| Definition | Acinetobacter sp. ADP1 chromosome, complete genome. |
|---|---|
| Accession | NC_005966 |
| Length | 3,598,621 |
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The map label for this gene is gcd [H]
Identifier: 50086004
GI number: 50086004
Start: 2911967
End: 2914372
Strand: Reverse
Name: gcd [H]
Synonym: ACIAD2983
Alternate gene names: 50086004
Gene position: 2914372-2911967 (Counterclockwise)
Preceding gene: 50086005
Following gene: 50086003
Centisome position: 80.99
GC content: 44.35
Gene sequence:
>2406_bases ATGTCTCAACCATCTTCAAATTCAGGACTTAGAACATTGACCGTAGTTATCGCTGCGGTGATTGGTCTATTCCTGCTCGT TGGAGGTATATGGCTTACTGTACTCGGTGGGTCATTCTATTATGTGATTGCAGGATTGGCATTACTGATCTTTGCATGGC TCTTGCTCAAACGATCAAGCACTTCTATCTGGTTGTATGCTGCATTAATGCTCGGTACAACGCTATGGGGTATTTGGGAA GTTGGTACAGACTTCTGGGCCTTGGCACCGCGTCTGGACATTTTAGGCGTACTTGGTCTATGGATTTTAATTCCAGCCGT GAGCCGTGGAATGGACAATGCAAAATCAAGCAAAATTGCGTTGTCTTCTACACTTGTGATTGCAATTGTGGTCATGGTTT ATTCTATTTTTAATGATCCGCAAGAAATTAATGGTGTCATTAAAAATGAGCAACCCAAAACTGCACAAGCAGTTGAAGGT GTTGATGCTGCTGATTGGCCTGCCTATGGTCGTACCCAGGGTGGTGTACGTTATTCGCCTTTAACGCAGATTAATGATCA GAACGTTAAAGATTTGAAAGTGGCATGGACCTTCCGTACAGGTGACTTAAAAACTGCAAATGACTCGGGTGAAACCACCA ATCAGGTTACGCCAATCAAAGTTGGCAATAACATGTACATGTGTACCACCCACCAATGGTTAATTGCACTTGACCCTGCA ACAGGTAAAGAAAAATGGCGTTTTGATCCGAAATTAAAAGCAGATAAAACCTATCAACATTTAACCTGTCGTGGTGTGAT GTATTACGATGCCAATAATACCAGTGAGTTCGCAACCAGCTTGCAAGCCAAAAAATCAGCATCGACAGAATGCCCACGTA AAGTCTTTTTACCTGTGAATGATGGTCGTCTGGTTGCTATCAATGCAGATACTGGTAAGGCATGCTCTGACTTTGGTACG AAGGGTGAAGTCGATTTACAAAAGTTGATGCCATATGCTTATCCAGGCGGTTATAACCCAACATCGCCAGGTATTGTTTC TGGTACAACAGTGGTGATTGCAGGTTCTGTCACAGATAACTACTCCAATAAAGAGCCATCAGGTGTCATTCGTGGTTACG ATGTAAACACGGGTAAACTGCTTTGGGCATTTGATACGGGTGCACAAGATCCAAATGCACTTCCTGGCGAAAATTCGACG TTTGTACACAATTCTCCAAATGCATGGGCGCCATTGGCATACGATCCGAAGCTGGATATCGTCTATGTACCAACAGGTGT CGGTACGCCAGATATCTGGGGTGGAGATCGTACCGAGTTGAAAGAGCGTTATGCAAATTCAATGCTGGCAATCAACGCCA CAACCGGTAAACTTGTTTGGCATTTCCAGACCACACATCATGATTTGTGGGATATGGATGTACCATCACAGCCTTCACTG GCAGATGTTAAAGACAAGTCTGGTCAGACTGTTCCAGCGATTTATGTGTTAACCAAAACAGGCAATGTTTTTGTTCTAGA