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The map label for this gene is soxC [H]

Identifier: 50085189

GI number: 50085189

Start: 2049469

End: 2050737

Strand: Direct

Name: soxC [H]

Synonym: ACIAD2065

Alternate gene names: 50085189

Gene position: 2049469-2050737 (Clockwise)

Preceding gene: 50085188

Following gene: 50085190

Centisome position: 56.95

GC content: 42.4

Gene sequence:

>1269_bases
CTGCTCGCCATGCATGGATCTAAGGAGAAAATGATGACATCTTATCAAACCATTATACAAAATCATCAGCCTCTCGCTCC
TGCCCGCTATACGGCAAAACGCATCATAAAAAATGATGCTGAAGCACTTCAAATTGCAACAGAACTGAGTCAAAGCTTTA
AAGAAAAAAGTATTCAGCGTGATGCTGAACGAGTTTTACCCTTTGATGAAATTGAAGCGTTTAGCCAGTCTGGACTTTGG
GCAATTACTGTACCTAAACGCTACGGTGGTGCAGAAGTTTCAAGTTTAACTTTAGCAAAAATTATTGCCTTGTTTAGTGG
TGTAGACGGATCTATAGGTCAGATTCCGCAAAACCATTTTTATGCCTTAGAAGTGCTACGCAATACGGGTACAGAACAAC
AAAAGCAACGTCTGTATCAGGAGGTATTATCAGGTTTGCGTTTAGGCAATGCACTTGCAGAATTCAAACCTAAAAATGCA
AGTTTGAAGCAAACCCAGATCAAGGCTATCGAAACAGGATATGTTATTAATGGCGAGAAATTTTACTGTACAGGCAGTTT
ATTTGCGCATCGCATCCCGACTTTAGTCATCGATGAAGAAGGTCGTGAATATTTAGCCTTTGTGAGAAGTGATAGCGAAG
GACTTAGCTTGATCGATAACTGGACAGGTTTTGGCCAACGAGTAACAGGCAGTGGAGGCGTTAAGTTCACTCAGGTATTC
GTTGCTGCCGAAGATGTCATTCCTTTTGACAGTGCATTTCAACACCCAACTTTGGTCGGACCATTTGCTCAACTTATGCA
TGCTGCAATAGAAGTTGGAATTGCTCGTGCTGCATTTGAAGAAGCCTTAAAACGTGTACATGCAGCACGGCCATGGATTG
ACTCAAATGTTGATGCAGCAGCTCAAGATCCACTGACAATCTATGAAATTGGCCGTGTAGCAGCAGACGTCCATGCCAGC
GAAGCCTTACTTAAACATGCTGCTTTAACTATCGATGAAGTTCGCCTAAATACAAATGTAGAAACGATTGCCAAGGCATC
TATAGCAGTCGCCAAAATACGTGCTCATAGTACAGAAACCGCACTTAAAGCATCATCAAAACTGATTGAACTGGCAGGAA
GTCGTGGCAGTCAAAGTGTAGATGGCCTAGACAGATTCTGGCGTAACGCACGAGTACATACGCTGCATGATGCAGCACGC
TGGAAATATTACTTTATTGGAAACTACGTATTAAACGATATATTTCCGCCACGAAGAGGGACATTGTAA

Upstream 100 bases:

>100_bases
CTTGATCAGCATTGGCGTAATGCACGCGTACATACTTTGCACGACCCTGTGCGCTGGAAAATACATGCCATTGGTAACTA
TTACCTGAACGGTACCTTAC

Downstream 100 bases:

>100_bases
TGACAGAAACCACACAAAAGCACATTTTACTCAATGCTTTTGATATGAATAGTGTGGGACATATCAATCATGGCCTTTGG
ACACATCCACGTGATGAATC

Product: acyl-CoA dehydrogenase

Products: NA

Alternate protein names: DBT sulfur dioxygenase [H]

Number of amino acids: Translated: 422; Mature: 422

Protein sequence:

>422_residues
MLAMHGSKEKMMTSYQTIIQNHQPLAPARYTAKRIIKNDAEALQIATELSQSFKEKSIQRDAERVLPFDEIEAFSQSGLW
AITVPKRYGGAEVSSLTLAKIIALFSGVDGSIGQIPQNHFYALEVLRNTGTEQQKQRLYQEVLSGLRLGNALAEFKPKNA
SLKQTQIKAIETGYVINGEKFYCTGSLFAHRIPTLVIDEEGREYLAFVRSDSEGLSLIDNWTGFGQRVTGSGGVKFTQVF
VAAEDVIPFDSAFQHPTLVGPFAQLMHAAIEVGIARAAFEEALKRVHAARPWIDSNVDAAAQDPLTIYEIGRVAADVHAS
EALLKHAALTIDEVRLNTNVETIAKASIAVAKIRAHSTETALKASSKLIELAGSRGSQSVDGLDRFWRNARVHTLHDAAR
WKYYFIGNYVLNDIFPPRRGTL

Sequences:

>Translated_422_residues
MLAMHGSKEKMMTSYQTIIQNHQPLAPARYTAKRIIKNDAEALQIATELSQSFKEKSIQRDAERVLPFDEIEAFSQSGLW
AITVPKRYGGAEVSSLTLAKIIALFSGVDGSIGQIPQNHFYALEVLRNTGTEQQKQRLYQEVLSGLRLGNALAEFKPKNA
SLKQTQIKAIETGYVINGEKFYCTGSLFAHRIPTLVIDEEGREYLAFVRSDSEGLSLIDNWTGFGQRVTGSGGVKFTQVF
VAAEDVIPFDSAFQHPTLVGPFAQLMHAAIEVGIARAAFEEALKRVHAARPWIDSNVDAAAQDPLTIYEIGRVAADVHAS
EALLKHAALTIDEVRLNTNVETIAKASIAVAKIRAHSTETALKASSKLIELAGSRGSQSVDGLDRFWRNARVHTLHDAAR
WKYYFIGNYVLNDIFPPRRGTL
>Mature_422_residues
MLAMHGSKEKMMTSYQTIIQNHQPLAPARYTAKRIIKNDAEALQIATELSQSFKEKSIQRDAERVLPFDEIEAFSQSGLW
AITVPKRYGGAEVSSLTLAKIIALFSGVDGSIGQIPQNHFYALEVLRNTGTEQQKQRLYQEVLSGLRLGNALAEFKPKNA
SLKQTQIKAIETGYVINGEKFYCTGSLFAHRIPTLVIDEEGREYLAFVRSDSEGLSLIDNWTGFGQRVTGSGGVKFTQVF
VAAEDVIPFDSAFQHPTLVGPFAQLMHAAIEVGIARAAFEEALKRVHAARPWIDSNVDAAAQDPLTIYEIGRVAADVHAS
EALLKHAALTIDEVRLNTNVETIAKASIAVAKIRAHSTETALKASSKLIELAGSRGSQSVDGLDRFWRNARVHTLHDAAR
WKYYFIGNYVLNDIFPPRRGTL

Specific function: Part of a pathway to remove covalently bound sulfur from dibenzothiophene (DBT) without breaking carbon-carbon bonds. Sulfur dioxygenase which converts DBT to DBT-sulfone (DBTO2 or DBT 5,5-dioxide) [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013107
- InterPro:   IPR006092
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF08028 Acyl-CoA_dh_2; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 46599; Mature: 46599

Theoretical pI: Translated: 8.40; Mature: 8.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAMHGSKEKMMTSYQTIIQNHQPLAPARYTAKRIIKNDAEALQIATELSQSFKEKSIQR
CCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
DAERVLPFDEIEAFSQSGLWAITVPKRYGGAEVSSLTLAKIIALFSGVDGSIGQIPQNHF
HHHHCCCHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHH
YALEVLRNTGTEQQKQRLYQEVLSGLRLGNALAEFKPKNASLKQTQIKAIETGYVINGEK
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHEEECCEEECCCE
FYCTGSLFAHRIPTLVIDEEGREYLAFVRSDSEGLSLIDNWTGFGQRVTGSGGVKFTQVF
EEEEHHHHHHHCCEEEECCCCCEEEEEEECCCCCCCHHHCCCCCCCEECCCCCCEEEEEE
VAAEDVIPFDSAFQHPTLVGPFAQLMHAAIEVGIARAAFEEALKRVHAARPWIDSNVDAA
EEHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
AQDPLTIYEIGRVAADVHASEALLKHAALTIDEVRLNTNVETIAKASIAVAKIRAHSTET
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHCCHHH
ALKASSKLIELAGSRGSQSVDGLDRFWRNARVHTLHDAARWKYYFIGNYVLNDIFPPRRG
HHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCEEEEEHHHHEEEEEECHHHHHCCCCCCCC
TL
CC
>Mature Secondary Structure
MLAMHGSKEKMMTSYQTIIQNHQPLAPARYTAKRIIKNDAEALQIATELSQSFKEKSIQR
CCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
DAERVLPFDEIEAFSQSGLWAITVPKRYGGAEVSSLTLAKIIALFSGVDGSIGQIPQNHF
HHHHCCCHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHH
YALEVLRNTGTEQQKQRLYQEVLSGLRLGNALAEFKPKNASLKQTQIKAIETGYVINGEK
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHEEECCEEECCCE
FYCTGSLFAHRIPTLVIDEEGREYLAFVRSDSEGLSLIDNWTGFGQRVTGSGGVKFTQVF
EEEEHHHHHHHCCEEEECCCCCEEEEEEECCCCCCCHHHCCCCCCCEECCCCCCEEEEEE
VAAEDVIPFDSAFQHPTLVGPFAQLMHAAIEVGIARAAFEEALKRVHAARPWIDSNVDAA
EEHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
AQDPLTIYEIGRVAADVHASEALLKHAALTIDEVRLNTNVETIAKASIAVAKIRAHSTET
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHCCHHH
ALKASSKLIELAGSRGSQSVDGLDRFWRNARVHTLHDAARWKYYFIGNYVLNDIFPPRRG
HHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCEEEEEHHHHEEEEEECHHHHHCCCCCCCC
TL
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7961424; 7574582 [H]