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The map label for this gene is yneE [H]

Identifier: 50086130

GI number: 50086130

Start: 3053914

End: 3054825

Strand: Direct

Name: yneE [H]

Synonym: ACIAD3127

Alternate gene names: 50086130

Gene position: 3053914-3054825 (Clockwise)

Preceding gene: 50086129

Following gene: 50086132

Centisome position: 84.86

GC content: 42.87

Gene sequence:

>912_bases
ATGATTGTCCGTGACCAAACTGATATTTTTAAATTGCTGTTTTCTTGGCGCGGCACGATTTTACCTAAAATTTTGCCACC
ACTTGGGGTCATTATGTTGATCTCAGCCATAATAGGCGGGATTCAATATACCCAGCTTTTTCATTTCCCAGAATTGCCTC
TTGTTGGCTTCACACTGATTGGTGTTGTGCTGTCCATTTTTTTGGGATTTAAAAATAGTGCCTGTTATGATCGCTGGTGG
GAAGCCCGTAAGCTTTGGGGGCTACTGATTGCAAATGCACGACATTTTGATCGTGATTGTCGCATTTTACCGCAAGGTAG
ACGTGAACGAATTATTCAGCATGTGATTGTATTTGCGAATGTTCTACGTGATCGTTTACGTCATCAAACCGCTAATCCAA
CCGAACTCACTCAAACCAGCGGACTGAGTCAGCAAGCACTCACCCAGCTTTATCAGCAAGTTAATGCACCGCAATATGCG
CTCAGCCTCATCCACTGGGAACTGATGCAAGCGCTTAAAGAAGGTGAGATCAGTGACATTATTTATACCCAGATGAATGG
CTATATTTCTGAATTTAGTCTCGTTCAAACGGGCTGTGACCGTATTGCCAATACGCCTATTCCATTTGCCTATTCAGTTT
TGCTGAATCGCACAGTATATTTCTTCTGCTTTATGCTGCCATTTAGCTTAGGCTCAACACTCGGTCTGGTAACTCCGATT
TTAGTGGGCGTACTCACTTATACCTTTTTGGGACTTGATGCCTTGAGTACCGAGATTGAAGAACCGTTTGGCACCCAAAG
CAATGATTTACCGCTTGATTCAATGGTGCGTATGATTGAGATTGAATTACTCAGTACCTTAGGTAAACCAACACCTCCAC
CCATTCAGGCACAAGATAATAATCTCTTGTAA

Upstream 100 bases:

>100_bases
AACGTGCTTTACTCAGCCAAAAAAAATGCATGCATACAGATATTGACAAACCTGACTTGACTGGTGAAGATCATCACAAA
AAAAGCTGTGATAGATCACC

Downstream 100 bases:

>100_bases
ACCATCGATAGTTTCGACAACTATCCCATCTGAGATGCAACAATGGGCTTGAAGCGCTCTCCAAACTGCCCATTCCAGTA
TGGATAATAAGGATACGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 303; Mature: 303

Protein sequence:

>303_residues
MIVRDQTDIFKLLFSWRGTILPKILPPLGVIMLISAIIGGIQYTQLFHFPELPLVGFTLIGVVLSIFLGFKNSACYDRWW
EARKLWGLLIANARHFDRDCRILPQGRRERIIQHVIVFANVLRDRLRHQTANPTELTQTSGLSQQALTQLYQQVNAPQYA
LSLIHWELMQALKEGEISDIIYTQMNGYISEFSLVQTGCDRIANTPIPFAYSVLLNRTVYFFCFMLPFSLGSTLGLVTPI
LVGVLTYTFLGLDALSTEIEEPFGTQSNDLPLDSMVRMIEIELLSTLGKPTPPPIQAQDNNLL

Sequences:

>Translated_303_residues
MIVRDQTDIFKLLFSWRGTILPKILPPLGVIMLISAIIGGIQYTQLFHFPELPLVGFTLIGVVLSIFLGFKNSACYDRWW
EARKLWGLLIANARHFDRDCRILPQGRRERIIQHVIVFANVLRDRLRHQTANPTELTQTSGLSQQALTQLYQQVNAPQYA
LSLIHWELMQALKEGEISDIIYTQMNGYISEFSLVQTGCDRIANTPIPFAYSVLLNRTVYFFCFMLPFSLGSTLGLVTPI
LVGVLTYTFLGLDALSTEIEEPFGTQSNDLPLDSMVRMIEIELLSTLGKPTPPPIQAQDNNLL
>Mature_303_residues
MIVRDQTDIFKLLFSWRGTILPKILPPLGVIMLISAIIGGIQYTQLFHFPELPLVGFTLIGVVLSIFLGFKNSACYDRWW
EARKLWGLLIANARHFDRDCRILPQGRRERIIQHVIVFANVLRDRLRHQTANPTELTQTSGLSQQALTQLYQQVNAPQYA
LSLIHWELMQALKEGEISDIIYTQMNGYISEFSLVQTGCDRIANTPIPFAYSVLLNRTVYFFCFMLPFSLGSTLGLVTPI
LVGVLTYTFLGLDALSTEIEEPFGTQSNDLPLDSMVRMIEIELLSTLGKPTPPPIQAQDNNLL

Specific function: Unknown

COG id: COG3781

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0187 family [H]

Homologues:

Organism=Escherichia coli, GI87081925, Length=293, Percent_Identity=41.296928327645, Blast_Score=194, Evalue=4e-51,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021134 [H]

Pfam domain/function: PF01062 Bestrophin [H]

EC number: NA

Molecular weight: Translated: 34303; Mature: 34303

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVRDQTDIFKLLFSWRGTILPKILPPLGVIMLISAIIGGIQYTQLFHFPELPLVGFTLI
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHH
GVVLSIFLGFKNSACYDRWWEARKLWGLLIANARHFDRDCRILPQGRRERIIQHVIVFAN
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCHHHHHHHHHHHHHHH
VLRDRLRHQTANPTELTQTSGLSQQALTQLYQQVNAPQYALSLIHWELMQALKEGEISDI
HHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHH
IYTQMNGYISEFSLVQTGCDRIANTPIPFAYSVLLNRTVYFFCFMLPFSLGSTLGLVTPI
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
LVGVLTYTFLGLDALSTEIEEPFGTQSNDLPLDSMVRMIEIELLSTLGKPTPPPIQAQDN
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
NLL
CCC
>Mature Secondary Structure
MIVRDQTDIFKLLFSWRGTILPKILPPLGVIMLISAIIGGIQYTQLFHFPELPLVGFTLI
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHH
GVVLSIFLGFKNSACYDRWWEARKLWGLLIANARHFDRDCRILPQGRRERIIQHVIVFAN
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCHHHHHHHHHHHHHHH
VLRDRLRHQTANPTELTQTSGLSQQALTQLYQQVNAPQYALSLIHWELMQALKEGEISDI
HHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHH
IYTQMNGYISEFSLVQTGCDRIANTPIPFAYSVLLNRTVYFFCFMLPFSLGSTLGLVTPI
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
LVGVLTYTFLGLDALSTEIEEPFGTQSNDLPLDSMVRMIEIELLSTLGKPTPPPIQAQDN
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
NLL
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11677608; 12644504 [H]