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The map label for this gene is yjgJ [C]

Identifier: 50084546

GI number: 50084546

Start: 1362827

End: 1363483

Strand: Reverse

Name: yjgJ [C]

Synonym: ACIAD1367

Alternate gene names: 50084546

Gene position: 1363483-1362827 (Counterclockwise)

Preceding gene: 50084547

Following gene: 50084545

Centisome position: 37.89

GC content: 36.68

Gene sequence:

>657_bases
ATGTCTAAAACAGTTTTATCTTCACTTTGCCCAACCGGTTGCGAATTGCCTCTTACACGACGAGGGCATGAGAGATGGTT
AGCACTTCTAAATAGTGCGACTGAACTGTTTCTAGAAAAAGGCTACGATGCCGTTTCACTAGATGATGTTGTCAACTATG
CTGGTGGCTCTAAGGCATCAATTTACAAATATTTTGGTAGTAAAGAAGGTTTATTTACCTCAATCTGTGATTATAGACGC
GAACTCTTTTTCAAAAATATTTGCGTCTCATTTGATAGCGAACGCGATGATCTTCGAAACTTCTTAATTCACACTTTAAT
TGGCTTTTACCAAAAAATTACTTGTGATGAAAATGCAGCTTTTATGCGCCTCATCATTGAACAATCCCAACGAAATCCTG
ATTTAGCCTTATATTTACACCAAAAAGGTCCAGAGCATGTACAAAAAACGATTGCTCATGCATTAGAACAGGCCACACTT
TTAGGTAAAATCCAATGCCAGAAACCTTATAATTCAGCCATGATGTTTTTTGGCATCCTTAGAAATATTGAATGGAAAAT
TCTTATGGGGGTGCCAACTACTATAGATAATGATGAAGTGGTTGAACATATCGAATATTGTGTTGATCTTTTTTTAAACG
CACACAAAGTAAGCTGA

Upstream 100 bases:

>100_bases
AACAATAAAAAAATATTAAACAGCTTAAATTTTCTGGCAAAGCATGAAACCTTATAATTTGTTATAATCCGAGACAGCGT
TACAAGTTCTCGTTGATTCC

Downstream 100 bases:

>100_bases
TTTTTTTGCATTTTCTTTGACATATAGTATATTAATCGATTGTTTTTTTCGTTCATCAACCAACAACTAATTGTTGTAAA
ACAATTATTGTGGAGTAACC

Product: transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Transcription Regulator Protein; Transcriptional Regulator TetR Family Protein; Regulatory Protein TetR; TetR-Family Transcriptional Regulator; Bacterial Regulatory Protein; TetR/AcrR Family Transcriptional Regulator; Transcriptional Regulator TetR/AcrR Family; TetR Family Transcription Regulator Protein; Bacterial Regulatory Protein TetR Family Protein; Transcriptional Regulator Protein; TetR Family Regulatory Protein; Regulatory Protein Tetr

Number of amino acids: Translated: 218; Mature: 217

Protein sequence:

>218_residues
MSKTVLSSLCPTGCELPLTRRGHERWLALLNSATELFLEKGYDAVSLDDVVNYAGGSKASIYKYFGSKEGLFTSICDYRR
ELFFKNICVSFDSERDDLRNFLIHTLIGFYQKITCDENAAFMRLIIEQSQRNPDLALYLHQKGPEHVQKTIAHALEQATL
LGKIQCQKPYNSAMMFFGILRNIEWKILMGVPTTIDNDEVVEHIEYCVDLFLNAHKVS

Sequences:

>Translated_218_residues
MSKTVLSSLCPTGCELPLTRRGHERWLALLNSATELFLEKGYDAVSLDDVVNYAGGSKASIYKYFGSKEGLFTSICDYRR
ELFFKNICVSFDSERDDLRNFLIHTLIGFYQKITCDENAAFMRLIIEQSQRNPDLALYLHQKGPEHVQKTIAHALEQATL
LGKIQCQKPYNSAMMFFGILRNIEWKILMGVPTTIDNDEVVEHIEYCVDLFLNAHKVS
>Mature_217_residues
SKTVLSSLCPTGCELPLTRRGHERWLALLNSATELFLEKGYDAVSLDDVVNYAGGSKASIYKYFGSKEGLFTSICDYRRE
LFFKNICVSFDSERDDLRNFLIHTLIGFYQKITCDENAAFMRLIIEQSQRNPDLALYLHQKGPEHVQKTIAHALEQATLL
GKIQCQKPYNSAMMFFGILRNIEWKILMGVPTTIDNDEVVEHIEYCVDLFLNAHKVS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24928; Mature: 24797

Theoretical pI: Translated: 6.39; Mature: 6.39

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKTVLSSLCPTGCELPLTRRGHERWLALLNSATELFLEKGYDAVSLDDVVNYAGGSKAS
CCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCHH
IYKYFGSKEGLFTSICDYRRELFFKNICVSFDSERDDLRNFLIHTLIGFYQKITCDENAA
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHH
FMRLIIEQSQRNPDLALYLHQKGPEHVQKTIAHALEQATLLGKIQCQKPYNSAMMFFGIL
HHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHH
RNIEWKILMGVPTTIDNDEVVEHIEYCVDLFLNAHKVS
HCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SKTVLSSLCPTGCELPLTRRGHERWLALLNSATELFLEKGYDAVSLDDVVNYAGGSKAS
CCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCHH
IYKYFGSKEGLFTSICDYRRELFFKNICVSFDSERDDLRNFLIHTLIGFYQKITCDENAA
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHH
FMRLIIEQSQRNPDLALYLHQKGPEHVQKTIAHALEQATLLGKIQCQKPYNSAMMFFGIL
HHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHH
RNIEWKILMGVPTTIDNDEVVEHIEYCVDLFLNAHKVS
HCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA