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The map label for this gene is ycgN [C]

Identifier: 50086551

GI number: 50086551

Start: 3518608

End: 3519090

Strand: Reverse

Name: ycgN [C]

Synonym: ACIAD3601

Alternate gene names: 50086551

Gene position: 3519090-3518608 (Counterclockwise)

Preceding gene: 50086558

Following gene: 50086549

Centisome position: 97.79

GC content: 43.48

Gene sequence:

>483_bases
ATGAGGTATCACCTCCAAATTGATTGCACTATGAACCCTGAGTTACGTCCGTTTTTCTGGAAACATTATGCGCTTGATGC
ACTCAATCAGGCGGAATGGGAGGCGCTTTGTGACGGCTGTGGTTTGTGCTGTTTAATCAAACTTGAAGATGAAGAGACGA
ATGAAATTGCTTATACCAAAGTGGCGTGTAAACTTCTAGATTGTAAAACAGCACGTTGTTCAGATTACGCTGATCGACAT
CAATCGGTTCCAGACTGTATTCAACTGACTCCAGAGAAATTACAACATATTCGCTGGCTACCCTCTAGCTGCGCATATAG
ACGTTTAAATGAAGGCAAGAATTTACCTTCATGGCATTATCTGAATACAGGCTCACGCCAAAGTGTCATCAAGGCGCGTA
AGTCTGCTGCGGGGCGCTGTATTTCGGAAACTGATGTACAAGAGGACGACATCGAAGATTACATTGTACGTTGGATTCGT
TAA

Upstream 100 bases:

>100_bases
TATGTGTTGTTTATGTTTGGAATGTGTATATTCTATTGAATCATCTCAGTATATTGTTACAAAACCCTTGTAAACGATGC
AAAACAGAAACAGTGTTATA

Downstream 100 bases:

>100_bases
TCGCCCTGTATTTTCTGTAATGTATGTTCACTGTGGCGCTCACGAAGTGACTGCTGTGTAATGGTCCATGCAGCACTTAA
GCCCAAAAATGCCATAATAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 160; Mature: 160

Protein sequence:

>160_residues
MRYHLQIDCTMNPELRPFFWKHYALDALNQAEWEALCDGCGLCCLIKLEDEETNEIAYTKVACKLLDCKTARCSDYADRH
QSVPDCIQLTPEKLQHIRWLPSSCAYRRLNEGKNLPSWHYLNTGSRQSVIKARKSAAGRCISETDVQEDDIEDYIVRWIR

Sequences:

>Translated_160_residues
MRYHLQIDCTMNPELRPFFWKHYALDALNQAEWEALCDGCGLCCLIKLEDEETNEIAYTKVACKLLDCKTARCSDYADRH
QSVPDCIQLTPEKLQHIRWLPSSCAYRRLNEGKNLPSWHYLNTGSRQSVIKARKSAAGRCISETDVQEDDIEDYIVRWIR
>Mature_160_residues
MRYHLQIDCTMNPELRPFFWKHYALDALNQAEWEALCDGCGLCCLIKLEDEETNEIAYTKVACKLLDCKTARCSDYADRH
QSVPDCIQLTPEKLQHIRWLPSSCAYRRLNEGKNLPSWHYLNTGSRQSVIKARKSAAGRCISETDVQEDDIEDYIVRWIR

Specific function: Unknown

COG id: COG2983

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0260 family [H]

Homologues:

Organism=Escherichia coli, GI145693117, Length=138, Percent_Identity=49.2753623188406, Blast_Score=137, Evalue=5e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008228
- InterPro:   IPR005358 [H]

Pfam domain/function: PF03692 UPF0153 [H]

EC number: NA

Molecular weight: Translated: 18658; Mature: 18658

Theoretical pI: Translated: 6.34; Mature: 6.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.9 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
8.1 %Cys+Met (Translated Protein)
6.9 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
8.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYHLQIDCTMNPELRPFFWKHYALDALNQAEWEALCDGCGLCCLIKLEDEETNEIAYTK
CEEEEEEEEEECCCCCHHHHHHHHHHHCCHHHHHHHHCCCCEEEEEEECCCCCCHHHHHH
VACKLLDCKTARCSDYADRHQSVPDCIQLTPEKLQHIRWLPSSCAYRRLNEGKNLPSWHY
HHHHHHHCCCCCCCHHHHHHCCCCHHHHCCHHHHHHHHCCCCHHHHHHHHCCCCCCCEEE
LNTGSRQSVIKARKSAAGRCISETDVQEDDIEDYIVRWIR
ECCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCC
>Mature Secondary Structure
MRYHLQIDCTMNPELRPFFWKHYALDALNQAEWEALCDGCGLCCLIKLEDEETNEIAYTK
CEEEEEEEEEECCCCCHHHHHHHHHHHCCHHHHHHHHCCCCEEEEEEECCCCCCHHHHHH
VACKLLDCKTARCSDYADRHQSVPDCIQLTPEKLQHIRWLPSSCAYRRLNEGKNLPSWHY
HHHHHHHCCCCCCCHHHHHHCCCCHHHHCCHHHHHHHHCCCCHHHHHHHHCCCCCCCEEE
LNTGSRQSVIKARKSAAGRCISETDVQEDDIEDYIVRWIR
ECCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA