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The map label for this gene is pqqC

Identifier: 50085585

GI number: 50085585

Start: 2461135

End: 2461902

Strand: Direct

Name: pqqC

Synonym: ACIAD2505

Alternate gene names: 50085585

Gene position: 2461135-2461902 (Clockwise)

Preceding gene: 50085584

Following gene: 50085586

Centisome position: 68.39

GC content: 46.22

Gene sequence:

>768_bases
TTGAGGTTTAATATGACCACAACATTATTTTCTCCTGCGGAATTTGAACAAGCCCTGCGTGACAAAGGTCGCTACTATCA
TATTCATCATCCCTATCACATCATGATGAATGATGGGCATGCCACTAAGCAACAAATTCAGGGCTGGGTCGCCAACCGTT
TTTATTATCAGGTCAATATCCCTTTAAAAGATGCGGCCATCATGGCCAATTGCCCAGATCCTGCGACACGCCGTAAATGG
GTGCAACGTATTTTGGATCACGATGGTCAACATGACGACCATGGCGGAATTGAAGCATGGTTGCGTCTGGGTGAAGCCGT
TGGCCTAGACCGTGAGACTATTTTGTCACAAAAGATGGTTTTGCCCAGTGTACGTTTTGCGGTAGATGCCTATGTCAATT
TTGCCCGTCGTGCCTGCTGGCAAGAAGCTGCATGTAGTTCGCTTACCGAACTTTTTGCACCTGCCATCCATCAATCACGT
CTGGATACTTGGCCTACACATTACCCATGGATTGATGCAGAAGGTTACGCCTATTTTAGAGGACGCTTGAGTCAGGCCAA
TCGTGACGTTGAGCATGGTTTGGAACTGGCACTTGAGTACTGCAATACCGTAGATCGCCAGCAGCGTATGTTGAATATTT
TACAGTTCAAACTGGATATTTTGTGGACGATCCTTGATGGTATGAGCATGGCCTATGTGCTTGAGCGTGCACCATATCAC
ACGGTTACTCAAGAAGCGGTTTGGCATCAAAAAGGATTATTAGGATGA

Upstream 100 bases:

>100_bases
ATTCATATCAACAATACCAATCCGATCTTAAACGAAGATTCTGTCGAACGTGCCACACTCAAGCAGCTTGAGATTGAGGT
GAGTTATGATGGTATGCTGA

Downstream 100 bases:

>100_bases
GTGACTTATTGCATACCACGCCAGTATTTAATCGCGGTTATCGTTTTCAATGGGAACAAGCCCAGCAATCGTATGTGATT
TTGTATCCTGAAGGTTTGGT

Product: pyrroloquinoline quinone biosynthesis protein PqqC

Products: NA

Alternate protein names: Coenzyme PQQ synthesis protein C; Pyrroloquinoline quinone biosynthesis protein C

Number of amino acids: Translated: 255; Mature: 255

Protein sequence:

>255_residues
MRFNMTTTLFSPAEFEQALRDKGRYYHIHHPYHIMMNDGHATKQQIQGWVANRFYYQVNIPLKDAAIMANCPDPATRRKW
VQRILDHDGQHDDHGGIEAWLRLGEAVGLDRETILSQKMVLPSVRFAVDAYVNFARRACWQEAACSSLTELFAPAIHQSR
LDTWPTHYPWIDAEGYAYFRGRLSQANRDVEHGLELALEYCNTVDRQQRMLNILQFKLDILWTILDGMSMAYVLERAPYH
TVTQEAVWHQKGLLG

Sequences:

>Translated_255_residues
MRFNMTTTLFSPAEFEQALRDKGRYYHIHHPYHIMMNDGHATKQQIQGWVANRFYYQVNIPLKDAAIMANCPDPATRRKW
VQRILDHDGQHDDHGGIEAWLRLGEAVGLDRETILSQKMVLPSVRFAVDAYVNFARRACWQEAACSSLTELFAPAIHQSR
LDTWPTHYPWIDAEGYAYFRGRLSQANRDVEHGLELALEYCNTVDRQQRMLNILQFKLDILWTILDGMSMAYVLERAPYH
TVTQEAVWHQKGLLG
>Mature_255_residues
MRFNMTTTLFSPAEFEQALRDKGRYYHIHHPYHIMMNDGHATKQQIQGWVANRFYYQVNIPLKDAAIMANCPDPATRRKW
VQRILDHDGQHDDHGGIEAWLRLGEAVGLDRETILSQKMVLPSVRFAVDAYVNFARRACWQEAACSSLTELFAPAIHQSR
LDTWPTHYPWIDAEGYAYFRGRLSQANRDVEHGLELALEYCNTVDRQQRMLNILQFKLDILWTILDGMSMAYVLERAPYH
TVTQEAVWHQKGLLG

Specific function: Ring cyclization and eight-electron oxidation of 3a-(2- amino-2-carboxyethyl)-4,5-dioxo-4,5,6,7,8,9-hexahydroquinoline- 7,9-dicarboxylic-acid to PQQ

COG id: COG5424

COG function: function code H; Pyrroloquinoline quinone (Coenzyme PQQ) biosynthesis protein C

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pqqC family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PQQC_ACIAD (Q6F9J1)

Other databases:

- EMBL:   CR543861
- RefSeq:   YP_047095.1
- ProteinModelPortal:   Q6F9J1
- SMR:   Q6F9J1
- STRING:   Q6F9J1
- GeneID:   2879637
- GenomeReviews:   CR543861_GR
- KEGG:   aci:ACIAD2505
- NMPDR:   fig|62977.3.peg.2104
- eggNOG:   COG5424
- HOGENOM:   HBG288944
- OMA:   DSWPQHY
- ProtClustDB:   PRK05157
- BioCyc:   ASP62977:ACIAD2505-MONOMER
- HAMAP:   MF_00654
- InterPro:   IPR016084
- InterPro:   IPR011845
- InterPro:   IPR004305
- Gene3D:   G3DSA:1.20.910.10
- TIGRFAMs:   TIGR02111

Pfam domain/function: PF03070 TENA_THI-4; SSF48613 Heme_oxygenase

EC number: =1.3.3.11

Molecular weight: Translated: 29662; Mature: 29662

Theoretical pI: Translated: 7.00; Mature: 7.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFNMTTTLFSPAEFEQALRDKGRYYHIHHPYHIMMNDGHATKQQIQGWVANRFYYQVNI
CCCCCCHHCCCHHHHHHHHHCCCCEEEEECCEEEEECCCCHHHHHHHHHHHHEEEEEEEC
PLKDAAIMANCPDPATRRKWVQRILDHDGQHDDHGGIEAWLRLGEAVGLDRETILSQKMV
CCCCCEEEECCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHH
LPSVRFAVDAYVNFARRACWQEAACSSLTELFAPAIHQSRLDTWPTHYPWIDAEGYAYFR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHH
GRLSQANRDVEHGLELALEYCNTVDRQQRMLNILQFKLDILWTILDGMSMAYVLERAPYH
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
TVTQEAVWHQKGLLG
HHHHHHHHHHCCCCC
>Mature Secondary Structure
MRFNMTTTLFSPAEFEQALRDKGRYYHIHHPYHIMMNDGHATKQQIQGWVANRFYYQVNI
CCCCCCHHCCCHHHHHHHHHCCCCEEEEECCEEEEECCCCHHHHHHHHHHHHEEEEEEEC
PLKDAAIMANCPDPATRRKWVQRILDHDGQHDDHGGIEAWLRLGEAVGLDRETILSQKMV
CCCCCEEEECCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHH
LPSVRFAVDAYVNFARRACWQEAACSSLTELFAPAIHQSRLDTWPTHYPWIDAEGYAYFR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHH
GRLSQANRDVEHGLELALEYCNTVDRQQRMLNILQFKLDILWTILDGMSMAYVLERAPYH
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
TVTQEAVWHQKGLLG
HHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA