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The map label for this gene is 50084984

Identifier: 50084984

GI number: 50084984

Start: 1845239

End: 1845898

Strand: Direct

Name: 50084984

Synonym: ACIAD1839

Alternate gene names: NA

Gene position: 1845239-1845898 (Clockwise)

Preceding gene: 50084983

Following gene: 50084985

Centisome position: 51.28

GC content: 36.52

Gene sequence:

>660_bases
TTGATACCTGTCTCGCTTACTGAAAGAAGCAAAAATCTAGATCGACTTATTCAAAAGGTCTCACATCTCGCTGAAACTGA
GGGGGATCATGATTCTATTATTTCAGGGCTTTCTTTTCATAACCGCATGAGTCCAACTGACAGTACACATTGTATTTACA
GCATGGGGCTTAGTCTTGTTTTACAAGGACAAAAAGAAGTCATTATCGGAGATAATGTTTATCAGTGTCATGAAGGTCAC
AGTATGTTGACCATGATGGATTTACCAGTGACATCACGGATTATTAATGCTTCTTCGCAAAAGCCTTTTTTGGCGGTTTT
ACTATTATTAGATATTCAAGTAGTGAATGAGCTTGTCGCAAATTTGCCTGTAGAGGCTAAAACGATTATTTCAAATGATT
CGCATGAATCCTTCTCAGTCGAATTCGTCGATATATCACTTATAGATGCTGTAATGAGACTGGTGAAAATGCTAGACGAA
CCCAAAATGATTCCTCATTTAGCTGATTTAGTTAAAAAAGAAATTATTATTAGGCTTTTAAATAGTTCACAAGGTATTTC
ATTTACGCCAACTGGTAAAGTCTGGTTCGGTAAATCAAAAGATTCATCAAATCGTGAATTGGCTAAAAAGCAATTTCGCA
CAACCCATCCGTATGGATGA

Upstream 100 bases:

>100_bases
TTGGGGGATTAGAACCATATTATTTTTAACTAAACAGTTATTTACTGCATTCAATCCCAATGATAAAAATTATTTTAGTT
ACTATGCGGATTTAAATATC

Downstream 100 bases:

>100_bases
GTTAGCAGAAAGAGTCTTTATGAGTCCATCAACTTTCCGACAGCATTTTCGTGAAGTAACAGGAATGAGTCCATTACAAT
ATCAAAAACAACTGCGTTTA

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator AraC Family; AraC-Like Transcriptional Regulator; Transcriptional Regulator; Transcription Regulator Protein; Transcriptional Regulator Arac Family; Transcriptional Regulator Protein; AraC Family Helix-Turn-Helix Transcriptional Regulator; Arac-Like Transcriptional Regulator; HTH-Type Transcriptional Activator RhaS; HTH-Type Transcriptional Regulator; Transcriptional Regulator N/C Terminus AraC Family Protein; Transcriptional Regulator AraC Family Protein; AraC Family Regulatory Helix-Turn-Helix Protein; ARAC-Type Regulatory Protein; Helix-Turn-Helix Protein; Transcription Regulator; AraC Protein; Transcriptional Regulator AraC Type; AraC Family Regulatory Protein; Transcriptional Regulator Transcription Regulator Protein; AraC Family Transcription Regulator Protein; AraC-Type Transcriptional Regulator Domain Protein; AraC-Type Transcriptional Regulator N-Terminus; Transcriptional Regulator N/C Terminus AraC Family; AraC-Type Regulatory Protein

Number of amino acids: Translated: 219; Mature: 219

Protein sequence:

>219_residues
MIPVSLTERSKNLDRLIQKVSHLAETEGDHDSIISGLSFHNRMSPTDSTHCIYSMGLSLVLQGQKEVIIGDNVYQCHEGH
SMLTMMDLPVTSRIINASSQKPFLAVLLLLDIQVVNELVANLPVEAKTIISNDSHESFSVEFVDISLIDAVMRLVKMLDE
PKMIPHLADLVKKEIIIRLLNSSQGISFTPTGKVWFGKSKDSSNRELAKKQFRTTHPYG

Sequences:

>Translated_219_residues
MIPVSLTERSKNLDRLIQKVSHLAETEGDHDSIISGLSFHNRMSPTDSTHCIYSMGLSLVLQGQKEVIIGDNVYQCHEGH
SMLTMMDLPVTSRIINASSQKPFLAVLLLLDIQVVNELVANLPVEAKTIISNDSHESFSVEFVDISLIDAVMRLVKMLDE
PKMIPHLADLVKKEIIIRLLNSSQGISFTPTGKVWFGKSKDSSNRELAKKQFRTTHPYG
>Mature_219_residues
MIPVSLTERSKNLDRLIQKVSHLAETEGDHDSIISGLSFHNRMSPTDSTHCIYSMGLSLVLQGQKEVIIGDNVYQCHEGH
SMLTMMDLPVTSRIINASSQKPFLAVLLLLDIQVVNELVANLPVEAKTIISNDSHESFSVEFVDISLIDAVMRLVKMLDE
PKMIPHLADLVKKEIIIRLLNSSQGISFTPTGKVWFGKSKDSSNRELAKKQFRTTHPYG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24454; Mature: 24454

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPVSLTERSKNLDRLIQKVSHLAETEGDHDSIISGLSFHNRMSPTDSTHCIYSMGLSLV
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHE
LQGQKEVIIGDNVYQCHEGHSMLTMMDLPVTSRIINASSQKPFLAVLLLLDIQVVNELVA
ECCCCEEEECCCEEEECCCCCEEEEECCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
NLPVEAKTIISNDSHESFSVEFVDISLIDAVMRLVKMLDEPKMIPHLADLVKKEIIIRLL
HCCCCHHHEECCCCCCCEEEEEEHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
NSSQGISFTPTGKVWFGKSKDSSNRELAKKQFRTTHPYG
CCCCCCEECCCCCEEECCCCCCCHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MIPVSLTERSKNLDRLIQKVSHLAETEGDHDSIISGLSFHNRMSPTDSTHCIYSMGLSLV
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHE
LQGQKEVIIGDNVYQCHEGHSMLTMMDLPVTSRIINASSQKPFLAVLLLLDIQVVNELVA
ECCCCEEEECCCEEEECCCCCEEEEECCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
NLPVEAKTIISNDSHESFSVEFVDISLIDAVMRLVKMLDEPKMIPHLADLVKKEIIIRLL
HCCCCHHHEECCCCCCCEEEEEEHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
NSSQGISFTPTGKVWFGKSKDSSNRELAKKQFRTTHPYG
CCCCCCEECCCCCEEECCCCCCCHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA