| Definition | Acinetobacter sp. ADP1 chromosome, complete genome. |
|---|---|
| Accession | NC_005966 |
| Length | 3,598,621 |
Click here to switch to the map view.
The map label for this gene is artJ [H]
Identifier: 50084480
GI number: 50084480
Start: 1298781
End: 1299584
Strand: Direct
Name: artJ [H]
Synonym: ACIAD1297
Alternate gene names: 50084480
Gene position: 1298781-1299584 (Clockwise)
Preceding gene: 50084479
Following gene: 50084481
Centisome position: 36.09
GC content: 41.79
Gene sequence:
>804_bases ATGAAACAGACCTTTAAAAATTTTTCATGTCGGATGGCTTTATCTGTCGCCGCAGTCACATGCTTTTCATCAATGAGCCA TGCTGCACCATTACTCACCAATGGCGTGTTTAAAGTCGGTTTAGAGGCAACTTATCCACCGTTTGAATCTTATGACAGCA ATAAAAATATCGTTGGTCTTGATCCAGATTTTGCTGCGTTGATTGCCAAAGATTTAAATGCTAAACCTCAACTGATTGAT ACCAAGTTTACCAGCCTGATTTTGGGTCTGGGTAAAAAGTATGATGCGGTTATTTCAGGGTTATATGTCACTCCAGAGCG TCTAAAACAAGCAGATGCCATTCCTTATGCCATGACGGGTGCTTCAATTATTGCGCTTAAAAATAGCAACATTTTACCAA AGACTGAAAATGATTTGTGCGGTGTAAAAGTAGGTTTGCAGCAAGGAACTGCATGGGTGGCCAGTCTTAAGAAACATTCA GAGGCTTATTGTATTAAAAATGGAAAACCCGCCATTCAGGTGATGGAGTTTCCAACAGCTCCTGAAGTCTCTCAGGCATT GATGTCAAGAAACGTAAGTGCACAACTGGAAATTGCGCCAGCGGCAAAAATTCTCGTTGAGAAAAGTCGTGGTCGTCTTG TAGTGAGTTCTTCACGTCTGGTCTATCCATTGCCACTCGGGATCTATGTCACCAAAGGAAATACCGCACTTGTCTCAGCC ATTAAATCATCGCTCGCGAAAGCCAAGGCCAATGGTCAATATAGCGCGCTGATCAAAAAATATAATTTAGAGCCTGTTCA TTAA
Upstream 100 bases:
>100_bases GAGTTGCAATTATCAGAAAGGGCGAGAGCAACCCATACTTTTGGTCACCTGAAACAACAAGCAAAGCAAAAAACCACTAG CAATTTGTGAGGATTGATTT
Downstream 100 bases:
>100_bases TTGTTTGAGATTGGGAGTCAGTATGGAATTCGATTGGGAATATTTCTTCTCTTTATTTGGCTTTGCAGAGTTTTGGAAGG CCTGCGTAACTGTCATTGTA
Product: amino acid ABC transporter periplasmic substrate-binding protein
Products: ADP; phosphate; L-arginine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 267; Mature: 267
Protein sequence:
>267_residues MKQTFKNFSCRMALSVAAVTCFSSMSHAAPLLTNGVFKVGLEATYPPFESYDSNKNIVGLDPDFAALIAKDLNAKPQLID TKFTSLILGLGKKYDAVISGLYVTPERLKQADAIPYAMTGASIIALKNSNILPKTENDLCGVKVGLQQGTAWVASLKKHS EAYCIKNGKPAIQVMEFPTAPEVSQALMSRNVSAQLEIAPAAKILVEKSRGRLVVSSSRLVYPLPLGIYVTKGNTALVSA IKSSLAKAKANGQYSALIKKYNLEPVH
Sequences:
>Translated_267_residues MKQTFKNFSCRMALSVAAVTCFSSMSHAAPLLTNGVFKVGLEATYPPFESYDSNKNIVGLDPDFAALIAKDLNAKPQLID TKFTSLILGLGKKYDAVISGLYVTPERLKQADAIPYAMTGASIIALKNSNILPKTENDLCGVKVGLQQGTAWVASLKKHS EAYCIKNGKPAIQVMEFPTAPEVSQALMSRNVSAQLEIAPAAKILVEKSRGRLVVSSSRLVYPLPLGIYVTKGNTALVSA IKSSLAKAKANGQYSALIKKYNLEPVH >Mature_267_residues MKQTFKNFSCRMALSVAAVTCFSSMSHAAPLLTNGVFKVGLEATYPPFESYDSNKNIVGLDPDFAALIAKDLNAKPQLID TKFTSLILGLGKKYDAVISGLYVTPERLKQADAIPYAMTGASIIALKNSNILPKTENDLCGVKVGLQQGTAWVASLKKHS EAYCIKNGKPAIQVMEFPTAPEVSQALMSRNVSAQLEIAPAAKILVEKSRGRLVVSSSRLVYPLPLGIYVTKGNTALVSA IKSSLAKAKANGQYSALIKKYNLEPVH
Specific function: Part of the ABC transporter complex ArtPIQMJ involved in arginine transport. Binds L-arginine with high affinity [H]
COG id: COG0834
COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 3 family [H]
Homologues:
Organism=Escherichia coli, GI1787085, Length=229, Percent_Identity=32.3144104803493, Blast_Score=97, Evalue=1e-21, Organism=Escherichia coli, GI1788228, Length=255, Percent_Identity=29.4117647058824, Blast_Score=94, Evalue=1e-20, Organism=Escherichia coli, GI1787088, Length=258, Percent_Identity=27.906976744186, Blast_Score=82, Evalue=2e-17, Organism=Escherichia coli, GI1788648, Length=236, Percent_Identity=28.3898305084746, Blast_Score=76, Evalue=3e-15, Organism=Escherichia coli, GI1788649, Length=235, Percent_Identity=27.2340425531915, Blast_Score=69, Evalue=5e-13,
Paralogues:
None
Copy number: 1180 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015683 - InterPro: IPR005768 - InterPro: IPR001638 - InterPro: IPR018313 [H]
Pfam domain/function: PF00497 SBP_bac_3 [H]
EC number: NA
Molecular weight: Translated: 28681; Mature: 28681
Theoretical pI: Translated: 10.02; Mature: 10.02
Prosite motif: PS00579 RIBOSOMAL_L29
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQTFKNFSCRMALSVAAVTCFSSMSHAAPLLTNGVFKVGLEATYPPFESYDSNKNIVGL CCCCHHCCHHHHHHHHHHHHHHHHHHHCCHHHHCCEEEECCCCCCCCCCCCCCCCCEEEE DPDFAALIAKDLNAKPQLIDTKFTSLILGLGKKYDAVISGLYVTPERLKQADAIPYAMTG CCCHHHHHHHHCCCCCCEEHHHHHHHHHHCCCHHHHHHHCEEECHHHHHHHCCCCEEECC ASIIALKNSNILPKTENDLCGVKVGLQQGTAWVASLKKHSEAYCIKNGKPAIQVMEFPTA CEEEEEECCCCCCCCCCCCCEEEEECCCCHHHHHHHHHCCCEEEEECCCCEEEEEECCCC PEVSQALMSRNVSAQLEIAPAAKILVEKSRGRLVVSSSRLVYPLPLGIYVTKGNTALVSA HHHHHHHHHCCCCEEEEECCCEEEEEECCCCEEEEECCCEEEEECEEEEEECCCHHHHHH IKSSLAKAKANGQYSALIKKYNLEPVH HHHHHHHHHCCCHHEEHHHHCCCCCCC >Mature Secondary Structure MKQTFKNFSCRMALSVAAVTCFSSMSHAAPLLTNGVFKVGLEATYPPFESYDSNKNIVGL CCCCHHCCHHHHHHHHHHHHHHHHHHHCCHHHHCCEEEECCCCCCCCCCCCCCCCCEEEE DPDFAALIAKDLNAKPQLIDTKFTSLILGLGKKYDAVISGLYVTPERLKQADAIPYAMTG CCCHHHHHHHHCCCCCCEEHHHHHHHHHHCCCHHHHHHHCEEECHHHHHHHCCCCEEECC ASIIALKNSNILPKTENDLCGVKVGLQQGTAWVASLKKHSEAYCIKNGKPAIQVMEFPTA CEEEEEECCCCCCCCCCCCCEEEEECCCCHHHHHHHHHCCCEEEEECCCCEEEEEECCCC PEVSQALMSRNVSAQLEIAPAAKILVEKSRGRLVVSSSRLVYPLPLGIYVTKGNTALVSA HHHHHHHHHCCCCEEEEECCCEEEEEECCCCEEEEECCCEEEEECEEEEEECCCHHHHHH IKSSLAKAKANGQYSALIKKYNLEPVH HHHHHHHHHCCCHHEEHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-arginine [Periplasm]; H2O [C]
Specific reaction: ATP + L-arginine [Periplasm] + H2O = ADP + phosphate + L-arginine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8501075; 8905232; 9278503; 9298646; 9600841 [H]