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The map label for this gene is clpS [H]

Identifier: 50084541

GI number: 50084541

Start: 1357679

End: 1358092

Strand: Direct

Name: clpS [H]

Synonym: ACIAD1362

Alternate gene names: 50084541

Gene position: 1357679-1358092 (Clockwise)

Preceding gene: 50084540

Following gene: 50084542

Centisome position: 37.73

GC content: 40.82

Gene sequence:

>414_bases
ATGCGAACATACAAGCGTCAAATTAGTTTAAGTGAAGTCAAAGCATCCTTTTATCAGACAGGGTATGTTGATTGGCATAT
CAATCCACGCTTGGGTGATTCGCAATCTGATGAGCCAGAGGGCGATATTGCGGTTCAAACAGCCCCTCCAGAATTAAAGC
GTCCTCCACTTTATGCAGTAGTATTACTGAATGACGATTACACCCCAATGGACTTTGTAATTGAAATTTTACAACAATAC
TTTGCATTAAATCTTGACCAAGCTACTCAAGTAATGCTAACAGTACATTATGAGGGAAAAGGTGTAGCTGGCGTCTATCC
ACGAGACATTGCGGAAACAAAAGCGAACCAAGTAAACAACTATGCTCGGTCTCAAGGTCATCCATTACTTTGTCAGATTG
AGCCCAAAGATTAA

Upstream 100 bases:

>100_bases
TAGCTGGCAAAGGGGTAAGCCTGTGGAAACATCTTCTGCGTTTGTAGGAGAAATTCCACAAGCTGAATCAAATGCAAATT
AATCGTGAACATAAGAGTCT

Downstream 100 bases:

>100_bases
GGGGGTCGTATGCTCAGTCGTCAATTAGAAGTGTCCTTACGTTTGGCTGTAAGCATGGCTCGTCAAAAAAGGCACGAATT
TCTTACTGTAGAACATTTGT

Product: ATP-dependent Clp protease adaptor protein ClpS

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 137; Mature: 137

Protein sequence:

>137_residues
MRTYKRQISLSEVKASFYQTGYVDWHINPRLGDSQSDEPEGDIAVQTAPPELKRPPLYAVVLLNDDYTPMDFVIEILQQY
FALNLDQATQVMLTVHYEGKGVAGVYPRDIAETKANQVNNYARSQGHPLLCQIEPKD

Sequences:

>Translated_137_residues
MRTYKRQISLSEVKASFYQTGYVDWHINPRLGDSQSDEPEGDIAVQTAPPELKRPPLYAVVLLNDDYTPMDFVIEILQQY
FALNLDQATQVMLTVHYEGKGVAGVYPRDIAETKANQVNNYARSQGHPLLCQIEPKD
>Mature_137_residues
MRTYKRQISLSEVKASFYQTGYVDWHINPRLGDSQSDEPEGDIAVQTAPPELKRPPLYAVVLLNDDYTPMDFVIEILQQY
FALNLDQATQVMLTVHYEGKGVAGVYPRDIAETKANQVNNYARSQGHPLLCQIEPKD

Specific function: Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation [H]

COG id: COG2127

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ClpS family [H]

Homologues:

Organism=Escherichia coli, GI1787108, Length=83, Percent_Identity=55.421686746988, Blast_Score=112, Evalue=9e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022935
- InterPro:   IPR003769
- InterPro:   IPR014719 [H]

Pfam domain/function: PF02617 ClpS [H]

EC number: NA

Molecular weight: Translated: 15559; Mature: 15559

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTYKRQISLSEVKASFYQTGYVDWHINPRLGDSQSDEPEGDIAVQTAPPELKRPPLYAV
CCCHHHHCCHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEE
VLLNDDYTPMDFVIEILQQYFALNLDQATQVMLTVHYEGKGVAGVYPRDIAETKANQVNN
EEECCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHH
YARSQGHPLLCQIEPKD
HHHCCCCEEEEEECCCC
>Mature Secondary Structure
MRTYKRQISLSEVKASFYQTGYVDWHINPRLGDSQSDEPEGDIAVQTAPPELKRPPLYAV
CCCHHHHCCHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEE
VLLNDDYTPMDFVIEILQQYFALNLDQATQVMLTVHYEGKGVAGVYPRDIAETKANQVNN
EEECCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHH
YARSQGHPLLCQIEPKD
HHHCCCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA