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The map label for this gene is recR

Identifier: 50085407

GI number: 50085407

Start: 2278015

End: 2278611

Strand: Reverse

Name: recR

Synonym: ACIAD2312

Alternate gene names: 50085407

Gene position: 2278611-2278015 (Counterclockwise)

Preceding gene: 50085408

Following gene: 50085406

Centisome position: 63.32

GC content: 42.88

Gene sequence:

>597_bases
GTGTTTAGTGATCGATTTGAACAACTGGTTCAAGCACTACGTATCTTACCAAGCGTTGGGCCGAAATCGGCTCAACGCAT
GGCGTTACATTTACTCATGAAGAATCGAGAAGGTGCATTTGGCCTTGCGCATGCTCTGCATGAGGCATCTTCACATATTC
ATGAATGCAAGATTTGTCATTCACTGACTGAAAACGAAATTTGTGATATTTGTCTATCCAATGACCGAGATCAGCATTTG
TTATGTGTGGTGGAATCTCCAGCCGATGTCATGGCGATTGAACAAAGTGGTAGCTTTCGCGGTAAGTACCATGTTTTAGG
GGGACATTTATCTCCACTGGATGGAATAGGTCCCGAAGAAATCGGAATTCCTTATTTGATTCAGCGCTTAAGCTCTGGTG
AAATTGAAGAGGTTATTCTAGCGACTAATGCAACTGTAGAAGGACAAGCAACAGCACATTATTTGCTTGAAGCAACCAAA
CATCTTCCAGTACATATGACTCGTATTGCACAGGGTGTTCCACAGGGCGGCGAACTTGAGTATGTAGACAGTCATACCTT
GAGTCAGGCTGTACATAATCGTATGAAAATGAAATAG

Upstream 100 bases:

>100_bases
CGTCAGGCAGAAGCCGTGGCAGATGAAAAAATGAAAGGTGCCAATTCAGGTATGGGTTTGCCACCTGGCTTGTCAGGTTT
ATTTTAAGGATAAAGATAAC

Downstream 100 bases:

>100_bases
ACAATTTGGATTGTTTATTTCATTTTTACAAGTTACACCCATCAAAAAGAACAGATTAAATTTTCGATAAATATGCGAAA
TGATAAGTGATTAAAATTGA

Product: recombination protein RecR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 198; Mature: 198

Protein sequence:

>198_residues
MFSDRFEQLVQALRILPSVGPKSAQRMALHLLMKNREGAFGLAHALHEASSHIHECKICHSLTENEICDICLSNDRDQHL
LCVVESPADVMAIEQSGSFRGKYHVLGGHLSPLDGIGPEEIGIPYLIQRLSSGEIEEVILATNATVEGQATAHYLLEATK
HLPVHMTRIAQGVPQGGELEYVDSHTLSQAVHNRMKMK

Sequences:

>Translated_198_residues
MFSDRFEQLVQALRILPSVGPKSAQRMALHLLMKNREGAFGLAHALHEASSHIHECKICHSLTENEICDICLSNDRDQHL
LCVVESPADVMAIEQSGSFRGKYHVLGGHLSPLDGIGPEEIGIPYLIQRLSSGEIEEVILATNATVEGQATAHYLLEATK
HLPVHMTRIAQGVPQGGELEYVDSHTLSQAVHNRMKMK
>Mature_198_residues
MFSDRFEQLVQALRILPSVGPKSAQRMALHLLMKNREGAFGLAHALHEASSHIHECKICHSLTENEICDICLSNDRDQHL
LCVVESPADVMAIEQSGSFRGKYHVLGGHLSPLDGIGPEEIGIPYLIQRLSSGEIEEVILATNATVEGQATAHYLLEATK
HLPVHMTRIAQGVPQGGELEYVDSHTLSQAVHNRMKMK

Specific function: May play a role in DNA repair. It seems to be involved in an recBC-independent recombinational process of DNA repair. It may act with recF and recO

COG id: COG0353

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Toprim domain

Homologues:

Organism=Escherichia coli, GI1786678, Length=193, Percent_Identity=57.5129533678757, Blast_Score=213, Evalue=9e-57,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RECR_ACIAD (Q6FA18)

Other databases:

- EMBL:   CR543861
- RefSeq:   YP_046917.1
- ProteinModelPortal:   Q6FA18
- SMR:   Q6FA18
- STRING:   Q6FA18
- GeneID:   2880858
- GenomeReviews:   CR543861_GR
- KEGG:   aci:ACIAD2312
- NMPDR:   fig|62977.3.peg.2204
- eggNOG:   COG0353
- HOGENOM:   HBG571744
- OMA:   HGAISPM
- PhylomeDB:   Q6FA18
- ProtClustDB:   PRK00076
- BioCyc:   ASP62977:ACIAD2312-MONOMER
- HAMAP:   MF_00017
- InterPro:   IPR000093
- InterPro:   IPR006171
- InterPro:   IPR015967
- SMART:   SM00493
- TIGRFAMs:   TIGR00615

Pfam domain/function: PF02132 RecR; PF01751 Toprim; SSF111304 RecR

EC number: NA

Molecular weight: Translated: 21816; Mature: 21816

Theoretical pI: Translated: 6.38; Mature: 6.38

Prosite motif: PS01300 RECR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSDRFEQLVQALRILPSVGPKSAQRMALHLLMKNREGAFGLAHALHEASSHIHECKICH
CCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
SLTENEICDICLSNDRDQHLLCVVESPADVMAIEQSGSFRGKYHVLGGHLSPLDGIGPEE
HCCHHHHHHHHHCCCCCCEEEEEEECCCCEEEEECCCCCCCEEEEECCCCCCCCCCCCCC
IGIPYLIQRLSSGEIEEVILATNATVEGQATAHYLLEATKHLPVHMTRIAQGVPQGGELE
CCHHHHHHHHCCCCHHHEEEECCCCCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCCCCEE
YVDSHTLSQAVHNRMKMK
EEHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MFSDRFEQLVQALRILPSVGPKSAQRMALHLLMKNREGAFGLAHALHEASSHIHECKICH
CCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
SLTENEICDICLSNDRDQHLLCVVESPADVMAIEQSGSFRGKYHVLGGHLSPLDGIGPEE
HCCHHHHHHHHHCCCCCCEEEEEEECCCCEEEEECCCCCCCEEEEECCCCCCCCCCCCCC
IGIPYLIQRLSSGEIEEVILATNATVEGQATAHYLLEATKHLPVHMTRIAQGVPQGGELE
CCHHHHHHHHCCCCHHHEEEECCCCCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCCCCEE
YVDSHTLSQAVHNRMKMK
EEHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA