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The map label for this gene is 50086182

Identifier: 50086182

GI number: 50086182

Start: 3115504

End: 3116085

Strand: Reverse

Name: 50086182

Synonym: ACIAD3185

Alternate gene names: NA

Gene position: 3116085-3115504 (Counterclockwise)

Preceding gene: 50086183

Following gene: 50086181

Centisome position: 86.59

GC content: 38.14

Gene sequence:

>582_bases
ATGAATAAAGATCATTTTCTCATTTCGAGAATTATTTTTATTGCATGGTGTGCCTCGATTTCTGCATGTATGCAAGTCTT
CTCTGATCGCTTTATCTATTGGCGAGAAGATTTACCACAACAGTTCTGGCGGTTTTGGACAGCGCATTGGGTGCATGTGG
GATGGATGCATTTTGTATTAAATATGCTGGCATTTGCTTGTTTGCCATTTATTTTTCCACAGAGCAAAAATTGGCAATTG
CTAATTTTAATCTTATGTATTTCTCCGATCATTAGCCTGGGTTTCTATTGGTTTATGCCATATATCAGTGCATATGCAGG
TTTTTCTGGTGTGTTGCATGGTCTATATGTTGCTGTTGCTTTAGTTTCTCTTAAATATAAAAAAGAAAGAAACTTTGCAG
GTTTGGTACTAGGTTTGGTCATCGCCAAGATCGTTTGGGAAAATACATTTGGAAATACAGGCACAGCTCAATTGATAGGA
AGTCCTGTATTGATAGAGTCACATTTGCTCGGGGCTTTGAGTGGTGCTTTGGCGGGATCTGTCTATTTATGCTGGATTAA
ACTCAAAGTGAGAGTAAGTTGA

Upstream 100 bases:

>100_bases
ACAGCTGCAAAATAAAAAATAAAGTAGAACATAGTTTTACGCTCATAAAATCATCATGATCGTAAGGCGGGGCACACGAT
GTAATAGGGAGATGAACTAA

Downstream 100 bases:

>100_bases
CAAAATAAACCTAGAAAAAAATGATTCAAGTCATTCTTTCACTATGTCGTTTATTGCAAAGATACATCAATAAAAGAATG
GCTGAAAGGTATCAACCGAT

Product: hypothetical protein

Products: NA

Alternate protein names: Rhomboid Family Peptidase

Number of amino acids: Translated: 193; Mature: 193

Protein sequence:

>193_residues
MNKDHFLISRIIFIAWCASISACMQVFSDRFIYWREDLPQQFWRFWTAHWVHVGWMHFVLNMLAFACLPFIFPQSKNWQL
LILILCISPIISLGFYWFMPYISAYAGFSGVLHGLYVAVALVSLKYKKERNFAGLVLGLVIAKIVWENTFGNTGTAQLIG
SPVLIESHLLGALSGALAGSVYLCWIKLKVRVS

Sequences:

>Translated_193_residues
MNKDHFLISRIIFIAWCASISACMQVFSDRFIYWREDLPQQFWRFWTAHWVHVGWMHFVLNMLAFACLPFIFPQSKNWQL
LILILCISPIISLGFYWFMPYISAYAGFSGVLHGLYVAVALVSLKYKKERNFAGLVLGLVIAKIVWENTFGNTGTAQLIG
SPVLIESHLLGALSGALAGSVYLCWIKLKVRVS
>Mature_193_residues
MNKDHFLISRIIFIAWCASISACMQVFSDRFIYWREDLPQQFWRFWTAHWVHVGWMHFVLNMLAFACLPFIFPQSKNWQL
LILILCISPIISLGFYWFMPYISAYAGFSGVLHGLYVAVALVSLKYKKERNFAGLVLGLVIAKIVWENTFGNTGTAQLIG
SPVLIESHLLGALSGALAGSVYLCWIKLKVRVS

Specific function: Unknown

COG id: COG0705

COG function: function code R; Uncharacterized membrane protein (homolog of Drosophila rhomboid)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22027; Mature: 22027

Theoretical pI: Translated: 9.45; Mature: 9.45

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKDHFLISRIIFIAWCASISACMQVFSDRFIYWREDLPQQFWRFWTAHWVHVGWMHFVL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NMLAFACLPFIFPQSKNWQLLILILCISPIISLGFYWFMPYISAYAGFSGVLHGLYVAVA
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVSLKYKKERNFAGLVLGLVIAKIVWENTFGNTGTAQLIGSPVLIESHLLGALSGALAGS
HHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHH
VYLCWIKLKVRVS
HHEEEEEEEEEEC
>Mature Secondary Structure
MNKDHFLISRIIFIAWCASISACMQVFSDRFIYWREDLPQQFWRFWTAHWVHVGWMHFVL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NMLAFACLPFIFPQSKNWQLLILILCISPIISLGFYWFMPYISAYAGFSGVLHGLYVAVA
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVSLKYKKERNFAGLVLGLVIAKIVWENTFGNTGTAQLIGSPVLIESHLLGALSGALAGS
HHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHH
VYLCWIKLKVRVS
HHEEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA