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The map label for this gene is yjcH [H]

Identifier: 50086427

GI number: 50086427

Start: 3389713

End: 3390045

Strand: Reverse

Name: yjcH [H]

Synonym: ACIAD3464

Alternate gene names: 50086427

Gene position: 3390045-3389713 (Counterclockwise)

Preceding gene: 50086430

Following gene: 50086426

Centisome position: 94.2

GC content: 38.44

Gene sequence:

>333_bases
ATGGATGACGTTCAGGTAGAGCGAATTCTACAAAATCCCAAATTTAAAAAAATGGTGAGCAAGAAAGCAACATTGAGTTG
GACACTGACTATCATCATGCTCATTGTCTATGTTGGGTTCATGCTACTGGTGGGATATAACAAAGAGTTTTTGATGAGTT
CATTTAGTGGTGGTGTAACCACGTGGGGAATTCCACTGGGTTTAGGCATCATTGTTCTGTCATTTGTTCTATGTGGTGTC
TATTCGTACATTGCAAACAATACACTCGATCAACTCAATGAAGAAGCATTGAGAGAAGTCGAAAATATTACTCATGAAAA
AGGACTGCACTAA

Upstream 100 bases:

>100_bases
AAGTCTAAGTTACGAACCTCATACAAGATTGTTAACGTTATAGCGTGAAGAAAAAGGATTAAAAAGCGCCCAACGATGGC
CGCGATATAAGGAGTAGATT

Downstream 100 bases:

>100_bases
GATGAAATGGAATTCATTCAAAGCGTTGGCTTTAATGGCAGTTGGAGTACTCTTCTCTACACTTGCGATGGCAAGTCCTG
ATCTGGGTCAGTCAGAGCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 110; Mature: 110

Protein sequence:

>110_residues
MDDVQVERILQNPKFKKMVSKKATLSWTLTIIMLIVYVGFMLLVGYNKEFLMSSFSGGVTTWGIPLGLGIIVLSFVLCGV
YSYIANNTLDQLNEEALREVENITHEKGLH

Sequences:

>Translated_110_residues
MDDVQVERILQNPKFKKMVSKKATLSWTLTIIMLIVYVGFMLLVGYNKEFLMSSFSGGVTTWGIPLGLGIIVLSFVLCGV
YSYIANNTLDQLNEEALREVENITHEKGLH
>Mature_110_residues
MDDVQVERILQNPKFKKMVSKKATLSWTLTIIMLIVYVGFMLLVGYNKEFLMSSFSGGVTTWGIPLGLGIIVLSFVLCGV
YSYIANNTLDQLNEEALREVENITHEKGLH

Specific function: Unknown

COG id: COG3162

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790504, Length=102, Percent_Identity=41.1764705882353, Blast_Score=84, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007436 [H]

Pfam domain/function: PF04341 DUF485 [H]

EC number: NA

Molecular weight: Translated: 12385; Mature: 12385

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDDVQVERILQNPKFKKMVSKKATLSWTLTIIMLIVYVGFMLLVGYNKEFLMSSFSGGVT
CCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCC
TWGIPLGLGIIVLSFVLCGVYSYIANNTLDQLNEEALREVENITHEKGLH
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MDDVQVERILQNPKFKKMVSKKATLSWTLTIIMLIVYVGFMLLVGYNKEFLMSSFSGGVT
CCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCC
TWGIPLGLGIIVLSFVLCGVYSYIANNTLDQLNEEALREVENITHEKGLH
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8265357; 9278503 [H]