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The map label for this gene is pqqD

Identifier: 50085586

GI number: 50085586

Start: 2461875

End: 2462174

Strand: Direct

Name: pqqD

Synonym: ACIAD2506

Alternate gene names: 50085586

Gene position: 2461875-2462174 (Clockwise)

Preceding gene: 50085585

Following gene: 50085587

Centisome position: 68.41

GC content: 41.67

Gene sequence:

>300_bases
TTGGCATCAAAAAGGATTATTAGGATGAGTGACTTATTGCATACCACGCCAGTATTTAATCGCGGTTATCGTTTTCAATG
GGAACAAGCCCAGCAATCGTATGTGATTTTGTATCCTGAAGGTTTGGTACGTTTAAATGAAAGCGCAACGCTGATCTTAA
AACAGATCGATGGCAAGCTTACTGTGCATGACATCATTCAGAATTTAAGTGCGCAATTTCCAGATGCGACAGGACTCGAT
CAGGACATCGTAGAGTTTTTAAAACAGGCCGAATCTCGGCAGTGGATTTGCTTGCAATGA

Upstream 100 bases:

>100_bases
TACAGTTCAAACTGGATATTTTGTGGACGATCCTTGATGGTATGAGCATGGCCTATGTGCTTGAGCGTGCACCATATCAC
ACGGTTACTCAAGAAGCGGT

Downstream 100 bases:

>100_bases
ACATTCCTGTTTCACTCCAGAGCAAGCCACCACTCTGGCTACTGGCAGAACTGACCTATCGCTGTCCATTACAATGTGCT
TATTGTTCAAATCCTTTGGA

Product: pyrroloquinoline quinone biosynthesis protein PqqD

Products: NA

Alternate protein names: Pyrroloquinoline quinone biosynthesis protein D

Number of amino acids: Translated: 99; Mature: 98

Protein sequence:

>99_residues
MASKRIIRMSDLLHTTPVFNRGYRFQWEQAQQSYVILYPEGLVRLNESATLILKQIDGKLTVHDIIQNLSAQFPDATGLD
QDIVEFLKQAESRQWICLQ

Sequences:

>Translated_99_residues
MASKRIIRMSDLLHTTPVFNRGYRFQWEQAQQSYVILYPEGLVRLNESATLILKQIDGKLTVHDIIQNLSAQFPDATGLD
QDIVEFLKQAESRQWICLQ
>Mature_98_residues
ASKRIIRMSDLLHTTPVFNRGYRFQWEQAQQSYVILYPEGLVRLNESATLILKQIDGKLTVHDIIQNLSAQFPDATGLDQ
DIVEFLKQAESRQWICLQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pqqD family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PQQD_ACIAD (Q6F9J0)

Other databases:

- EMBL:   CR543861
- RefSeq:   YP_047096.1
- STRING:   Q6F9J0
- GeneID:   2879638
- GenomeReviews:   CR543861_GR
- KEGG:   aci:ACIAD2506
- NMPDR:   fig|62977.3.peg.2105
- eggNOG:   NOG148721
- HOGENOM:   HBG544526
- OMA:   QYEPAQK
- ProtClustDB:   PRK02079
- BioCyc:   ASP62977:ACIAD2506-MONOMER
- HAMAP:   MF_00655
- InterPro:   IPR008792
- InterPro:   IPR022479
- TIGRFAMs:   TIGR03859

Pfam domain/function: PF05402 PqqD

EC number: NA

Molecular weight: Translated: 11492; Mature: 11361

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASKRIIRMSDLLHTTPVFNRGYRFQWEQAQQSYVILYPEGLVRLNESATLILKQIDGKL
CCCCHHHHHHHHHHCCCCCCCCCCEEECCCCCCEEEECCCCEEEECCCCEEEEECCCCCE
TVHDIIQNLSAQFPDATGLDQDIVEFLKQAESRQWICLQ
EHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCEEECC
>Mature Secondary Structure 
ASKRIIRMSDLLHTTPVFNRGYRFQWEQAQQSYVILYPEGLVRLNESATLILKQIDGKL
CCCHHHHHHHHHHCCCCCCCCCCEEECCCCCCEEEECCCCEEEECCCCEEEEECCCCCE
TVHDIIQNLSAQFPDATGLDQDIVEFLKQAESRQWICLQ
EHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA