| Definition | Acinetobacter sp. ADP1 chromosome, complete genome. |
|---|---|
| Accession | NC_005966 |
| Length | 3,598,621 |
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The map label for this gene is gyrA [H]
Identifier: 50085721
GI number: 50085721
Start: 2605946
End: 2608675
Strand: Reverse
Name: gyrA [H]
Synonym: ACIAD2652
Alternate gene names: 50085721
Gene position: 2608675-2605946 (Counterclockwise)
Preceding gene: 50085722
Following gene: 161349961
Centisome position: 72.49
GC content: 44.54
Gene sequence:
>2730_bases ATGAGCGTATCGGAAATCAGACCGATTGCCATTGAGGACGAACTCAAGCATTCATATCTAGATTATGCGATGAGCGTAAT TGTATCTCGTGCATTACCAGATGTAAGAGATGGCCTTAAGCCTGTGCACCGTCGTGTGCTTTATGCCATGCATGAGCTAG GCAATGACTATAACAAAGCCTATAAAAAATCGGCACGTGTCGTGGGTGATGTGATCGGTAAATATCACCCACATGGTGAT ACCGCTGTTTACGACACGATCGTGCGTATGGCGCAGGACTTCAGTCTGCGTTATCTATTGGTAGACGGTCAGGGCAACTT TGGTTCGGTCGATGGCGATAGTGCTGCGGCAATGCGTTATACCGAAGTTCGTATGACTAAGCTTACCCATGAGCTATTGG CTGATCTTGAAAAAGACACCGTAGACTGGGTAGATAACTACGATGGTTCAGAACGTATTCCTGATGTTCTTCCGACACGC ATTCCAAATTTGCTGATTAACGGCGCTGCTGGTATTGCAGTAGGTATGGCGACCAATATGGCGCCTCACCATCTCAATGA AGTGATTCATGCGTGCTTGGCTTATGCAGATAACCCAAATATTTCCATTGAAGGTTTGATGGAGCATATTACAGGGCCAG ATTTCCCGACAGGTGGCATCATCTATGGTAAATCAGGCATTGTGGATGCTTACCGTACGGGTAAAGGTCGTTTACATATC CGTGGCAAATATCATTTTGAAGAAGATGAAAAAACGGGTCGTACCACCATCGTATTTACCGAAATTCCATATCAGGTCAA TAAAGCACGCGTCATTGAACGTATTGCCGAGCTGGTTAAAGAGAAAAAACTGGAAGGAATTTCAGAGTTACGTGATGAGT CTGATAAAGACGGTATGCGTATTGCGATTGACTTGAAGCGTGGTGAAAACGCTGAGGTCATTGTGAATAACCTGTTCTTA AATACCCAGCTTGAAAACTCATTTAGTATCAATATGGTGTGTCTGGATAACGGACAGCCAAAATTGATGAATCTAAAAGA TATCATTGCTGCATTTATTCGCCATCGTCAAGAAGTGGTGACGCGTCGTACCATGTTCGAATTGCGTAAGGCACGTGAAC GTGGTCACATCTTGGAAGGTCTTACAGTAGCGCTTGCCAATATTGACGATATCATTGAGACGATCAAGACCTCGGCAAAC CCAGCAGAAGCGCGTGAGCGTTTACAAGCTGGTGAATGGGCTGGCGGTGGCGTTATTGCTCTGCTCGAAAAAGCGGGTTC TGTATCTGTGCGCCCAGACGAGATTGAAGGTGAAGATCCTGCGCGTCCATTTGGTCTGTCTGAGCAAGTGTATCGCTTAT CTCCTACTCAAGTGGCGGCAATTCTAGAACTTCGTTTACATCGTTTAACGGGTCTAGAGCAAGACAAGTTACATGCAGAA TACACCGAGATTTTAGGTCAAATTGCTGAATTAACAGCGATTTTGAATGATTTTAATCTGCTTATGGGTGTGATTCGTGA AGAATTGAGCTTAATTTTGCAACAGTATGGTGATGAGCGCCGTACACAGATTGTAGAATCACGTATCGATTTCTGTCGTG AAGATTTGATTCCAGAAGAGCAGGTGGTATTGACCGTTTCACAAACGGGTTATGCAAAAACGCAGCCATTGTCGGATTAC CAAGCGCAGCGCCGTGGTGGCCGTGGTAAATCTGCAACATCGATGAAAGATGACGATATTATTCAGCATCTGATTGTGGC ATCTAACCATGCAACCGTATTGTGCTTTACCAATGTAGGTAAAGTGTACCGTCTGAAAGTATTTGAAGTACCTCAAGCAT CTCGTGGCGCTAAAGGTCGTCCAATGGTGAATTTATTGCCACTGGATGCCAATGAATCAATTACTGCAATTTTACCTCTA ACTGAATTCCTAGAAAATCATTATGTCTTTATGGCAACAGCTTCTGGAACAGTTAAACGTGTAGAACTAGAGCAGTTTGC CAATATTCGTTCAAATGGTCTGCGCGCTATTGAACTTAACGAAGAAGATACCTTGATTGGTGTCGCAATTACCGATGGTC AACAGCAAATTATGCTGTTCTCTAATGAGGGTAAAGCGATTCGTTTTGCAGAAACTGATGTGCGTGCTATGGGGCGTACA GCGAAAGGTGTTCGTGGTATGCGCGTGACGCTGGCTGCTGCTGTGGATAGTGAAGACACAGAGTTGGATCATGATGAGTT GGACGATTCAGAAGAGTCCACCGATTCAAGTGTGGTGAGTCGTATTGTATCGTTAGTCGTTGTACCTGAAACTGGTGAGG TTTTATGTGCCAGTGCAAATGGTTACGGTAAACGTACTCCAGTAAATGACTTCCCAACCAAAAAACGTGGTGGTAAAGGC GTTATTGCAATTAAGACTTCCGAGCGTAATGGAGAGTTGGTTGGCGCAGTATCTATTGATGGAACTAAAGAGCTGATGCT GATTTCAGACGGCGGTACTTTAGTGCGTACCCGCGCGGCCGAAGTCGCAATGACGGGTCGTAATGCACAGGGTGTTCGCC TGATTCGTTTAAGTGATGCTGAAACCTTAGTTGGTGTTGTTTCGATTGAAGCGGTTGAAGATGATGAATTCATCGAAGTG GTAGAAGAAATTGCTACTGAATCTGAAATAACTGAAGTTGATCAGCCTGAAATAGATTCAGAATCAAGCGACTCAGCTGC TACTGAGTAA
Upstream 100 bases:
>100_bases CTGTATTTTTTATTTTTGGTTCAGTTTTTGAACTGAATTCTATTGCAAGATCAAGACATATTGCAGCAGGTTTTTCGCTT GCTGTATACAAGGAGTATGC
Downstream 100 bases:
>100_bases ATATTTTTCAAATAAAAAGGAAGCTTCGGCTTCCTTTTTTATTTTTGGTTTTTAGCTGAAGCAATAACGAGACGATAATA GGCGAGACTTAAAAAAATAG
Product: DNA gyrase, subunit A, type II topoisomerase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 909; Mature: 908
Protein sequence:
>909_residues MSVSEIRPIAIEDELKHSYLDYAMSVIVSRALPDVRDGLKPVHRRVLYAMHELGNDYNKAYKKSARVVGDVIGKYHPHGD TAVYDTIVRMAQDFSLRYLLVDGQGNFGSVDGDSAAAMRYTEVRMTKLTHELLADLEKDTVDWVDNYDGSERIPDVLPTR IPNLLINGAAGIAVGMATNMAPHHLNEVIHACLAYADNPNISIEGLMEHITGPDFPTGGIIYGKSGIVDAYRTGKGRLHI RGKYHFEEDEKTGRTTIVFTEIPYQVNKARVIERIAELVKEKKLEGISELRDESDKDGMRIAIDLKRGENAEVIVNNLFL NTQLENSFSINMVCLDNGQPKLMNLKDIIAAFIRHRQEVVTRRTMFELRKARERGHILEGLTVALANIDDIIETIKTSAN PAEARERLQAGEWAGGGVIALLEKAGSVSVRPDEIEGEDPARPFGLSEQVYRLSPTQVAAILELRLHRLTGLEQDKLHAE YTEILGQIAELTAILNDFNLLMGVIREELSLILQQYGDERRTQIVESRIDFCREDLIPEEQVVLTVSQTGYAKTQPLSDY QAQRRGGRGKSATSMKDDDIIQHLIVASNHATVLCFTNVGKVYRLKVFEVPQASRGAKGRPMVNLLPLDANESITAILPL TEFLENHYVFMATASGTVKRVELEQFANIRSNGLRAIELNEEDTLIGVAITDGQQQIMLFSNEGKAIRFAETDVRAMGRT AKGVRGMRVTLAAAVDSEDTELDHDELDDSEESTDSSVVSRIVSLVVVPETGEVLCASANGYGKRTPVNDFPTKKRGGKG VIAIKTSERNGELVGAVSIDGTKELMLISDGGTLVRTRAAEVAMTGRNAQGVRLIRLSDAETLVGVVSIEAVEDDEFIEV VEEIATESEITEVDQPEIDSESSDSAATE
Sequences:
>Translated_909_residues MSVSEIRPIAIEDELKHSYLDYAMSVIVSRALPDVRDGLKPVHRRVLYAMHELGNDYNKAYKKSARVVGDVIGKYHPHGD TAVYDTIVRMAQDFSLRYLLVDGQGNFGSVDGDSAAAMRYTEVRMTKLTHELLADLEKDTVDWVDNYDGSERIPDVLPTR IPNLLINGAAGIAVGMATNMAPHHLNEVIHACLAYADNPNISIEGLMEHITGPDFPTGGIIYGKSGIVDAYRTGKGRLHI RGKYHFEEDEKTGRTTIVFTEIPYQVNKARVIERIAELVKEKKLEGISELRDESDKDGMRIAIDLKRGENAEVIVNNLFL NTQLENSFSINMVCLDNGQPKLMNLKDIIAAFIRHRQEVVTRRTMFELRKARERGHILEGLTVALANIDDIIETIKTSAN PAEARERLQAGEWAGGGVIALLEKAGSVSVRPDEIEGEDPARPFGLSEQVYRLSPTQVAAILELRLHRLTGLEQDKLHAE YTEILGQIAELTAILNDFNLLMGVIREELSLILQQYGDERRTQIVESRIDFCREDLIPEEQVVLTVSQTGYAKTQPLSDY QAQRRGGRGKSATSMKDDDIIQHLIVASNHATVLCFTNVGKVYRLKVFEVPQASRGAKGRPMVNLLPLDANESITAILPL TEFLENHYVFMATASGTVKRVELEQFANIRSNGLRAIELNEEDTLIGVAITDGQQQIMLFSNEGKAIRFAETDVRAMGRT AKGVRGMRVTLAAAVDSEDTELDHDELDDSEESTDSSVVSRIVSLVVVPETGEVLCASANGYGKRTPVNDFPTKKRGGKG VIAIKTSERNGELVGAVSIDGTKELMLISDGGTLVRTRAAEVAMTGRNAQGVRLIRLSDAETLVGVVSIEAVEDDEFIEV VEEIATESEITEVDQPEIDSESSDSAATE >Mature_908_residues SVSEIRPIAIEDELKHSYLDYAMSVIVSRALPDVRDGLKPVHRRVLYAMHELGNDYNKAYKKSARVVGDVIGKYHPHGDT AVYDTIVRMAQDFSLRYLLVDGQGNFGSVDGDSAAAMRYTEVRMTKLTHELLADLEKDTVDWVDNYDGSERIPDVLPTRI PNLLINGAAGIAVGMATNMAPHHLNEVIHACLAYADNPNISIEGLMEHITGPDFPTGGIIYGKSGIVDAYRTGKGRLHIR GKYHFEEDEKTGRTTIVFTEIPYQVNKARVIERIAELVKEKKLEGISELRDESDKDGMRIAIDLKRGENAEVIVNNLFLN TQLENSFSINMVCLDNGQPKLMNLKDIIAAFIRHRQEVVTRRTMFELRKARERGHILEGLTVALANIDDIIETIKTSANP AEARERLQAGEWAGGGVIALLEKAGSVSVRPDEIEGEDPARPFGLSEQVYRLSPTQVAAILELRLHRLTGLEQDKLHAEY TEILGQIAELTAILNDFNLLMGVIREELSLILQQYGDERRTQIVESRIDFCREDLIPEEQVVLTVSQTGYAKTQPLSDYQ AQRRGGRGKSATSMKDDDIIQHLIVASNHATVLCFTNVGKVYRLKVFEVPQASRGAKGRPMVNLLPLDANESITAILPLT EFLENHYVFMATASGTVKRVELEQFANIRSNGLRAIELNEEDTLIGVAITDGQQQIMLFSNEGKAIRFAETDVRAMGRTA KGVRGMRVTLAAAVDSEDTELDHDELDDSEESTDSSVVSRIVSLVVVPETGEVLCASANGYGKRTPVNDFPTKKRGGKGV IAIKTSERNGELVGAVSIDGTKELMLISDGGTLVRTRAAEVAMTGRNAQGVRLIRLSDAETLVGVVSIEAVEDDEFIEVV EEIATESEITEVDQPEIDSESSDSAATE
Specific function: DNA gyrase negatively supercoils closed circular double- stranded DNA in an ATP-dependent manner and also catalyzes the interconversion of other topological isomers of double-stranded DNA rings, including catenanes and knotted rings [H]
COG id: COG0188
COG function: function code L; Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the topoisomerase gyrA/parC subunit family [H]
Homologues:
Organism=Homo sapiens, GI19913408, Length=344, Percent_Identity=26.1627906976744, Blast_Score=74, Evalue=5e-13, Organism=Escherichia coli, GI1788562, Length=895, Percent_Identity=60, Blast_Score=1079, Evalue=0.0, Organism=Escherichia coli, GI1789396, Length=740, Percent_Identity=34.3243243243243, Blast_Score=404, Evalue=1e-113, Organism=Caenorhabditis elegans, GI212645845, Length=373, Percent_Identity=25.201072386059, Blast_Score=77, Evalue=3e-14, Organism=Caenorhabditis elegans, GI17535065, Length=277, Percent_Identity=27.0758122743682, Blast_Score=76, Evalue=1e-13, Organism=Caenorhabditis elegans, GI212645657, Length=274, Percent_Identity=26.2773722627737, Blast_Score=73, Evalue=9e-13, Organism=Saccharomyces cerevisiae, GI6324241, Length=370, Percent_Identity=24.3243243243243, Blast_Score=72, Evalue=6e-13, Organism=Drosophila melanogaster, GI17136538, Length=167, Percent_Identity=32.9341317365269, Blast_Score=70, Evalue=9e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020899 - InterPro: IPR005743 - InterPro: IPR006691 - InterPro: IPR002205 - InterPro: IPR013758 - InterPro: IPR013757 - InterPro: IPR013760 [H]
Pfam domain/function: PF03989 DNA_gyraseA_C; PF00521 DNA_topoisoIV [H]
EC number: =5.99.1.3 [H]
Molecular weight: Translated: 100291; Mature: 100160
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVSEIRPIAIEDELKHSYLDYAMSVIVSRALPDVRDGLKPVHRRVLYAMHELGNDYNKA CCCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHH YKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQDFSLRYLLVDGQGNFGSVDGDSAAAMRY HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCHHHEEH TEVRMTKLTHELLADLEKDTVDWVDNYDGSERIPDVLPTRIPNLLINGAAGIAVGMATNM HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCHHEECCCCCEEEHHHCCC APHHLNEVIHACLAYADNPNISIEGLMEHITGPDFPTGGIIYGKSGIVDAYRTGKGRLHI CHHHHHHHHHHHHHHCCCCCEEHHHHHHHCCCCCCCCCCEEECCCCCEEHEECCCCEEEE RGKYHFEEDEKTGRTTIVFTEIPYQVNKARVIERIAELVKEKKLEGISELRDESDKDGMR EEEEEECCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCE IAIDLKRGENAEVIVNNLFLNTQLENSFSINMVCLDNGQPKLMNLKDIIAAFIRHRQEVV EEEEECCCCCCEEEEEEEEEEEEECCCEEEEEEEECCCCCCEECHHHHHHHHHHHHHHHH TRRTMFELRKARERGHILEGLTVALANIDDIIETIKTSANPAEARERLQAGEWAGGGVIA HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCEE LLEKAGSVSVRPDEIEGEDPARPFGLSEQVYRLSPTQVAAILELRLHRLTGLEQDKLHAE EEECCCCCCCCCCCCCCCCCCCCCCCCCHHEECCHHHHHHHHHHHHHHHCCCCHHHHHHH YTEILGQIAELTAILNDFNLLMGVIREELSLILQQYGDERRTQIVESRIDFCREDLIPEE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCC QVVLTVSQTGYAKTQPLSDYQAQRRGGRGKSATSMKDDDIIQHLIVASNHATVLCFTNVG EEEEEEECCCCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCC KVYRLKVFEVPQASRGAKGRPMVNLLPLDANESITAILPLTEFLENHYVFMATASGTVKR CEEEEEEEECCCCCCCCCCCCEEEEEECCCCCCEEEEECHHHHHCCCEEEEEECCCCEEE VELEQFANIRSNGLRAIELNEEDTLIGVAITDGQQQIMLFSNEGKAIRFAETDVRAMGRT EEHHHHHHHHHCCEEEEEECCCCCEEEEEEECCCEEEEEEECCCCEEEEECHHHHHHCCH AKGVRGMRVTLAAAVDSEDTELDHDELDDSEESTDSSVVSRIVSLVVVPETGEVLCASAN HCCCCCEEEEEEEEECCCCCCCCHHHCCCCCCCHHHHHHHHHHHEEEECCCCCEEEECCC GYGKRTPVNDFPTKKRGGKGVIAIKTSERNGELVGAVSIDGTKELMLISDGGTLVRTRAA CCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEEEEECCCCEEEEEECCCCEEEEEHH EVAMTGRNAQGVRLIRLSDAETLVGVVSIEAVEDDEFIEVVEEIATESEITEVDQPEIDS HEEEECCCCCCEEEEEECCCCCEEEEEEEEECCCHHHHHHHHHHHCCHHHHCCCCCCCCC ESSDSAATE CCCCCCCCC >Mature Secondary Structure SVSEIRPIAIEDELKHSYLDYAMSVIVSRALPDVRDGLKPVHRRVLYAMHELGNDYNKA CCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHH YKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQDFSLRYLLVDGQGNFGSVDGDSAAAMRY HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCHHHEEH TEVRMTKLTHELLADLEKDTVDWVDNYDGSERIPDVLPTRIPNLLINGAAGIAVGMATNM HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCHHEECCCCCEEEHHHCCC APHHLNEVIHACLAYADNPNISIEGLMEHITGPDFPTGGIIYGKSGIVDAYRTGKGRLHI CHHHHHHHHHHHHHHCCCCCEEHHHHHHHCCCCCCCCCCEEECCCCCEEHEECCCCEEEE RGKYHFEEDEKTGRTTIVFTEIPYQVNKARVIERIAELVKEKKLEGISELRDESDKDGMR EEEEEECCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCE IAIDLKRGENAEVIVNNLFLNTQLENSFSINMVCLDNGQPKLMNLKDIIAAFIRHRQEVV EEEEECCCCCCEEEEEEEEEEEEECCCEEEEEEEECCCCCCEECHHHHHHHHHHHHHHHH TRRTMFELRKARERGHILEGLTVALANIDDIIETIKTSANPAEARERLQAGEWAGGGVIA HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCEE LLEKAGSVSVRPDEIEGEDPARPFGLSEQVYRLSPTQVAAILELRLHRLTGLEQDKLHAE EEECCCCCCCCCCCCCCCCCCCCCCCCCHHEECCHHHHHHHHHHHHHHHCCCCHHHHHHH YTEILGQIAELTAILNDFNLLMGVIREELSLILQQYGDERRTQIVESRIDFCREDLIPEE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCC QVVLTVSQTGYAKTQPLSDYQAQRRGGRGKSATSMKDDDIIQHLIVASNHATVLCFTNVG EEEEEEECCCCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCC KVYRLKVFEVPQASRGAKGRPMVNLLPLDANESITAILPLTEFLENHYVFMATASGTVKR CEEEEEEEECCCCCCCCCCCCEEEEEECCCCCCEEEEECHHHHHCCCEEEEEECCCCEEE VELEQFANIRSNGLRAIELNEEDTLIGVAITDGQQQIMLFSNEGKAIRFAETDVRAMGRT EEHHHHHHHHHCCEEEEEECCCCCEEEEEEECCCEEEEEEECCCCEEEEECHHHHHHCCH AKGVRGMRVTLAAAVDSEDTELDHDELDDSEESTDSSVVSRIVSLVVVPETGEVLCASAN HCCCCCEEEEEEEEECCCCCCCCHHHCCCCCCCHHHHHHHHHHHEEEECCCCCEEEECCC GYGKRTPVNDFPTKKRGGKGVIAIKTSERNGELVGAVSIDGTKELMLISDGGTLVRTRAA CCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEEEEECCCCEEEEEECCCCEEEEEHH EVAMTGRNAQGVRLIRLSDAETLVGVVSIEAVEDDEFIEVVEEIATESEITEVDQPEIDS HEEEECCCCCCEEEEEECCCCCEEEEEEEEECCCHHHHHHHHHHHCCHHHHCCCCCCCCC ESSDSAATE CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11677609; 8849216 [H]