Click here to switch to the map view.

The map label for this gene is mdcC [H]

Identifier: 50084906

GI number: 50084906

Start: 1762168

End: 1762467

Strand: Direct

Name: mdcC [H]

Synonym: ACIAD1755

Alternate gene names: 50084906

Gene position: 1762168-1762467 (Clockwise)

Preceding gene: 50084905

Following gene: 50084907

Centisome position: 48.97

GC content: 41.67

Gene sequence:

>300_bases
ATGGAAATATTAAACTTTGAATTTACTGCAAAGCATCCACCTTTAAAAAAGACACGAGTGGGATGTGTGGGATCTGGTGA
TTTAGAAATTTTGATGCAACCTGCGACGACTGGAAAAACAACAATTCATGTCATTACTTCAGTCGATGGCAGTGAGCAAC
GCTGGAAAAACCTGTTTGAGCGTATTTTTTTAGAACAGGACATGCCTGCGGTGCATATGGATATTCATGATTTTGGTGCC
ACACCTGGCGTTGTCAGATTACGACTTGAACAGGCATTTGAGGAGGTGTTACATGGCTGA

Upstream 100 bases:

>100_bases
GCGCTTCGGCAGGTGGCGCTGCAGACTTGCTCGCTACACTATTATTTTTGGATCAGGCTGAACAACATAACAGCAGTGCA
CCGCAAGGAAGAAGAAATCA

Downstream 100 bases:

>100_bases
TATTGATTACTTACTCAATAAACAAAGTTTTATCGAGATGGATGCACGTGAGCGCGCCAAATCTCTATTTGATCTGAATA
GCTGTAAGGAATTACTCGAT

Product: malonate decarboxylase subunit delta

Products: NA

Alternate protein names: Malonate decarboxylase subunit delta [H]

Number of amino acids: Translated: 99; Mature: 99

Protein sequence:

>99_residues
MEILNFEFTAKHPPLKKTRVGCVGSGDLEILMQPATTGKTTIHVITSVDGSEQRWKNLFERIFLEQDMPAVHMDIHDFGA
TPGVVRLRLEQAFEEVLHG

Sequences:

>Translated_99_residues
MEILNFEFTAKHPPLKKTRVGCVGSGDLEILMQPATTGKTTIHVITSVDGSEQRWKNLFERIFLEQDMPAVHMDIHDFGA
TPGVVRLRLEQAFEEVLHG
>Mature_99_residues
MEILNFEFTAKHPPLKKTRVGCVGSGDLEILMQPATTGKTTIHVITSVDGSEQRWKNLFERIFLEQDMPAVHMDIHDFGA
TPGVVRLRLEQAFEEVLHG

Specific function: Subunit of malonate decarboxylase, it is an acyl carrier protein to which acetyl and malonyl thioester residues are bound via a 2'-(5''-phosphoribosyl)-3'-dephospho-CoA prosthetic group and turn over during the catalytic mechanism [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mdcC family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009662
- ProDom:   PD015450 [H]

Pfam domain/function: PF06857 MdcD [H]

EC number: NA

Molecular weight: Translated: 11159; Mature: 11159

Theoretical pI: Translated: 5.98; Mature: 5.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEILNFEFTAKHPPLKKTRVGCVGSGDLEILMQPATTGKTTIHVITSVDGSEQRWKNLFE
CCEECCEEECCCCCCCCCEECCCCCCCEEEEEECCCCCCEEEEEEEECCCCHHHHHHHHH
RIFLEQDMPAVHMDIHDFGATPGVVRLRLEQAFEEVLHG
HHHHCCCCCEEEEEHHHCCCCCCCEEHHHHHHHHHHHCC
>Mature Secondary Structure
MEILNFEFTAKHPPLKKTRVGCVGSGDLEILMQPATTGKTTIHVITSVDGSEQRWKNLFE
CCEECCEEECCCCCCCCCEECCCCCCCEEEEEECCCCCCEEEEEEEECCCCHHHHHHHHH
RIFLEQDMPAVHMDIHDFGATPGVVRLRLEQAFEEVLHG
HHHHCCCCCEEEEEHHHCCCCCCCEEHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA