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The map label for this gene is pcaC [H]

Identifier: 50085378

GI number: 50085378

Start: 2248728

End: 2249117

Strand: Direct

Name: pcaC [H]

Synonym: ACIAD2278

Alternate gene names: 50085378

Gene position: 2248728-2249117 (Clockwise)

Preceding gene: 50085377

Following gene: 50085380

Centisome position: 62.49

GC content: 41.28

Gene sequence:

>390_bases
ATGTCACAACAAGATTATGAAAACGGCTTAAAAGTTCGAACTGAGGTCATGGGTGAAAACTTTGTCAAACGTGCACAAGA
AAATACTGTTACCTTTACCCAACCTCTTCAAGAATGGATTAACGAACATGCCTGGGGCTCCACATGGCAACGTGATGGTG
TATTACCACGCAAATATCGCTCTTTAATTACACTTGCCATGTTAACGGCTCTCAAAGCACCGACTGAGCTCAAAGGCCAT
GTTCGAGGAGCTTTAAATAACGGCTGTACCATTGAAGAAATTCAGGAAACTCTTCTTCATAGTTTACCTTATTGTGGTGC
TCCAGCTGCGCAAGAGGCTTTTCGTGCAGCACTTGAAGTTATTCAGGAATATCAACAAAATAATCTATAA

Upstream 100 bases:

>100_bases
CCTTAGATAAATAATTGATTCATCTAGTAACATTAATATGATAAAAGCGTCTTGGGACGCTTTTATCATTTGAACACTAA
AATCAACTTAAGGGAAAAAA

Downstream 100 bases:

>100_bases
TTAATACAGGTGAAATCCATTTCGACCGTTGCGTTTGACTTGGTATAAGGCTTTATCTGCTAAAGCAAACCATGCTGAGA
CTGTATCAACGGTCTCAGCA

Product: 4-carboxymuconolactone decarboxylase

Products: NA

Alternate protein names: CMD [H]

Number of amino acids: Translated: 129; Mature: 128

Protein sequence:

>129_residues
MSQQDYENGLKVRTEVMGENFVKRAQENTVTFTQPLQEWINEHAWGSTWQRDGVLPRKYRSLITLAMLTALKAPTELKGH
VRGALNNGCTIEEIQETLLHSLPYCGAPAAQEAFRAALEVIQEYQQNNL

Sequences:

>Translated_129_residues
MSQQDYENGLKVRTEVMGENFVKRAQENTVTFTQPLQEWINEHAWGSTWQRDGVLPRKYRSLITLAMLTALKAPTELKGH
VRGALNNGCTIEEIQETLLHSLPYCGAPAAQEAFRAALEVIQEYQQNNL
>Mature_128_residues
SQQDYENGLKVRTEVMGENFVKRAQENTVTFTQPLQEWINEHAWGSTWQRDGVLPRKYRSLITLAMLTALKAPTELKGHV
RGALNNGCTIEEIQETLLHSLPYCGAPAAQEAFRAALEVIQEYQQNNL

Specific function: Unknown

COG id: COG0599

COG function: function code S; Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003779
- InterPro:   IPR012788 [H]

Pfam domain/function: PF02627 CMD [H]

EC number: =4.1.1.44 [H]

Molecular weight: Translated: 14646; Mature: 14515

Theoretical pI: Translated: 5.66; Mature: 5.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQQDYENGLKVRTEVMGENFVKRAQENTVTFTQPLQEWINEHAWGSTWQRDGVLPRKYR
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHH
SLITLAMLTALKAPTELKGHVRGALNNGCTIEEIQETLLHSLPYCGAPAAQEAFRAALEV
HHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
IQEYQQNNL
HHHHHHCCC
>Mature Secondary Structure 
SQQDYENGLKVRTEVMGENFVKRAQENTVTFTQPLQEWINEHAWGSTWQRDGVLPRKYR
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHH
SLITLAMLTALKAPTELKGHVRGALNNGCTIEEIQETLLHSLPYCGAPAAQEAFRAALEV
HHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
IQEYQQNNL
HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2298704 [H]