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The map label for this gene is yfgC [C]

Identifier: 50084509

GI number: 50084509

Start: 1325989

End: 1327434

Strand: Direct

Name: yfgC [C]

Synonym: ACIAD1328

Alternate gene names: 50084509

Gene position: 1325989-1327434 (Clockwise)

Preceding gene: 50084508

Following gene: 50084510

Centisome position: 36.85

GC content: 40.94

Gene sequence:

>1446_bases
TTGAAACGAAGCCTTTTGGCATGTGCTATGAGCTGTATGATGTTAACTGTATCAGCTCACTCTGATTTTGATGTTCGCAA
TGTGGATAGCCAGTTTCATGTACCTGAAATTGGAGGTGGTGTTGGTCTGATTGATCAGCAAAAAGAACGACAAATCGGCG
AAAAAGTATTTCGAGAAATACAAAAGCAGATGCCTGTTGTGCATGATCCGTGGCTTCAAGAGCAATATTCCCAGATATTT
TTAAGAGTTTTAGCTCAAACTTCAATTACTCAGCCAGTAGGATTGGTCATTATTAAAGATCCTCAAATTAATGCATTTGC
TGTTCCAGGTGGGTTATTTGCCTTAAATACAGGTTTAATCGCAAATGCACGAAATATTGATGAGGTGGCTGGGGTAATGG
CGCATGAAGTAGCTCATGTTACACAACGTCATTACAGTCGTTCACAAGAAGCCTTTAAGGGACAAGGTTTACTCGCTTTA
GCCGGTATACTGGTGGGCGCTGCTGTTGCGACAACATCAAATGCTGATGTTGGTTCTGCGGTGATGTTAGGCACTCAGGC
TGCACTTATGGATCGACAACTGACCTACAGCCGTAATCAGGAACGTGAAGCTGATCGTATTGGTATGCAATATATGTATG
CGGCGGGTTACAACCCTCAAAGTATGGCAGACTTTTTTGAAACAATGCAGCGGTCACGTGTAGGCTCAAGCTTCATGCCT
GATTTCTGGATGACTCATCCTCTCACAACTGAACGTATGAGCGAGGCCCGTTTACGCGCCAATCAGCTTCCAAAAGTTGA
AACTAAGCTTTATGACCCGAATTTCCAATTATTAAAATGGTATACGCTGGCAGTCTCAGATCCATCTTCAGAAAAAATAT
TAGAAAATGTAGTTAAACAAGGCAATAAAGAGGCGCAGTTGGCGCTAGGTGCTTATTATGTTGGGCAAGGTGATTTCGTA
AAAGCGCAGAAGCAATTAGATGATATAAAATCTCAGTTTAATGAGAATACTCTTTATTGTTTAATACAGACCAATATTTA
TTTGGGACAAAATGAATTGGATCAGGCATATTCGTCTATTGTTAACATTCAACGTGCAATGCCAGAAAGTCGAGCATTGG
CCTATAAACTTGCAGAGGTCATGATTTTACAAGGTAAAGCAGGAGATACTTTGCAGTTAATACAACCCTTTGTTAATCGA
AATCCGAGAGATTTAGAAGGGTGGCAATTAATGCAACAGGCTTCTTCAATTGATCGGATATCTCCTGTACAGACAGTTAA
TACACTTAGATACCGTGCGGAAGTGCAGTTTTGGTCGGGCAATGAGGAAAATGCAATTAAATCATTATTGCATGCGCAGC
GCCTTGCTAAAGGAAATGAGTCCTTATCTGCCAGAATTGATAGTCGCTTAAAGCAGATGCAATCAGATTACACGATGAAA
ATCTAG

Upstream 100 bases:

>100_bases
GAAAGTATTGGGATACTTTAAAATTTCATAACACTTTATTTCGAATTTGAAAATTCTGGAATGTTATAGTATTTGAAATT
CAGCTAGATAGAGTGCGATA

Downstream 100 bases:

>100_bases
GCCTGTATACATATAAAGATTGAGAAAAATAGAATAGCGTTGTATAAATGACAGAGATTAAAATTTTAACCTATATGAAA
TGAATAAAAAGATGATTGTG

Product: signal peptide

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 481; Mature: 481

Protein sequence:

>481_residues
MKRSLLACAMSCMMLTVSAHSDFDVRNVDSQFHVPEIGGGVGLIDQQKERQIGEKVFREIQKQMPVVHDPWLQEQYSQIF
LRVLAQTSITQPVGLVIIKDPQINAFAVPGGLFALNTGLIANARNIDEVAGVMAHEVAHVTQRHYSRSQEAFKGQGLLAL
AGILVGAAVATTSNADVGSAVMLGTQAALMDRQLTYSRNQEREADRIGMQYMYAAGYNPQSMADFFETMQRSRVGSSFMP
DFWMTHPLTTERMSEARLRANQLPKVETKLYDPNFQLLKWYTLAVSDPSSEKILENVVKQGNKEAQLALGAYYVGQGDFV
KAQKQLDDIKSQFNENTLYCLIQTNIYLGQNELDQAYSSIVNIQRAMPESRALAYKLAEVMILQGKAGDTLQLIQPFVNR
NPRDLEGWQLMQQASSIDRISPVQTVNTLRYRAEVQFWSGNEENAIKSLLHAQRLAKGNESLSARIDSRLKQMQSDYTMK
I

Sequences:

>Translated_481_residues
MKRSLLACAMSCMMLTVSAHSDFDVRNVDSQFHVPEIGGGVGLIDQQKERQIGEKVFREIQKQMPVVHDPWLQEQYSQIF
LRVLAQTSITQPVGLVIIKDPQINAFAVPGGLFALNTGLIANARNIDEVAGVMAHEVAHVTQRHYSRSQEAFKGQGLLAL
AGILVGAAVATTSNADVGSAVMLGTQAALMDRQLTYSRNQEREADRIGMQYMYAAGYNPQSMADFFETMQRSRVGSSFMP
DFWMTHPLTTERMSEARLRANQLPKVETKLYDPNFQLLKWYTLAVSDPSSEKILENVVKQGNKEAQLALGAYYVGQGDFV
KAQKQLDDIKSQFNENTLYCLIQTNIYLGQNELDQAYSSIVNIQRAMPESRALAYKLAEVMILQGKAGDTLQLIQPFVNR
NPRDLEGWQLMQQASSIDRISPVQTVNTLRYRAEVQFWSGNEENAIKSLLHAQRLAKGNESLSARIDSRLKQMQSDYTMK
I
>Mature_481_residues
MKRSLLACAMSCMMLTVSAHSDFDVRNVDSQFHVPEIGGGVGLIDQQKERQIGEKVFREIQKQMPVVHDPWLQEQYSQIF
LRVLAQTSITQPVGLVIIKDPQINAFAVPGGLFALNTGLIANARNIDEVAGVMAHEVAHVTQRHYSRSQEAFKGQGLLAL
AGILVGAAVATTSNADVGSAVMLGTQAALMDRQLTYSRNQEREADRIGMQYMYAAGYNPQSMADFFETMQRSRVGSSFMP
DFWMTHPLTTERMSEARLRANQLPKVETKLYDPNFQLLKWYTLAVSDPSSEKILENVVKQGNKEAQLALGAYYVGQGDFV
KAQKQLDDIKSQFNENTLYCLIQTNIYLGQNELDQAYSSIVNIQRAMPESRALAYKLAEVMILQGKAGDTLQLIQPFVNR
NPRDLEGWQLMQQASSIDRISPVQTVNTLRYRAEVQFWSGNEENAIKSLLHAQRLAKGNESLSARIDSRLKQMQSDYTMK
I

Specific function: Unknown

COG id: COG4783

COG function: function code R; Putative Zn-dependent protease, contains TPR repeats

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 4 TPR repeats [H]

Homologues:

Organism=Escherichia coli, GI1788840, Length=426, Percent_Identity=28.169014084507, Blast_Score=169, Evalue=4e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001915
- InterPro:   IPR013026
- InterPro:   IPR011990 [H]

Pfam domain/function: PF01435 Peptidase_M48 [H]

EC number: NA

Molecular weight: Translated: 53943; Mature: 53943

Theoretical pI: Translated: 7.25; Mature: 7.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRSLLACAMSCMMLTVSAHSDFDVRNVDSQFHVPEIGGGVGLIDQQKERQIGEKVFREI
CCHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
QKQMPVVHDPWLQEQYSQIFLRVLAQTSITQPVGLVIIKDPQINAFAVPGGLFALNTGLI
HHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEECCCCCEEECCCCE
ANARNIDEVAGVMAHEVAHVTQRHYSRSQEAFKGQGLLALAGILVGAAVATTSNADVGSA
ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCH
VMLGTQAALMDRQLTYSRNQEREADRIGMQYMYAAGYNPQSMADFFETMQRSRVGSSFMP
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHCCCCCCC
DFWMTHPLTTERMSEARLRANQLPKVETKLYDPNFQLLKWYTLAVSDPSSEKILENVVKQ
CHHCCCCCCHHHHHHHHHHHHCCCCCHHEEECCCCEEEEEEEEEECCCCHHHHHHHHHHC
GNKEAQLALGAYYVGQGDFVKAQKQLDDIKSQFNENTLYCLIQTNIYLGQNELDQAYSSI
CCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEEEECEEECCHHHHHHHHHH
VNIQRAMPESRALAYKLAEVMILQGKAGDTLQLIQPFVNRNPRDLEGWQLMQQASSIDRI
HHHHHHCCHHHHHHHHHHHHHEEECCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCHHC
SPVQTVNTLRYRAEVQFWSGNEENAIKSLLHAQRLAKGNESLSARIDSRLKQMQSDYTMK
CHHHHHHHHHEEEEEEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCC
I
C
>Mature Secondary Structure
MKRSLLACAMSCMMLTVSAHSDFDVRNVDSQFHVPEIGGGVGLIDQQKERQIGEKVFREI
CCHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
QKQMPVVHDPWLQEQYSQIFLRVLAQTSITQPVGLVIIKDPQINAFAVPGGLFALNTGLI
HHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEECCCCCEEECCCCE
ANARNIDEVAGVMAHEVAHVTQRHYSRSQEAFKGQGLLALAGILVGAAVATTSNADVGSA
ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCH
VMLGTQAALMDRQLTYSRNQEREADRIGMQYMYAAGYNPQSMADFFETMQRSRVGSSFMP
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHCCCCCCC
DFWMTHPLTTERMSEARLRANQLPKVETKLYDPNFQLLKWYTLAVSDPSSEKILENVVKQ
CHHCCCCCCHHHHHHHHHHHHCCCCCHHEEECCCCEEEEEEEEEECCCCHHHHHHHHHHC
GNKEAQLALGAYYVGQGDFVKAQKQLDDIKSQFNENTLYCLIQTNIYLGQNELDQAYSSI
CCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEEEECEEECCHHHHHHHHHH
VNIQRAMPESRALAYKLAEVMILQGKAGDTLQLIQPFVNRNPRDLEGWQLMQQASSIDRI
HHHHHHCCHHHHHHHHHHHHHEEECCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCHHC
SPVQTVNTLRYRAEVQFWSGNEENAIKSLLHAQRLAKGNESLSARIDSRLKQMQSDYTMK
CHHHHHHHHHEEEEEEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCC
I
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]