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The map label for this gene is soxC [H]

Identifier: 50085188

GI number: 50085188

Start: 2048256

End: 2049491

Strand: Direct

Name: soxC [H]

Synonym: ACIAD2064

Alternate gene names: 50085188

Gene position: 2048256-2049491 (Clockwise)

Preceding gene: 50085182

Following gene: 50085189

Centisome position: 56.92

GC content: 40.13

Gene sequence:

>1236_bases
TTGATATCTAATGTAGGTATCACTATGTCTGAATTAATTTTTTCTAGATCTAAAACCGCTCATCTTATCAAAAATGATCA
GCAAGCAATTAATGCGGCCTATCAGGTGGCAGATTTTGCATTAGAAGGTCGTAATGTCCGAGATCAACAAAGAATTTTAC
CATTTGAGGAAATTGAACAGTTTAGCCTAAAAGGTTTAGGTGGTATCCGTATTCCGAAACGTTACGGTGGTGCTTTTATT
TCCAATAAAACATTGGCTCAAGTATTCCGGATTTTAAATAAAGCCGATTCGAGTTTGGGACAAATTCCTCAAAATCAAAT
TAGTTTGCTTCACCTGATTGATCTCATGGGGACAGAATCTCAAAAGCAATTTATTTATAGTGAAATCTTATCAGGGAAAC
GTCTTGCCAACGGCGGACCAGAAAAAAATACCAAAGATTCTAAAACACTACAGACCACACTAACGCTTAGAAATGGCGAA
TATTATCTGGACGGTGAAAAGTTCTACTCAACAGGAAGTATTTTTGCGCATTGGCTTGCAATTAAAGCAATTCATCCTAA
AGGTCATGTGGTGTTGGTGGTGGTTGAGCATGATAGCTCGGGGATCGAAATCATCAATGACTGGAATGGTTTTGGGCAAC
GTACTACGGCAAGCGGGACCGTGAAGCTCAATCAAGTCAAAGTCGATCCAAATCTGATTTTTGATGAGCGAATTCTGTCA
CAGGTACCTACTTATCGAGGTGCCTATTCACAACTTTTACAAGTTGCTATTGATGTCGGTATTGCTGAAGCAGCATTTTC
AGATCTCATTTCAACTGTAAAAAAAGCACGGCCAATTATAGATGCACATGTCGAGAAAGCTTCTTTAGAACCATTTACCT
TACAAGAAACAGGCAAACTTAATGTTTTGTTAGACGCTGCAATTTTATTACTTGATGAAGCCGCCGATTATTTAGATGAG
TTAGACCAACTTCAACAGATCACTGAACAGCAGGCAGCCCAAGCTTCGATTTTAGTCGCTCATGCCAAAGTCTATGCCAA
TGATGCTGCGTTACAAATTTCTGAAAAATTGCTTGAACTTGGTGGTAGTCGCGCAAGCCTTAGCCAGTTCAATCTTGATC
AGCATTGGCGTAATGCACGCGTACATACTTTGCACGACCCTGTGCGCTGGAAAATACATGCCATTGGTAACTATTACCTG
AACGGTACCTTACCTGCTCGCCATGCATGGATCTAA

Upstream 100 bases:

>100_bases
TATAAAAATGATTAATTTAGATTAAAAAGAATTAAGTATTTTTCTTCATAACGTTCGCTTAATCGATAATTTAAGCTAAG
AATATAAATATTCTAAGGTA

Downstream 100 bases:

>100_bases
GGAGAAAATGATGACATCTTATCAAACCATTATACAAAATCATCAGCCTCTCGCTCCTGCCCGCTATACGGCAAAACGCA
TCATAAAAAATGATGCTGAA

Product: acyl-CoA dehydrogenase

Products: NA

Alternate protein names: DBT sulfur dioxygenase [H]

Number of amino acids: Translated: 411; Mature: 411

Protein sequence:

>411_residues
MISNVGITMSELIFSRSKTAHLIKNDQQAINAAYQVADFALEGRNVRDQQRILPFEEIEQFSLKGLGGIRIPKRYGGAFI
SNKTLAQVFRILNKADSSLGQIPQNQISLLHLIDLMGTESQKQFIYSEILSGKRLANGGPEKNTKDSKTLQTTLTLRNGE
YYLDGEKFYSTGSIFAHWLAIKAIHPKGHVVLVVVEHDSSGIEIINDWNGFGQRTTASGTVKLNQVKVDPNLIFDERILS
QVPTYRGAYSQLLQVAIDVGIAEAAFSDLISTVKKARPIIDAHVEKASLEPFTLQETGKLNVLLDAAILLLDEAADYLDE
LDQLQQITEQQAAQASILVAHAKVYANDAALQISEKLLELGGSRASLSQFNLDQHWRNARVHTLHDPVRWKIHAIGNYYL
NGTLPARHAWI

Sequences:

>Translated_411_residues
MISNVGITMSELIFSRSKTAHLIKNDQQAINAAYQVADFALEGRNVRDQQRILPFEEIEQFSLKGLGGIRIPKRYGGAFI
SNKTLAQVFRILNKADSSLGQIPQNQISLLHLIDLMGTESQKQFIYSEILSGKRLANGGPEKNTKDSKTLQTTLTLRNGE
YYLDGEKFYSTGSIFAHWLAIKAIHPKGHVVLVVVEHDSSGIEIINDWNGFGQRTTASGTVKLNQVKVDPNLIFDERILS
QVPTYRGAYSQLLQVAIDVGIAEAAFSDLISTVKKARPIIDAHVEKASLEPFTLQETGKLNVLLDAAILLLDEAADYLDE
LDQLQQITEQQAAQASILVAHAKVYANDAALQISEKLLELGGSRASLSQFNLDQHWRNARVHTLHDPVRWKIHAIGNYYL
NGTLPARHAWI
>Mature_411_residues
MISNVGITMSELIFSRSKTAHLIKNDQQAINAAYQVADFALEGRNVRDQQRILPFEEIEQFSLKGLGGIRIPKRYGGAFI
SNKTLAQVFRILNKADSSLGQIPQNQISLLHLIDLMGTESQKQFIYSEILSGKRLANGGPEKNTKDSKTLQTTLTLRNGE
YYLDGEKFYSTGSIFAHWLAIKAIHPKGHVVLVVVEHDSSGIEIINDWNGFGQRTTASGTVKLNQVKVDPNLIFDERILS
QVPTYRGAYSQLLQVAIDVGIAEAAFSDLISTVKKARPIIDAHVEKASLEPFTLQETGKLNVLLDAAILLLDEAADYLDE
LDQLQQITEQQAAQASILVAHAKVYANDAALQISEKLLELGGSRASLSQFNLDQHWRNARVHTLHDPVRWKIHAIGNYYL
NGTLPARHAWI

Specific function: Part of a pathway to remove covalently bound sulfur from dibenzothiophene (DBT) without breaking carbon-carbon bonds. Sulfur dioxygenase which converts DBT to DBT-sulfone (DBTO2 or DBT 5,5-dioxide) [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013107
- InterPro:   IPR006092
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF08028 Acyl-CoA_dh_2; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 45674; Mature: 45674

Theoretical pI: Translated: 7.02; Mature: 7.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISNVGITMSELIFSRSKTAHLIKNDQQAINAAYQVADFALEGRNVRDQQRILPFEEIEQ
CCCCCCCHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHCCCHHHHHH
FSLKGLGGIRIPKRYGGAFISNKTLAQVFRILNKADSSLGQIPQNQISLLHLIDLMGTES
HHHCCCCCCCCCHHHCCCEECCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCH
QKQFIYSEILSGKRLANGGPEKNTKDSKTLQTTLTLRNGEYYLDGEKFYSTGSIFAHWLA
HHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEEECCEEEECCHHHCCCHHHHHHHHH
IKAIHPKGHVVLVVVEHDSSGIEIINDWNGFGQRTTASGTVKLNQVKVDPNLIFDERILS
HEEECCCCCEEEEEEEECCCCCEEEECCCCCCCCCCCCCEEEEEEEEECCCEEHHHHHHH
QVPTYRGAYSQLLQVAIDVGIAEAAFSDLISTVKKARPIIDAHVEKASLEPFTLQETGKL
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCEEECCCCCE
NVLLDAAILLLDEAADYLDELDQLQQITEQQAAQASILVAHAKVYANDAALQISEKLLEL
EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHCCCHHHHHHHHHHHC
GGSRASLSQFNLDQHWRNARVHTLHDPVRWKIHAIGNYYLNGTLPARHAWI
CCCCCHHHHCCCHHHHCCCCEEEECCCCEEEEEEEEEEEECCCCCCCCCCC
>Mature Secondary Structure
MISNVGITMSELIFSRSKTAHLIKNDQQAINAAYQVADFALEGRNVRDQQRILPFEEIEQ
CCCCCCCHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHCCCHHHHHH
FSLKGLGGIRIPKRYGGAFISNKTLAQVFRILNKADSSLGQIPQNQISLLHLIDLMGTES
HHHCCCCCCCCCHHHCCCEECCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCH
QKQFIYSEILSGKRLANGGPEKNTKDSKTLQTTLTLRNGEYYLDGEKFYSTGSIFAHWLA
HHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEEECCEEEECCHHHCCCHHHHHHHHH
IKAIHPKGHVVLVVVEHDSSGIEIINDWNGFGQRTTASGTVKLNQVKVDPNLIFDERILS
HEEECCCCCEEEEEEEECCCCCEEEECCCCCCCCCCCCCEEEEEEEEECCCEEHHHHHHH
QVPTYRGAYSQLLQVAIDVGIAEAAFSDLISTVKKARPIIDAHVEKASLEPFTLQETGKL
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCEEECCCCCE
NVLLDAAILLLDEAADYLDELDQLQQITEQQAAQASILVAHAKVYANDAALQISEKLLEL
EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHCCCHHHHHHHHHHHC
GGSRASLSQFNLDQHWRNARVHTLHDPVRWKIHAIGNYYLNGTLPARHAWI
CCCCCHHHHCCCHHHHCCCCEEEECCCCEEEEEEEEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7961424; 7574582 [H]