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The map label for this gene is yqaA [H]

Identifier: 50086063

GI number: 50086063

Start: 2978610

End: 2979038

Strand: Reverse

Name: yqaA [H]

Synonym: ACIAD3050

Alternate gene names: 50086063

Gene position: 2979038-2978610 (Counterclockwise)

Preceding gene: 50086064

Following gene: 50086060

Centisome position: 82.78

GC content: 39.86

Gene sequence:

>429_bases
ATGATGAGTTATCTGGCCTTATTTATTTCGGCCTTTGGTGCGGCAACTTTACTTCCTTTACAGTCTGAAGCAGTCTTGTT
CTCGCTTCTGGCATTGAAACAGCAATCTGCACTTTTTCTTTTACTGGTTGCAACGATTGGGAATGTATTGGGTTCATGCG
TGAACTGGTGGCTGGGTATTAAGATTGAACAGTTTAAACACAAGAAATGGTTTCCAGTCTCTGAGCGGCACATGCAATCT
GCCCAGAAAATCTATCACCAATATGGTTTTTATTCTCTATTGCTCAGTTGGGTACCTATTATTGGTGACCCAATTACCCT
CATTGCGGGAGTGCTGAAAGAGAATTTTTATCGTTTTATTTTAATGGTGACTTTAGCCAAAGCAGGACGATACGTCTGTA
TTTATTTACTTTATCTGGGATTCTTCTAA

Upstream 100 bases:

>100_bases
TTGCTTAAAAGCAAATTCGATCAGCATAAGATGGACATATTGGATATCAGACTTAAAACTGAGATATTAGCCAGATAATG
TAATCCATGCGACAACGTTT

Downstream 100 bases:

>100_bases
AGGATCTGAATAAATTTTATTTGTTCAGATCCACCATCAGATTTATTGCTGACAGTTATCCAACCTAAATTCGATCTGGT
CTTTTAGACTTGATTTCTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 142; Mature: 142

Protein sequence:

>142_residues
MMSYLALFISAFGAATLLPLQSEAVLFSLLALKQQSALFLLLVATIGNVLGSCVNWWLGIKIEQFKHKKWFPVSERHMQS
AQKIYHQYGFYSLLLSWVPIIGDPITLIAGVLKENFYRFILMVTLAKAGRYVCIYLLYLGFF

Sequences:

>Translated_142_residues
MMSYLALFISAFGAATLLPLQSEAVLFSLLALKQQSALFLLLVATIGNVLGSCVNWWLGIKIEQFKHKKWFPVSERHMQS
AQKIYHQYGFYSLLLSWVPIIGDPITLIAGVLKENFYRFILMVTLAKAGRYVCIYLLYLGFF
>Mature_142_residues
MMSYLALFISAFGAATLLPLQSEAVLFSLLALKQQSALFLLLVATIGNVLGSCVNWWLGIKIEQFKHKKWFPVSERHMQS
AQKIYHQYGFYSLLLSWVPIIGDPITLIAGVLKENFYRFILMVTLAKAGRYVCIYLLYLGFF

Specific function: Unknown

COG id: COG1238

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0489 [H]

Homologues:

Organism=Escherichia coli, GI1789045, Length=135, Percent_Identity=37.037037037037, Blast_Score=75, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 16191; Mature: 16191

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMSYLALFISAFGAATLLPLQSEAVLFSLLALKQQSALFLLLVATIGNVLGSCVNWWLGI
CHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
KIEQFKHKKWFPVSERHMQSAQKIYHQYGFYSLLLSWVPIIGDPITLIAGVLKENFYRFI
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
LMVTLAKAGRYVCIYLLYLGFF
HHHHHHHCCHHHHHHHHHHHCC
>Mature Secondary Structure
MMSYLALFISAFGAATLLPLQSEAVLFSLLALKQQSALFLLLVATIGNVLGSCVNWWLGI
CHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
KIEQFKHKKWFPVSERHMQSAQKIYHQYGFYSLLLSWVPIIGDPITLIAGVLKENFYRFI
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
LMVTLAKAGRYVCIYLLYLGFF
HHHHHHHCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]