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The map label for this gene is oruR [H]

Identifier: 50086007

GI number: 50086007

Start: 2917210

End: 2918256

Strand: Direct

Name: oruR [H]

Synonym: ACIAD2986

Alternate gene names: 50086007

Gene position: 2917210-2918256 (Clockwise)

Preceding gene: 50086001

Following gene: 50086009

Centisome position: 81.06

GC content: 43.74

Gene sequence:

>1047_bases
CTGCAAGTGAACATAAAAGAGACTGACGGATTAAACGTAAACCGCGATACGATTAGTATTCATTTCGTCAACGCGGCTTT
AACTGGCGTCAAACGCCTTGGAATGGATGTCGAAACCTTACTGTCTCATGTTGGAATTGAGGCAGAACTACTACGTCAAC
CTAAAGCTCGTATTTCACCAGAACAATATACTCGTTTTATTAAAATGCTGTGGATGGTGACTCAGGATGAGCACGTCGGC
TTTGACATACAGCCACGTCGCCTGGGTACATTTGCCATTATGTGCCAATTAATTATTCATGCCAAAACACTTGGACAAGC
ATTAGAACTGTCTTCACAATTTTACAAGCTGTTTGGTGATGAGTGGTCTGTGACCTTAGAACGTGACAAGCATGAAGCTC
GTTTGGTCCCACTTATTCCTAAAACACTTGATCCAGATCACTTTATTACAGAAAGCATGCTCATGATCTGGCATGGATTG
GCGTCATGGCTGATTGAACGTCGCTTGCCTCTGGAACGTGTACACTTTAGTTACCCACGTCCTGCACATGCAGATGAGTA
TGATGCTTTATTTTTTGCACCCGTTATGCAATTTGATGCACCACGTACCGAGATCACGTTCGCTGCGGATTATTTAGATC
TGCCTCTTCGCCAGGATGAACAGACACTAGAAGAATTTTTAAAGGCCGCACCTGCACAGTTATTAATCAAATTTAAAAAT
ACCAACTCGCTGACCTCACGTATTCGTGAAGTTTTAAAAAGCCAGATTGGTGAAGAAATGCCGACCCTCAATGATGTTGC
ATCTATGCTGTATCTGTCACCACAAACGCTACGTCGTCGCCTTGCTGCCGAAGGCAAGAGCTATCAAGGCGTTAAAGATG
CATTACGTCGTGATGCCGCAATTCACCTGTTGCTCAACCCAGATTTGACGCTTGAAGATGTTGCACAGCAGGTCGGCTTT
AGTGAAACCAGTACTTTCCATCGTGCATTTAAAAAATGGACTGGCGTCACACCGGGTTTATATCGTCAATTACACGGTTA
TCATTAA

Upstream 100 bases:

>100_bases
AGCCATTTACCTTGATCATTTCGGCAATTTAACATAAACAAAATGATTTACATCTGTTGTAAATCGCCAATCGAATATTA
TTTAAAGTCATTTAGGCCAA

Downstream 100 bases:

>100_bases
ATTTTACGAATTTAGAGTCTGGTTAAAACCCAGACTTTTTTATTGGTATTTTCAAAGACTGTCTAAAAATACTTTTGCCT
GTTTCGGTGAAGTTAGACGA

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 348; Mature: 348

Protein sequence:

>348_residues
MQVNIKETDGLNVNRDTISIHFVNAALTGVKRLGMDVETLLSHVGIEAELLRQPKARISPEQYTRFIKMLWMVTQDEHVG
FDIQPRRLGTFAIMCQLIIHAKTLGQALELSSQFYKLFGDEWSVTLERDKHEARLVPLIPKTLDPDHFITESMLMIWHGL
ASWLIERRLPLERVHFSYPRPAHADEYDALFFAPVMQFDAPRTEITFAADYLDLPLRQDEQTLEEFLKAAPAQLLIKFKN
TNSLTSRIREVLKSQIGEEMPTLNDVASMLYLSPQTLRRRLAAEGKSYQGVKDALRRDAAIHLLLNPDLTLEDVAQQVGF
SETSTFHRAFKKWTGVTPGLYRQLHGYH

Sequences:

>Translated_348_residues
MQVNIKETDGLNVNRDTISIHFVNAALTGVKRLGMDVETLLSHVGIEAELLRQPKARISPEQYTRFIKMLWMVTQDEHVG
FDIQPRRLGTFAIMCQLIIHAKTLGQALELSSQFYKLFGDEWSVTLERDKHEARLVPLIPKTLDPDHFITESMLMIWHGL
ASWLIERRLPLERVHFSYPRPAHADEYDALFFAPVMQFDAPRTEITFAADYLDLPLRQDEQTLEEFLKAAPAQLLIKFKN
TNSLTSRIREVLKSQIGEEMPTLNDVASMLYLSPQTLRRRLAAEGKSYQGVKDALRRDAAIHLLLNPDLTLEDVAQQVGF
SETSTFHRAFKKWTGVTPGLYRQLHGYH
>Mature_348_residues
MQVNIKETDGLNVNRDTISIHFVNAALTGVKRLGMDVETLLSHVGIEAELLRQPKARISPEQYTRFIKMLWMVTQDEHVG
FDIQPRRLGTFAIMCQLIIHAKTLGQALELSSQFYKLFGDEWSVTLERDKHEARLVPLIPKTLDPDHFITESMLMIWHGL
ASWLIERRLPLERVHFSYPRPAHADEYDALFFAPVMQFDAPRTEITFAADYLDLPLRQDEQTLEEFLKAAPAQLLIKFKN
TNSLTSRIREVLKSQIGEEMPTLNDVASMLYLSPQTLRRRLAAEGKSYQGVKDALRRDAAIHLLLNPDLTLEDVAQQVGF
SETSTFHRAFKKWTGVTPGLYRQLHGYH

Specific function: Probably activates the ArgJ gene that encodes ornithine acetyltransferase. Binds to its own promoter-operator region. Probably binds ornithine [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR020449
- InterPro:   IPR018060 [H]

Pfam domain/function: PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 39966; Mature: 39966

Theoretical pI: Translated: 6.86; Mature: 6.86

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQVNIKETDGLNVNRDTISIHFVNAALTGVKRLGMDVETLLSHVGIEAELLRQPKARISP
CEEECCCCCCCCCCCCEEEEEEHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHCCHHCCCH
EQYTRFIKMLWMVTQDEHVGFDIQPRRLGTFAIMCQLIIHAKTLGQALELSSQFYKLFGD
HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
EWSVTLERDKHEARLVPLIPKTLDPDHFITESMLMIWHGLASWLIERRLPLERVHFSYPR
CEEEEEECCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCC
PAHADEYDALFFAPVMQFDAPRTEITFAADYLDLPLRQDEQTLEEFLKAAPAQLLIKFKN
CCCCCCCCHHHHHHHHHCCCCCCEEEEEHHHHCCCCCCCHHHHHHHHHHCCHHEEEEECC
TNSLTSRIREVLKSQIGEEMPTLNDVASMLYLSPQTLRRRLAAEGKSYQGVKDALRRDAA
CHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHCCCE
IHLLLNPDLTLEDVAQQVGFSETSTFHRAFKKWTGVTPGLYRQLHGYH
EEEEECCCCCHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCC
>Mature Secondary Structure
MQVNIKETDGLNVNRDTISIHFVNAALTGVKRLGMDVETLLSHVGIEAELLRQPKARISP
CEEECCCCCCCCCCCCEEEEEEHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHCCHHCCCH
EQYTRFIKMLWMVTQDEHVGFDIQPRRLGTFAIMCQLIIHAKTLGQALELSSQFYKLFGD
HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
EWSVTLERDKHEARLVPLIPKTLDPDHFITESMLMIWHGLASWLIERRLPLERVHFSYPR
CEEEEEECCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCC
PAHADEYDALFFAPVMQFDAPRTEITFAADYLDLPLRQDEQTLEEFLKAAPAQLLIKFKN
CCCCCCCCHHHHHHHHHCCCCCCEEEEEHHHHCCCCCCCHHHHHHHHHHCCHHEEEEECC
TNSLTSRIREVLKSQIGEEMPTLNDVASMLYLSPQTLRRRLAAEGKSYQGVKDALRRDAA
CHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHCCCE
IHLLLNPDLTLEDVAQQVGFSETSTFHRAFKKWTGVTPGLYRQLHGYH
EEEEECCCCCHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9401045; 10984043 [H]