TCGTCGTAATGGTAAGGCGATTGTGCCAATTACAGAAAAAGCGGTACCACAGACCGTGAAACGTGGCCCACAAACCAAGG GTGAACGTTATTCTGCGACACAACCATTTTCTGCACTTGATTTAGCACCAAAAGACAAACTTACAGACAAACAAATGTGG GGTGCCACAATGTTTGATCAGTTGATGTGTCGCGTGTCATTCAAGCGTCTGAACTATGACGGTATTTATACACCACCATC TGAAAACGGGACTTTAGTGTTCCCAGGAAATCTGGGTGTATTTGAATGGGGTGGGATGTCGGTCAATCAGGATCGTCAGA TTGCAGTCATGAATCCGTTGGCGCTACCGTTTGTGAGCCGTCTGATTCCGATGGATCCGAACCGTAAGGAAACTGCACGT GGTGCAGGAACAGAGCATGGTATTCAACCGATGTATGGTGTGCCTTATGGTGTGGAAATCAATGCATTCTTGTCGCCTCT TGGTTTGCCTTGTAAGCAGCCTGGCTGGGGCTATATTGCTGGTGTCGATTTAAATTCACATGAAGTGGTCTGGAAAAAAC GTATCGGTACTATCCGTGATAGTTTGCCAAATCTATTCCAGTTGCCAGCACTTAAAATTGGTGTACCTGGCTTGGGTGGA ACCATTTCAACTGCAGGTAACGTAATGTTTGTTGGTGCAACCCAGGATAACTATATCCGTGCGTTTAATGTTAGTAATGG TGAAAAACTGTGGGAAGCACGTTTACCAGCAGGTGGTCAAGCCACACCGATGACCTATGAAATCAATGGTAAACAATATG TGGTAATTATGGCGGGTGGTCATGGTTCATTTGGCACCAAGATGGGTGACTATCTTGTGGCTTATGCATTGCCGGATACC AAATAA
Upstream 100 bases:
>100_bases CTGTGATTCAACTGAGATAAAGTTGTTATACGAAGCATATCGCTCTCACTCATATACTTCGTATAACAGATTAAAAAAAC AAATTATTCGAGGTGGTCTC
Downstream 100 bases:
>100_bases TCATTGTTATTATTCACCATAAAAAAAGCCCAGATTGATTCTGGGCTTTTTAAAATAAATCTAAAAATTCTCTTATCAAT AAAACCGTTATTAAATATCC
Product: glucose dehydrogenase
Products: NA
Alternate protein names: GDH-A; Glucose dehydrogenase A [pyrroloquinoline-quinone]; Quinoprotein glucose DH [H]
Number of amino acids: Translated: 801; Mature: 800
Protein sequence:
>801_residues MSQPSSNSGLRTLTVVIAAVIGLFLLVGGIWLTVLGGSFYYVIAGLALLIFAWLLLKRSSTSIWLYAALMLGTTLWGIWE VGTDFWALAPRLDILGVLGLWILIPAVSRGMDNAKSSKIALSSTLVIAIVVMVYSIFNDPQEINGVIKNEQPKTAQAVEG VDAADWPAYGRTQGGVRYSPLTQINDQNVKDLKVAWTFRTGDLKTANDSGETTNQVTPIKVGNNMYMCTTHQWLIALDPA TGKEKWRFDPKLKADKTYQHLTCRGVMYYDANNTSEFATSLQAKKSASTECPRKVFLPVNDGRLVAINADTGKACSDFGT KGEVDLQKLMPYAYPGGYNPTSPGIVSGTTVVIAGSVTDNYSNKEPSGVIRGYDVNTGKLLWAFDTGAQDPNALPGENST FVHNSPNAWAPLAYDPKLDIVYVPTGVGTPDIWGGDRTELKERYANSMLAINATTGKLVWHFQTTHHDLWDMDVPSQPSL ADVKDKSGQTVPAIYVLTKTGNVFVLDRRNGKAIVPITEKAVPQTVKRGPQTKGERYSATQPFSALDLAPKDKLTDKQMW GATMFDQLMCRVSFKRLNYDGIYTPPSENGTLVFPGNLGVFEWGGMSVNQDRQIAVMNPLALPFVSRLIPMDPNRKETAR GAGTEHGIQPMYGVPYGVEINAFLSPLGLPCKQPGWGYIAGVDLNSHEVVWKKRIGTIRDSLPNLFQLPALKIGVPGLGG TISTAGNVMFVGATQDNYIRAFNVSNGEKLWEARLPAGGQATPMTYEINGKQYVVIMAGGHGSFGTKMGDYLVAYALPDT K
Sequences:
>Translated_801_residues MSQPSSNSGLRTLTVVIAAVIGLFLLVGGIWLTVLGGSFYYVIAGLALLIFAWLLLKRSSTSIWLYAALMLGTTLWGIWE VGTDFWALAPRLDILGVLGLWILIPAVSRGMDNAKSSKIALSSTLVIAIVVMVYSIFNDPQEINGVIKNEQPKTAQAVEG VDAADWPAYGRTQGGVRYSPLTQINDQNVKDLKVAWTFRTGDLKTANDSGETTNQVTPIKVGNNMYMCTTHQWLIALDPA TGKEKWRFDPKLKADKTYQHLTCRGVMYYDANNTSEFATSLQAKKSASTECPRKVFLPVNDGRLVAINADTGKACSDFGT KGEVDLQKLMPYAYPGGYNPTSPGIVSGTTVVIAGSVTDNYSNKEPSGVIRGYDVNTGKLLWAFDTGAQDPNALPGENST FVHNSPNAWAPLAYDPKLDIVYVPTGVGTPDIWGGDRTELKERYANSMLAINATTGKLVWHFQTTHHDLWDMDVPSQPSL ADVKDKSGQTVPAIYVLTKTGNVFVLDRRNGKAIVPITEKAVPQTVKRGPQTKGERYSATQPFSALDLAPKDKLTDKQMW GATMFDQLMCRVSFKRLNYDGIYTPPSENGTLVFPGNLGVFEWGGMSVNQDRQIAVMNPLALPFVSRLIPMDPNRKETAR GAGTEHGIQPMYGVPYGVEINAFLSPLGLPCKQPGWGYIAGVDLNSHEVVWKKRIGTIRDSLPNLFQLPALKIGVPGLGG TISTAGNVMFVGATQDNYIRAFNVSNGEKLWEARLPAGGQATPMTYEINGKQYVVIMAGGHGSFGTKMGDYLVAYALPDT K >Mature_800_residues SQPSSNSGLRTLTVVIAAVIGLFLLVGGIWLTVLGGSFYYVIAGLALLIFAWLLLKRSSTSIWLYAALMLGTTLWGIWEV GTDFWALAPRLDILGVLGLWILIPAVSRGMDNAKSSKIALSSTLVIAIVVMVYSIFNDPQEINGVIKNEQPKTAQAVEGV DAADWPAYGRTQGGVRYSPLTQINDQNVKDLKVAWTFRTGDLKTANDSGETTNQVTPIKVGNNMYMCTTHQWLIALDPAT GKEKWRFDPKLKADKTYQHLTCRGVMYYDANNTSEFATSLQAKKSASTECPRKVFLPVNDGRLVAINADTGKACSDFGTK GEVDLQKLMPYAYPGGYNPTSPGIVSGTTVVIAGSVTDNYSNKEPSGVIRGYDVNTGKLLWAFDTGAQDPNALPGENSTF VHNSPNAWAPLAYDPKLDIVYVPTGVGTPDIWGGDRTELKERYANSMLAINATTGKLVWHFQTTHHDLWDMDVPSQPSLA DVKDKSGQTVPAIYVLTKTGNVFVLDRRNGKAIVPITEKAVPQTVKRGPQTKGERYSATQPFSALDLAPKDKLTDKQMWG ATMFDQLMCRVSFKRLNYDGIYTPPSENGTLVFPGNLGVFEWGGMSVNQDRQIAVMNPLALPFVSRLIPMDPNRKETARG AGTEHGIQPMYGVPYGVEINAFLSPLGLPCKQPGWGYIAGVDLNSHEVVWKKRIGTIRDSLPNLFQLPALKIGVPGLGGT ISTAGNVMFVGATQDNYIRAFNVSNGEKLWEARLPAGGQATPMTYEINGKQYVVIMAGGHGSFGTKMGDYLVAYALPDTK
Specific function: Catalyzes an exceptionally high rate of oxidation of a wide range of aldose sugars, including D-glucose, galactose, arabinose and xylose, and also the disaccharides lactose, cellobiose and maltose [H]
COG id: COG4993
COG function: function code G; Glucose dehydrogenase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein; Periplasmic side [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial PQQ dehydrogenase family [H]
Homologues:
Organism=Escherichia coli, GI1786316, Length=796, Percent_Identity=59.9246231155779, Blast_Score=964, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017511 - InterPro: IPR019556 - InterPro: IPR019551 - InterPro: IPR018391 - InterPro: IPR002372 - InterPro: IPR011047 - InterPro: IPR001479 [H]
Pfam domain/function: PF01011 PQQ; PF10535 PQQ_C; PF10527 PQQ_N [H]
EC number: =1.1.99.35 [H]
Molecular weight: Translated: 87138; Mature: 87006
Theoretical pI: Translated: 8.60; Mature: 8.60
Prosite motif: PS00363 BACTERIAL_PQQ_1 ; PS00364 BACTERIAL_PQQ_2 ; PS00133 CARBOXYPEPT_ZN_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQPSSNSGLRTLTVVIAAVIGLFLLVGGIWLTVLGGSFYYVIAGLALLIFAWLLLKRSS CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCC TSIWLYAALMLGTTLWGIWEVGTDFWALAPRLDILGVLGLWILIPAVSRGMDNAKSSKIA CCCHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEE LSSTLVIAIVVMVYSIFNDPQEINGVIKNEQPKTAQAVEGVDAADWPAYGRTQGGVRYSP EHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCEEECC LTQINDQNVKDLKVAWTFRTGDLKTANDSGETTNQVTPIKVGNNMYMCTTHQWLIALDPA CCCCCCCCCCEEEEEEEEECCCCEECCCCCCCCCCEEEEEECCEEEEEEECCEEEEECCC TGKEKWRFDPKLKADKTYQHLTCRGVMYYDANNTSEFATSLQAKKSASTECPRKVFLPVN CCCCCEECCCCCCCCCCEEEEEEEEEEEECCCCHHHHHHHHHHHHCCCCCCCCEEEEEEC DGRLVAINADTGKACSDFGTKGEVDLQKLMPYAYPGGYNPTSPGIVSGTTVVIAGSVTDN CCEEEEEECCCCCHHHHCCCCCCCCHHHHCCCCCCCCCCCCCCCEECCCEEEEEECCCCC YSNKEPSGVIRGYDVNTGKLLWAFDTGAQDPNALPGENSTFVHNSPNAWAPLAYDPKLDI CCCCCCCCEEEEEECCCCEEEEEEECCCCCCCCCCCCCCEEEECCCCCCCCEEECCCEEE VYVPTGVGTPDIWGGDRTELKERYANSMLAINATTGKLVWHFQTTHHDLWDMDVPSQPSL EEEECCCCCCCCCCCCHHHHHHHHCCCEEEEEECCCEEEEEEECCCCCCCCCCCCCCCCC ADVKDKSGQTVPAIYVLTKTGNVFVLDRRNGKAIVPITEKAVPQTVKRGPQTKGERYSAT CCCCCCCCCEEEEEEEEEECCCEEEEECCCCCEEEEECHHHHHHHHHCCCCCCCCCCCCC QPFSALDLAPKDKLTDKQMWGATMFDQLMCRVSFKRLNYDGIYTPPSENGTLVFPGNLGV CCCHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCEEEECCCCCE FEWGGMSVNQDRQIAVMNPLALPFVSRLIPMDPNRKETARGAGTEHGIQPMYGVPYGVEI EECCCCCCCCCCEEEEECCHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCCCCCCEEH NAFLSPLGLPCKQPGWGYIAGVDLNSHEVVWKKRIGTIRDSLPNLFQLPALKIGVPGLGG HHHHCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCHHHHCCEEEECCCCCCC TISTAGNVMFVGATQDNYIRAFNVSNGEKLWEARLPAGGQATPMTYEINGKQYVVIMAGG CEECCCCEEEEECCCCCEEEEEECCCCHHHHHCCCCCCCCCCCEEEEECCCEEEEEEECC HGSFGTKMGDYLVAYALPDTK CCCCCCCCCCEEEEEECCCCC >Mature Secondary Structure SQPSSNSGLRTLTVVIAAVIGLFLLVGGIWLTVLGGSFYYVIAGLALLIFAWLLLKRSS CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCC TSIWLYAALMLGTTLWGIWEVGTDFWALAPRLDILGVLGLWILIPAVSRGMDNAKSSKIA CCCHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEE LSSTLVIAIVVMVYSIFNDPQEINGVIKNEQPKTAQAVEGVDAADWPAYGRTQGGVRYSP EHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCEEECC LTQINDQNVKDLKVAWTFRTGDLKTANDSGETTNQVTPIKVGNNMYMCTTHQWLIALDPA CCCCCCCCCCEEEEEEEEECCCCEECCCCCCCCCCEEEEEECCEEEEEEECCEEEEECCC TGKEKWRFDPKLKADKTYQHLTCRGVMYYDANNTSEFATSLQAKKSASTECPRKVFLPVN CCCCCEECCCCCCCCCCEEEEEEEEEEEECCCCHHHHHHHHHHHHCCCCCCCCEEEEEEC DGRLVAINADTGKACSDFGTKGEVDLQKLMPYAYPGGYNPTSPGIVSGTTVVIAGSVTDN CCEEEEEECCCCCHHHHCCCCCCCCHHHHCCCCCCCCCCCCCCCEECCCEEEEEECCCCC YSNKEPSGVIRGYDVNTGKLLWAFDTGAQDPNALPGENSTFVHNSPNAWAPLAYDPKLDI CCCCCCCCEEEEEECCCCEEEEEEECCCCCCCCCCCCCCEEEECCCCCCCCEEECCCEEE VYVPTGVGTPDIWGGDRTELKERYANSMLAINATTGKLVWHFQTTHHDLWDMDVPSQPSL EEEECCCCCCCCCCCCHHHHHHHHCCCEEEEEECCCEEEEEEECCCCCCCCCCCCCCCCC ADVKDKSGQTVPAIYVLTKTGNVFVLDRRNGKAIVPITEKAVPQTVKRGPQTKGERYSAT CCCCCCCCCEEEEEEEEEECCCEEEEECCCCCEEEEECHHHHHHHHHCCCCCCCCCCCCC QPFSALDLAPKDKLTDKQMWGATMFDQLMCRVSFKRLNYDGIYTPPSENGTLVFPGNLGV CCCHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCEEEECCCCCE FEWGGMSVNQDRQIAVMNPLALPFVSRLIPMDPNRKETARGAGTEHGIQPMYGVPYGVEI EECCCCCCCCCCEEEEECCHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCCCCCCEEH NAFLSPLGLPCKQPGWGYIAGVDLNSHEVVWKKRIGTIRDSLPNLFQLPALKIGVPGLGG HHHHCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCHHHHCCEEEECCCCCCC TISTAGNVMFVGATQDNYIRAFNVSNGEKLWEARLPAGGQATPMTYEINGKQYVVIMAGG CEECCCCEEEEECCCCCEEEEEECCCCHHHHHCCCCCCCCCCCEEEEECCCEEEEEEECC HGSFGTKMGDYLVAYALPDTK CCCCCCCCCCEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 3399393 [H]