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The map label for this gene is adrA [H]

Identifier: 50085379

GI number: 50085379

Start: 2249118

End: 2250176

Strand: Reverse

Name: adrA [H]

Synonym: ACIAD2279

Alternate gene names: 50085379

Gene position: 2250176-2249118 (Counterclockwise)

Preceding gene: 50085381

Following gene: 50085375

Centisome position: 62.53

GC content: 36.36

Gene sequence:

>1059_bases
TTGATCATGCCATATATCAAAACGGAAGAAACCATTTTATTTACTCGGAGTAAGCGCTATGTTTTCCGTATATTTGTAAT
GCGGCAGATTGGGACTATTCTTTGTTTTTTTTCGATTTTTTCTGTTTTATATTACTTAAATTATCATGAGATTATATATG
TTTTATTGGCATTGAATGCATTTGTTTGGCCCATAGCTGCCTATCTCTATGCCAAAAATAAGAAAGATGGTGTAAGAACC
ACCAATATAAGTTTAATTGTTGATGCTGCTCTTGGAGGGATGTGGGTCGCAATTATGAAAATTAGTCCTTTACCATCGCT
CATTATGGTTGCAATTTTGGTTTCTGACCGTTTTGCTGCTGGAGGCTGGCAAATCCTTCGACCCTCATTGATTGCGATGT
TAGGTATTTTTTTAATTTTCTGGAGTTTTACTGGATTTCAAGTCAATCTTAGTTTTAATGAAATGATGGTGTGGTCATCG
CTACCGTTAGCTACCATTTACTTGATATCGTTAAGTATACTCACTCGTAAACTTGCAGTTCAGTTAATTCAAAAAAATCG
TGAATTTGAACGTATTGCATTAATGGATCCAAGACTACATATTCCAAATAGACGGCTTTTTGAGCAGAGGCTGTCATCAA
TTTTTATGCAAACACAAAGAAATGCCAGCAGTGCACATTTGATTTTGCTTGATGTCGATCATTTTAAAAAGATTAATGAT
ACTTATGGACATGAGGCTGGTGATTACTTTCTGGCTGAGATGTCAAGTATTTTGCGTGAATTGATCGGGCCGAAAGATAC
ACCTGCACGTTTTGGGGGAGATGAATTGGCTATTATTGTAGTTGACCAATCAAATGAAGAAATTATTTTATTGGCACGGA
GAATTAAAAACTCGATTCAACAAATTCGTCTTCAAAGTGATCCTGAGTTTTCTACTACGGTAAGTATTGGAATCGCTTCT
GCTGAGACCGTTGATACAGTCTCAGCATGGTTTGCTTTAGCAGATAAAGCCTTATACCAAGTCAAACGCAACGGTCGAAA
TGGATTTCACCTGTATTAA

Upstream 100 bases:

>100_bases
ATATAAAATTAAAATTCACGGTAAAATGAGATGGTTAAGAGGCGAAGGAAAGCAATTTTAGAGCAACTTAGCAGACCCTA
CACATAGTCTTATAAAGCAG

Downstream 100 bases:

>100_bases
TTATAGATTATTTTGTTGATATTCCTGAATAACTTCAAGTGCTGCACGAAAAGCCTCTTGCGCAGCTGGAGCACCACAAT
AAGGTAAACTATGAAGAAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 352; Mature: 352

Protein sequence:

>352_residues
MIMPYIKTEETILFTRSKRYVFRIFVMRQIGTILCFFSIFSVLYYLNYHEIIYVLLALNAFVWPIAAYLYAKNKKDGVRT
TNISLIVDAALGGMWVAIMKISPLPSLIMVAILVSDRFAAGGWQILRPSLIAMLGIFLIFWSFTGFQVNLSFNEMMVWSS
LPLATIYLISLSILTRKLAVQLIQKNREFERIALMDPRLHIPNRRLFEQRLSSIFMQTQRNASSAHLILLDVDHFKKIND
TYGHEAGDYFLAEMSSILRELIGPKDTPARFGGDELAIIVVDQSNEEIILLARRIKNSIQQIRLQSDPEFSTTVSIGIAS
AETVDTVSAWFALADKALYQVKRNGRNGFHLY

Sequences:

>Translated_352_residues
MIMPYIKTEETILFTRSKRYVFRIFVMRQIGTILCFFSIFSVLYYLNYHEIIYVLLALNAFVWPIAAYLYAKNKKDGVRT
TNISLIVDAALGGMWVAIMKISPLPSLIMVAILVSDRFAAGGWQILRPSLIAMLGIFLIFWSFTGFQVNLSFNEMMVWSS
LPLATIYLISLSILTRKLAVQLIQKNREFERIALMDPRLHIPNRRLFEQRLSSIFMQTQRNASSAHLILLDVDHFKKIND
TYGHEAGDYFLAEMSSILRELIGPKDTPARFGGDELAIIVVDQSNEEIILLARRIKNSIQQIRLQSDPEFSTTVSIGIAS
AETVDTVSAWFALADKALYQVKRNGRNGFHLY
>Mature_352_residues
MIMPYIKTEETILFTRSKRYVFRIFVMRQIGTILCFFSIFSVLYYLNYHEIIYVLLALNAFVWPIAAYLYAKNKKDGVRT
TNISLIVDAALGGMWVAIMKISPLPSLIMVAILVSDRFAAGGWQILRPSLIAMLGIFLIFWSFTGFQVNLSFNEMMVWSS
LPLATIYLISLSILTRKLAVQLIQKNREFERIALMDPRLHIPNRRLFEQRLSSIFMQTQRNASSAHLILLDVDHFKKIND
TYGHEAGDYFLAEMSSILRELIGPKDTPARFGGDELAIIVVDQSNEEIILLARRIKNSIQQIRLQSDPEFSTTVSIGIAS
AETVDTVSAWFALADKALYQVKRNGRNGFHLY

Specific function: Unknown

COG id: COG2199

COG function: function code T; FOG: GGDEF domain

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 GGDEF domain [H]

Homologues:

Organism=Escherichia coli, GI1786584, Length=330, Percent_Identity=30.6060606060606, Blast_Score=171, Evalue=8e-44,
Organism=Escherichia coli, GI1787262, Length=244, Percent_Identity=31.9672131147541, Blast_Score=104, Evalue=1e-23,
Organism=Escherichia coli, GI145693134, Length=184, Percent_Identity=30.4347826086957, Blast_Score=87, Evalue=2e-18,
Organism=Escherichia coli, GI87081881, Length=161, Percent_Identity=32.9192546583851, Blast_Score=85, Evalue=6e-18,
Organism=Escherichia coli, GI1787802, Length=150, Percent_Identity=34.6666666666667, Blast_Score=85, Evalue=9e-18,
Organism=Escherichia coli, GI1788956, Length=169, Percent_Identity=33.7278106508876, Blast_Score=83, Evalue=2e-17,
Organism=Escherichia coli, GI1787056, Length=157, Percent_Identity=34.3949044585987, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI1787816, Length=156, Percent_Identity=32.6923076923077, Blast_Score=79, Evalue=5e-16,
Organism=Escherichia coli, GI87081974, Length=154, Percent_Identity=30.5194805194805, Blast_Score=78, Evalue=1e-15,
Organism=Escherichia coli, GI1788381, Length=169, Percent_Identity=30.7692307692308, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI87081977, Length=183, Percent_Identity=32.2404371584699, Blast_Score=75, Evalue=4e-15,
Organism=Escherichia coli, GI87082007, Length=147, Percent_Identity=31.2925170068027, Blast_Score=72, Evalue=7e-14,
Organism=Escherichia coli, GI1787541, Length=184, Percent_Identity=28.804347826087, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI1788085, Length=163, Percent_Identity=27.6073619631902, Blast_Score=69, Evalue=5e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001054
- InterPro:   IPR000160
- InterPro:   IPR007894 [H]

Pfam domain/function: PF00990 GGDEF; PF05230 MASE2 [H]

EC number: NA

Molecular weight: Translated: 40239; Mature: 40239

Theoretical pI: Translated: 9.74; Mature: 9.74

Prosite motif: PS50887 GGDEF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIMPYIKTEETILFTRSKRYVFRIFVMRQIGTILCFFSIFSVLYYLNYHEIIYVLLALNA
CCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FVWPIAAYLYAKNKKDGVRTTNISLIVDAALGGMWVAIMKISPLPSLIMVAILVSDRFAA
HHHHHHHHHHHCCCCCCCEEEEEEEEEECHHCHHEEEEEEECCCHHHHHHHHHHHCCCCC
GGWQILRPSLIAMLGIFLIFWSFTGFQVNLSFNEMMVWSSLPLATIYLISLSILTRKLAV
CCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHEEEECCCCHHHHHHHHHHHHHHHHHH
QLIQKNREFERIALMDPRLHIPNRRLFEQRLSSIFMQTQRNASSAHLILLDVDHFKKIND
HHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEEHHHHHHHHH
TYGHEAGDYFLAEMSSILRELIGPKDTPARFGGDELAIIVVDQSNEEIILLARRIKNSIQ
HCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCCEEEEHHHHHHHHH
QIRLQSDPEFSTTVSIGIASAETVDTVSAWFALADKALYQVKRNGRNGFHLY
HHCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MIMPYIKTEETILFTRSKRYVFRIFVMRQIGTILCFFSIFSVLYYLNYHEIIYVLLALNA
CCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FVWPIAAYLYAKNKKDGVRTTNISLIVDAALGGMWVAIMKISPLPSLIMVAILVSDRFAA
HHHHHHHHHHHCCCCCCCEEEEEEEEEECHHCHHEEEEEEECCCHHHHHHHHHHHCCCCC
GGWQILRPSLIAMLGIFLIFWSFTGFQVNLSFNEMMVWSSLPLATIYLISLSILTRKLAV
CCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHEEEECCCCHHHHHHHHHHHHHHHHHH
QLIQKNREFERIALMDPRLHIPNRRLFEQRLSSIFMQTQRNASSAHLILLDVDHFKKIND
HHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEEHHHHHHHHH
TYGHEAGDYFLAEMSSILRELIGPKDTPARFGGDELAIIVVDQSNEEIILLARRIKNSIQ
HCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCCEEEEHHHHHHHHH
QIRLQSDPEFSTTVSIGIASAETVDTVSAWFALADKALYQVKRNGRNGFHLY
HHCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]