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The map label for this gene is ompA [H]

Identifier: 50084798

GI number: 50084798

Start: 1637223

End: 1638068

Strand: Direct

Name: ompA [H]

Synonym: ACIAD1640

Alternate gene names: 50084798

Gene position: 1637223-1638068 (Clockwise)

Preceding gene: 50084797

Following gene: 50084799

Centisome position: 45.5

GC content: 34.87

Gene sequence:

>846_bases
ATGAATTTATTAGAAAAAACATTGATTTTAGGTGTTCTAAGTGCGGTTGCTGCAACAAATCTGAATGCAAATGACCAGAT
AGACGCATCAGGAACACAAGAAGTGCAGTTCCCAAAAATTGAAAAAAGCTATTTAAAGCAGGTTCAACGTTATGAGTACG
ATGATATTGCTCGTTTACAAGTGGGTTTAAATAAAGACCAACTTCGAGCATTATTAGGAAATCCTCAGTTCAATGAGGGG
ATGTTTATCAATAAAGTATGGAACTATGTTTTAGATATCCGAATTCCTGAAACTCAGGATTATAAGCGTTGTCAGTTGCG
TGTGGACTTTGAAAAGGGTATTGCACAAACCTTAAATTGGAAGGGTCAAGACTGCGATCAGTTTAATTATCCTCAACCAA
AGCCAATTGTCAAAACAGTAACTCAGCCAGTAATTGTTAAACAAAAAGAGCAGGTCGATATTATTAATTTATCTGCAGAT
GCATTGTTTAAGTTTAATGGATCTGGTTTGAATGATTTACTACCACGTGGTCATGAAGAACTTGAACGTTTGAGCAATGA
TATTCGAAATCATTATATTGCAGTGAGTCGTATTCATCTGGTGGGGCATACAGATCGTATTGGTTCTGATTCATACAATT
ATAATTTAGGATTAAAACGCGCTCAAACAGTTAAAAACTATTTGGTTAAAGATGGTATTCCTGCCAAGACAATTAGTTTT
TCAAGTGCAGGAAAAAGTCAGCCAATCAGTAATGGTTGTTTTGATATATCAAATATGACAAGTTTGAAAGAATGTCTTCA
AGTAGATCGACGTGTAAGCGTTGAAATTACTGGTGTTAAAAAGTAA

Upstream 100 bases:

>100_bases
GTGAAGCAAGTTTCCGCATCGGGATCAATGGGGTCATTGATTAATTTCATCAAAATTAACAACTTCATCTTTATAAAAAT
TTATACTTGAGAGTATTAGC

Downstream 100 bases:

>100_bases
TTACATTTACATTACGTTTATATGTGAAATAATAAGTCGATGATAGGGTTTCCTATCATCGATTTTTTTAAATCATTAAA
ATTTATAAATAAAAGATTTA

Product: antigen

Products: NA

Alternate protein names: Outer membrane protein II [H]

Number of amino acids: Translated: 281; Mature: 281

Protein sequence:

>281_residues
MNLLEKTLILGVLSAVAATNLNANDQIDASGTQEVQFPKIEKSYLKQVQRYEYDDIARLQVGLNKDQLRALLGNPQFNEG
MFINKVWNYVLDIRIPETQDYKRCQLRVDFEKGIAQTLNWKGQDCDQFNYPQPKPIVKTVTQPVIVKQKEQVDIINLSAD
ALFKFNGSGLNDLLPRGHEELERLSNDIRNHYIAVSRIHLVGHTDRIGSDSYNYNLGLKRAQTVKNYLVKDGIPAKTISF
SSAGKSQPISNGCFDISNMTSLKECLQVDRRVSVEITGVKK

Sequences:

>Translated_281_residues
MNLLEKTLILGVLSAVAATNLNANDQIDASGTQEVQFPKIEKSYLKQVQRYEYDDIARLQVGLNKDQLRALLGNPQFNEG
MFINKVWNYVLDIRIPETQDYKRCQLRVDFEKGIAQTLNWKGQDCDQFNYPQPKPIVKTVTQPVIVKQKEQVDIINLSAD
ALFKFNGSGLNDLLPRGHEELERLSNDIRNHYIAVSRIHLVGHTDRIGSDSYNYNLGLKRAQTVKNYLVKDGIPAKTISF
SSAGKSQPISNGCFDISNMTSLKECLQVDRRVSVEITGVKK
>Mature_281_residues
MNLLEKTLILGVLSAVAATNLNANDQIDASGTQEVQFPKIEKSYLKQVQRYEYDDIARLQVGLNKDQLRALLGNPQFNEG
MFINKVWNYVLDIRIPETQDYKRCQLRVDFEKGIAQTLNWKGQDCDQFNYPQPKPIVKTVTQPVIVKQKEQVDIINLSAD
ALFKFNGSGLNDLLPRGHEELERLSNDIRNHYIAVSRIHLVGHTDRIGSDSYNYNLGLKRAQTVKNYLVKDGIPAKTISF
SSAGKSQPISNGCFDISNMTSLKECLQVDRRVSVEITGVKK

Specific function: Required for the action of colicins K and L and for the stabilization of mating aggregates in conjugation. Serves as a receptor for a number of T-even like phages. Also acts as a porin with low permeability that allows slow penetration of small solutes [H

COG id: COG2885

COG function: function code M; Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

Organism=Escherichia coli, GI1787191, Length=131, Percent_Identity=38.9312977099237, Blast_Score=95, Evalue=6e-21,

Paralogues:

None

Copy number: 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2300 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 3380 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1480 Molecules/Cell In: Growth Phase, Mi

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011250
- InterPro:   IPR006664
- InterPro:   IPR002368
- InterPro:   IPR006690
- InterPro:   IPR000498
- InterPro:   IPR006665 [H]

Pfam domain/function: PF00691 OmpA; PF01389 OmpA_membrane [H]

EC number: NA

Molecular weight: Translated: 31789; Mature: 31789

Theoretical pI: Translated: 8.81; Mature: 8.81

Prosite motif: PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLLEKTLILGVLSAVAATNLNANDQIDASGTQEVQFPKIEKSYLKQVQRYEYDDIARLQ
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHE
VGLNKDQLRALLGNPQFNEGMFINKVWNYVLDIRIPETQDYKRCQLRVDFEKGIAQTLNW
ECCCHHHHHHHHCCCCCCCCEEHHHHHHEEEEEECCCCCCCCEEEEEECHHHHHHHHCCC
KGQDCDQFNYPQPKPIVKTVTQPVIVKQKEQVDIINLSADALFKFNGSGLNDLLPRGHEE
CCCCCCCCCCCCCCHHHHHHCCCCEECCCCCEEEEEECCCEEEEECCCCHHHHCCCCHHH
LERLSNDIRNHYIAVSRIHLVGHTDRIGSDSYNYNLGLKRAQTVKNYLVKDGIPAKTISF
HHHHHHHHHHHEEEEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEC
SSAGKSQPISNGCFDISNMTSLKECLQVDRRVSVEITGVKK
CCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEEEEEECCC
>Mature Secondary Structure
MNLLEKTLILGVLSAVAATNLNANDQIDASGTQEVQFPKIEKSYLKQVQRYEYDDIARLQ
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHE
VGLNKDQLRALLGNPQFNEGMFINKVWNYVLDIRIPETQDYKRCQLRVDFEKGIAQTLNW
ECCCHHHHHHHHCCCCCCCCEEHHHHHHEEEEEECCCCCCCCEEEEEECHHHHHHHHCCC
KGQDCDQFNYPQPKPIVKTVTQPVIVKQKEQVDIINLSADALFKFNGSGLNDLLPRGHEE
CCCCCCCCCCCCCCHHHHHHCCCCEECCCCCEEEEEECCCEEEEECCCCHHHHCCCCHHH
LERLSNDIRNHYIAVSRIHLVGHTDRIGSDSYNYNLGLKRAQTVKNYLVKDGIPAKTISF
HHHHHHHHHHHEEEEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEC
SSAGKSQPISNGCFDISNMTSLKECLQVDRRVSVEITGVKK
CCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1955870 [H]