQYLKYIEGQQKLDIELASEYLV
CCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHCCCHHHHHHHHHHHHH
LAAQMIEMKSRILLPNDDDDSEEELMFEDLLEQINQYGQIKEVSEYFYNKQEEYLKTFSK
HHHHHHHHHHCEECCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHCC
PKTKKSFIQSIADRNDELMVNPLDIGIDEFAEIFQSILQRAQNFDEDFEYDENMLLEDAY
CCHHHHHHHHHHCCCCCEEECHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH
APIQNEIISPQVIARSIVDVMKTNKHKERLEEVITGYELNLINLISTFLAVLDMVRHQVA
CHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
VINQKNDTLEFRFTSEALADESVLRRIEEVEEYE
HHCCCCCEEEEEECHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12122206; 12799345 [H]