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The map label for this gene is mmgC [H]

Identifier: 50084774

GI number: 50084774

Start: 1611486

End: 1612613

Strand: Direct

Name: mmgC [H]

Synonym: ACIAD1613

Alternate gene names: 50084774

Gene position: 1611486-1612613 (Clockwise)

Preceding gene: 50084773

Following gene: 50084781

Centisome position: 44.78

GC content: 42.46

Gene sequence:

>1128_bases
ATGATTTTGACAGAACAACAGCAGCAAATTAGAGAGATGACTCAACAATTTGCTCAAGAAAGAATTAAGCCACTCTCGGC
AGAGTGGGATCAAAAACATCAATTTCCCCACGATATCATTAAAGAAATGGGACAACTTGGATTGATGGGGATGTTGGTTC
CTGAAGTATGGGGTGGATCAGATACAGGCTATATCGCATATGCGACTGCTATTGAAGCAATTGCATCGGCAGATGGCGCT
TGCTCTACCATTATGAGTGTACATAATTCAGTCGTATGTATGCCAATCCTGAAATATGGTAATGACCAGCAAAAACATCA
ATTTTTAATTCCTTTGGCGCAAGGTCAGATGTTAGGTGCTTTTGCACTAACAGAGCCTCAAGCGGGTACAGATGCCAGTA
ATTTAAAAACCAAAGCGATTAAAGACGGTGACGATTACATTATTACTGGCAGCAAGCAGTTTATTACCTCGGCACAGCAT
GCAGATGTTGTTATTGTTTTTGCCGTAACAAATCCTGATGCTGGTAAAAAAGGAATTAGTGCTTTTCTTGTACCCACTGA
TACGGCTGGTTATAGTGTTGTAAGACTTGAAGAAAAAATGGGGCAGCATGCCTCTGACACAGGTCAGATCCAGCTTGATG
GAGTTCGCTTATCAAAAGATTATCTTCTTGGTGAAGAAGGTCAGGGGTATAAGATTGCGCTAGATAATTTGGCAGGTGGT
CGTATTGGTATTGCAGCACAATCGGTGGGGATGGCCCAGGCAGCATTGGATGTGGCAATTAAATATGCCAAAGAGCGAAC
TGCTTTTGGTCAACCCATTATTGAACATCAGGCTGTTGGCTTCCGCTTGGCAGATATGGCAACTCAAGTTGCAGTGGCAC
GACAAATGGTCTGGCATGCTGCAAGTCTGAGAGAATCAAATCAAGCATCACTGGTTGAAGCTTCAATGGCAAAGTTATTT
GCATCAGAAATGGCTGAAAAAGTATGTTCAGGTGCTCTCCAGACTTTGGGTGGCTATGGTTATCTGAAAGATTTTCCAGT
TGAGCAGATTTATCGAGATGTCCGAATTGCACAAATTTACGAAGGAACGAGCGATGTGCAGCGTATAGTCATTTCTAGAA
GTTTGTAA

Upstream 100 bases:

>100_bases
AGACAACGTCAACTAAAACGGGGTATTGCTGCTATTTGTATTGGTGGTGGGGAAGCGTTAGCTCTTGCAATAGAAATTGA
TTAAACTCTAGGGACAGAAC

Downstream 100 bases:

>100_bases
TTATATTGCTTTGTATTATTCATGCACATTGTAGTTTGTGAAATGTGCATGAATGTTTAAGCGGGTAGATAAAAATTAAT
AATTAAGCCATGCTTCGGGG

Product: acyl-CoA dehydrogenase protein (acdB-like)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 375; Mature: 375

Protein sequence:

>375_residues
MILTEQQQQIREMTQQFAQERIKPLSAEWDQKHQFPHDIIKEMGQLGLMGMLVPEVWGGSDTGYIAYATAIEAIASADGA
CSTIMSVHNSVVCMPILKYGNDQQKHQFLIPLAQGQMLGAFALTEPQAGTDASNLKTKAIKDGDDYIITGSKQFITSAQH
ADVVIVFAVTNPDAGKKGISAFLVPTDTAGYSVVRLEEKMGQHASDTGQIQLDGVRLSKDYLLGEEGQGYKIALDNLAGG
RIGIAAQSVGMAQAALDVAIKYAKERTAFGQPIIEHQAVGFRLADMATQVAVARQMVWHAASLRESNQASLVEASMAKLF
ASEMAEKVCSGALQTLGGYGYLKDFPVEQIYRDVRIAQIYEGTSDVQRIVISRSL

Sequences:

>Translated_375_residues
MILTEQQQQIREMTQQFAQERIKPLSAEWDQKHQFPHDIIKEMGQLGLMGMLVPEVWGGSDTGYIAYATAIEAIASADGA
CSTIMSVHNSVVCMPILKYGNDQQKHQFLIPLAQGQMLGAFALTEPQAGTDASNLKTKAIKDGDDYIITGSKQFITSAQH
ADVVIVFAVTNPDAGKKGISAFLVPTDTAGYSVVRLEEKMGQHASDTGQIQLDGVRLSKDYLLGEEGQGYKIALDNLAGG
RIGIAAQSVGMAQAALDVAIKYAKERTAFGQPIIEHQAVGFRLADMATQVAVARQMVWHAASLRESNQASLVEASMAKLF
ASEMAEKVCSGALQTLGGYGYLKDFPVEQIYRDVRIAQIYEGTSDVQRIVISRSL
>Mature_375_residues
MILTEQQQQIREMTQQFAQERIKPLSAEWDQKHQFPHDIIKEMGQLGLMGMLVPEVWGGSDTGYIAYATAIEAIASADGA
CSTIMSVHNSVVCMPILKYGNDQQKHQFLIPLAQGQMLGAFALTEPQAGTDASNLKTKAIKDGDDYIITGSKQFITSAQH
ADVVIVFAVTNPDAGKKGISAFLVPTDTAGYSVVRLEEKMGQHASDTGQIQLDGVRLSKDYLLGEEGQGYKIALDNLAGG
RIGIAAQSVGMAQAALDVAIKYAKERTAFGQPIIEHQAVGFRLADMATQVAVARQMVWHAASLRESNQASLVEASMAKLF
ASEMAEKVCSGALQTLGGYGYLKDFPVEQIYRDVRIAQIYEGTSDVQRIVISRSL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4557233, Length=373, Percent_Identity=44.2359249329759, Blast_Score=332, Evalue=2e-91,
Organism=Homo sapiens, GI4501859, Length=373, Percent_Identity=38.0697050938338, Blast_Score=281, Evalue=7e-76,
Organism=Homo sapiens, GI7656849, Length=376, Percent_Identity=39.6276595744681, Blast_Score=273, Evalue=2e-73,
Organism=Homo sapiens, GI4557231, Length=376, Percent_Identity=39.0957446808511, Blast_Score=270, Evalue=1e-72,
Organism=Homo sapiens, GI187960098, Length=376, Percent_Identity=39.0957446808511, Blast_Score=270, Evalue=1e-72,
Organism=Homo sapiens, GI226958412, Length=377, Percent_Identity=33.42175066313, Blast_Score=240, Evalue=2e-63,
Organism=Homo sapiens, GI4501857, Length=377, Percent_Identity=33.6870026525199, Blast_Score=222, Evalue=6e-58,
Organism=Homo sapiens, GI226958414, Length=356, Percent_Identity=33.7078651685393, Blast_Score=217, Evalue=2e-56,
Organism=Homo sapiens, GI21361497, Length=380, Percent_Identity=32.1052631578947, Blast_Score=205, Evalue=5e-53,
Organism=Homo sapiens, GI76496475, Length=380, Percent_Identity=33.1578947368421, Blast_Score=203, Evalue=2e-52,
Organism=Homo sapiens, GI4557235, Length=380, Percent_Identity=33.1578947368421, Blast_Score=203, Evalue=2e-52,
Organism=Homo sapiens, GI4503943, Length=376, Percent_Identity=29.7872340425532, Blast_Score=176, Evalue=3e-44,
Organism=Homo sapiens, GI7669494, Length=362, Percent_Identity=29.8342541436464, Blast_Score=164, Evalue=2e-40,
Organism=Homo sapiens, GI48976061, Length=399, Percent_Identity=27.5689223057644, Blast_Score=150, Evalue=3e-36,
Organism=Homo sapiens, GI211971008, Length=399, Percent_Identity=27.5689223057644, Blast_Score=150, Evalue=3e-36,
Organism=Homo sapiens, GI38505218, Length=346, Percent_Identity=29.1907514450867, Blast_Score=132, Evalue=4e-31,
Organism=Homo sapiens, GI218563752, Length=233, Percent_Identity=26.1802575107296, Blast_Score=74, Evalue=3e-13,
Organism=Escherichia coli, GI87081958, Length=380, Percent_Identity=30, Blast_Score=159, Evalue=2e-40,
Organism=Escherichia coli, GI1786223, Length=371, Percent_Identity=25.3369272237197, Blast_Score=150, Evalue=1e-37,
Organism=Escherichia coli, GI87082384, Length=283, Percent_Identity=27.9151943462898, Blast_Score=95, Evalue=6e-21,
Organism=Escherichia coli, GI87081702, Length=359, Percent_Identity=24.2339832869081, Blast_Score=79, Evalue=4e-16,
Organism=Caenorhabditis elegans, GI17508101, Length=371, Percent_Identity=40.4312668463612, Blast_Score=286, Evalue=9e-78,
Organism=Caenorhabditis elegans, GI17506239, Length=372, Percent_Identity=37.9032258064516, Blast_Score=274, Evalue=5e-74,
Organism=Caenorhabditis elegans, GI17569725, Length=378, Percent_Identity=38.0952380952381, Blast_Score=266, Evalue=2e-71,
Organism=Caenorhabditis elegans, GI17534899, Length=378, Percent_Identity=38.8888888888889, Blast_Score=265, Evalue=2e-71,
Organism=Caenorhabditis elegans, GI17570075, Length=377, Percent_Identity=36.8700265251989, Blast_Score=254, Evalue=4e-68,
Organism=Caenorhabditis elegans, GI17538396, Length=379, Percent_Identity=32.1899736147757, Blast_Score=236, Evalue=1e-62,
Organism=Caenorhabditis elegans, GI17533517, Length=375, Percent_Identity=34.1333333333333, Blast_Score=236, Evalue=2e-62,
Organism=Caenorhabditis elegans, GI71990804, Length=293, Percent_Identity=38.9078498293515, Blast_Score=223, Evalue=2e-58,
Organism=Caenorhabditis elegans, GI71985184, Length=350, Percent_Identity=32.8571428571429, Blast_Score=194, Evalue=4e-50,
Organism=Caenorhabditis elegans, GI17551932, Length=379, Percent_Identity=31.1345646437995, Blast_Score=185, Evalue=4e-47,
Organism=Caenorhabditis elegans, GI71982178, Length=273, Percent_Identity=35.5311355311355, Blast_Score=182, Evalue=2e-46,
Organism=Caenorhabditis elegans, GI17534353, Length=376, Percent_Identity=28.7234042553192, Blast_Score=179, Evalue=2e-45,
Organism=Caenorhabditis elegans, GI32563615, Length=231, Percent_Identity=39.8268398268398, Blast_Score=179, Evalue=2e-45,
Organism=Caenorhabditis elegans, GI17505929, Length=378, Percent_Identity=30.952380952381, Blast_Score=177, Evalue=6e-45,
Organism=Caenorhabditis elegans, GI71985192, Length=279, Percent_Identity=31.8996415770609, Blast_Score=148, Evalue=5e-36,
Organism=Caenorhabditis elegans, GI17531909, Length=241, Percent_Identity=33.6099585062241, Blast_Score=139, Evalue=2e-33,
Organism=Caenorhabditis elegans, GI17562446, Length=274, Percent_Identity=31.021897810219, Blast_Score=123, Evalue=2e-28,
Organism=Caenorhabditis elegans, GI17531913, Length=177, Percent_Identity=32.7683615819209, Blast_Score=99, Evalue=5e-21,
Organism=Caenorhabditis elegans, GI86563381, Length=273, Percent_Identity=29.3040293040293, Blast_Score=90, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI86563383, Length=273, Percent_Identity=29.3040293040293, Blast_Score=89, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI17540912, Length=299, Percent_Identity=24.7491638795987, Blast_Score=66, Evalue=4e-11,
Organism=Drosophila melanogaster, GI21356377, Length=373, Percent_Identity=42.627345844504, Blast_Score=321, Evalue=5e-88,
Organism=Drosophila melanogaster, GI24646207, Length=373, Percent_Identity=41.0187667560322, Blast_Score=298, Evalue=5e-81,
Organism=Drosophila melanogaster, GI24666513, Length=374, Percent_Identity=39.8395721925134, Blast_Score=286, Evalue=1e-77,
Organism=Drosophila melanogaster, GI24660351, Length=379, Percent_Identity=39.8416886543536, Blast_Score=270, Evalue=1e-72,
Organism=Drosophila melanogaster, GI21355753, Length=379, Percent_Identity=32.4538258575198, Blast_Score=214, Evalue=7e-56,
Organism=Drosophila melanogaster, GI281363737, Length=336, Percent_Identity=33.3333333333333, Blast_Score=192, Evalue=3e-49,
Organism=Drosophila melanogaster, GI19920834, Length=377, Percent_Identity=28.6472148541114, Blast_Score=167, Evalue=1e-41,
Organism=Drosophila melanogaster, GI45550141, Length=351, Percent_Identity=25.9259259259259, Blast_Score=75, Evalue=6e-14,
Organism=Drosophila melanogaster, GI221473076, Length=351, Percent_Identity=25.9259259259259, Blast_Score=75, Evalue=6e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 40650; Mature: 40650

Theoretical pI: Translated: 5.41; Mature: 5.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILTEQQQQIREMTQQFAQERIKPLSAEWDQKHQFPHDIIKEMGQLGLMGMLVPEVWGGS
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCHHHHHHHHHHHCHHHHHHHHHCCCC
DTGYIAYATAIEAIASADGACSTIMSVHNSVVCMPILKYGNDQQKHQFLIPLAQGQMLGA
CCCEEHHHHHHHHHHCCCCHHHHHHHHHCCEEEEEHHHCCCCCCCCEEEEEECCCCEEEE
FALTEPQAGTDASNLKTKAIKDGDDYIITGSKQFITSAQHADVVIVFAVTNPDAGKKGIS
EEECCCCCCCCHHHCCHHEECCCCCEEEECCHHHHCCCCCCCEEEEEEEECCCCCCCCCE
AFLVPTDTAGYSVVRLEEKMGQHASDTGQIQLDGVRLSKDYLLGEEGQGYKIALDNLAGG
EEEEECCCCCEEEEEEHHHHCCCCCCCCCEEEEEEEEECHHEECCCCCCEEEEEECCCCC
RIGIAAQSVGMAQAALDVAIKYAKERTAFGQPIIEHQAVGFRLADMATQVAVARQMVWHA
EEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHH
ASLRESNQASLVEASMAKLFASEMAEKVCSGALQTLGGYGYLKDFPVEQIYRDVRIAQIY
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH
EGTSDVQRIVISRSL
CCHHHHHHHHHHCCC
>Mature Secondary Structure
MILTEQQQQIREMTQQFAQERIKPLSAEWDQKHQFPHDIIKEMGQLGLMGMLVPEVWGGS
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCHHHHHHHHHHHCHHHHHHHHHCCCC
DTGYIAYATAIEAIASADGACSTIMSVHNSVVCMPILKYGNDQQKHQFLIPLAQGQMLGA
CCCEEHHHHHHHHHHCCCCHHHHHHHHHCCEEEEEHHHCCCCCCCCEEEEEECCCCEEEE
FALTEPQAGTDASNLKTKAIKDGDDYIITGSKQFITSAQHADVVIVFAVTNPDAGKKGIS
EEECCCCCCCCHHHCCHHEECCCCCEEEECCHHHHCCCCCCCEEEEEEEECCCCCCCCCE
AFLVPTDTAGYSVVRLEEKMGQHASDTGQIQLDGVRLSKDYLLGEEGQGYKIALDNLAGG
EEEEECCCCCEEEEEEHHHHCCCCCCCCCEEEEEEEEECHHEECCCCCCEEEEEECCCCC
RIGIAAQSVGMAQAALDVAIKYAKERTAFGQPIIEHQAVGFRLADMATQVAVARQMVWHA
EEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHH
ASLRESNQASLVEASMAKLFASEMAEKVCSGALQTLGGYGYLKDFPVEQIYRDVRIAQIY
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH
EGTSDVQRIVISRSL
CCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8759838; 8969508; 9384377 [H]