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The map label for this gene is desA3 [H]

Identifier: 50084397

GI number: 50084397

Start: 1209763

End: 1210857

Strand: Direct

Name: desA3 [H]

Synonym: ACIAD1208

Alternate gene names: 50084397

Gene position: 1209763-1210857 (Clockwise)

Preceding gene: 50084396

Following gene: 50084399

Centisome position: 33.62

GC content: 40.37

Gene sequence:

>1095_bases
ATGAACGCACCTGTAAAATTTGAATATTTTAAAAATCCCAAAAATAGAGAATTAACTGCGGTTGAACTTGAAGCATTTGC
AAAAGAGCTGGATCAAATCAAGCAAGAAGTCTTGGATGATATCGGTGAGAAAGATGCAAAATATATCCGCCGTGTTTACT
CGGCTGTTCGCTACAGCAGTATGTTGGGACGTGCCTGCCTGTTTGCTGGCTGGTTTCCACCAGCGTGGATTTTAGGCACT
GGATTGCTCGGATTTTCTAAAATTATGGAAAATATGGAGCTTGGACACAATGTCATGCATGGTCAATATGACTGGATGAA
TGATCCTAAGTTTAATGGTCAAACCTACGAATGGGATACTGTAGGTACAGCGGATAACTGGCGCCAAACGCATAACTACA
AGCATCATACCTATACCAATATTAAGGGCATAGATGATGATATCGGTTATGGATTACTGCGTTTATTCCCAGAGCAACGT
TGGAAGCCTGGATTTTTGTTACAGCCGATCTATAGTATTCCATTTTGTATGCTATTTCAGTGGGGCGTTGCGATTCAGAA
CCTTGAGATTGGTAAACTGATTTATAAACGCAAAACATGGAAGCAGTTTAAACAAGAGTGTAAACCGACTCAGAAAAAAA
TTGGAAAACAATTGTTTAAAGATTATGTTTTCTTCCCGTTAATTGCAGGCCCAGCTGCTTTACCTGTGTTTACGGGTAAC
TTGGTTGCTAATGGTATCCGTAATGCGTGGACATTTAGTATTATTTTCTGTGGTCACTTCACCAAAGATGTCGAAGTATT
TCCGAAAACAGTACTGCAAAATGAAACGCGTGGTCACTGGTATATGCGTCAGATTCGTGGCTCGTCTAACTTGACGGGTT
CAGAAGCATTTCACATTCTGACAGGTCACTTGAGTCATCAGATTGAACATCATTTATTTCCTGATGTACCCGCACGCCGC
TACCGTCAAATGGCACCAAAGGTAGAGGCAGTTTGTAAAAAATACGGTCTCAACTACAATAATGCCAGCTTGTTCAAGCA
GTATGGTCAAGTATTAGGACGTATTGTGAAATACGCTTTTCCATTTAAAAAGTAA

Upstream 100 bases:

>100_bases
TGAATGCAAGTGAAAACTCAGAACCCAACAATCTTTTAAAAATCTGTGTGAACTCGGCTAAATCTGATCTTGTTATTGAT
CTTTAATTGTGAGAACTCCC

Downstream 100 bases:

>100_bases
GTACTTGATCGTACAAAAAACACATGCCAGATTTATCTGGCATGTGTTTTTATGTGTTGATTCAGGGTTTTTGTAAATGT
TATTTCAATTGAATCGAGCC

Product: fatty acid desaturase

Products: NA

Alternate protein names: Delta(9)-desaturase; Stearoyl-CoA desaturase [H]

Number of amino acids: Translated: 364; Mature: 364

Protein sequence:

>364_residues
MNAPVKFEYFKNPKNRELTAVELEAFAKELDQIKQEVLDDIGEKDAKYIRRVYSAVRYSSMLGRACLFAGWFPPAWILGT
GLLGFSKIMENMELGHNVMHGQYDWMNDPKFNGQTYEWDTVGTADNWRQTHNYKHHTYTNIKGIDDDIGYGLLRLFPEQR
WKPGFLLQPIYSIPFCMLFQWGVAIQNLEIGKLIYKRKTWKQFKQECKPTQKKIGKQLFKDYVFFPLIAGPAALPVFTGN
LVANGIRNAWTFSIIFCGHFTKDVEVFPKTVLQNETRGHWYMRQIRGSSNLTGSEAFHILTGHLSHQIEHHLFPDVPARR
YRQMAPKVEAVCKKYGLNYNNASLFKQYGQVLGRIVKYAFPFKK

Sequences:

>Translated_364_residues
MNAPVKFEYFKNPKNRELTAVELEAFAKELDQIKQEVLDDIGEKDAKYIRRVYSAVRYSSMLGRACLFAGWFPPAWILGT
GLLGFSKIMENMELGHNVMHGQYDWMNDPKFNGQTYEWDTVGTADNWRQTHNYKHHTYTNIKGIDDDIGYGLLRLFPEQR
WKPGFLLQPIYSIPFCMLFQWGVAIQNLEIGKLIYKRKTWKQFKQECKPTQKKIGKQLFKDYVFFPLIAGPAALPVFTGN
LVANGIRNAWTFSIIFCGHFTKDVEVFPKTVLQNETRGHWYMRQIRGSSNLTGSEAFHILTGHLSHQIEHHLFPDVPARR
YRQMAPKVEAVCKKYGLNYNNASLFKQYGQVLGRIVKYAFPFKK
>Mature_364_residues
MNAPVKFEYFKNPKNRELTAVELEAFAKELDQIKQEVLDDIGEKDAKYIRRVYSAVRYSSMLGRACLFAGWFPPAWILGT
GLLGFSKIMENMELGHNVMHGQYDWMNDPKFNGQTYEWDTVGTADNWRQTHNYKHHTYTNIKGIDDDIGYGLLRLFPEQR
WKPGFLLQPIYSIPFCMLFQWGVAIQNLEIGKLIYKRKTWKQFKQECKPTQKKIGKQLFKDYVFFPLIAGPAALPVFTGN
LVANGIRNAWTFSIIFCGHFTKDVEVFPKTVLQNETRGHWYMRQIRGSSNLTGSEAFHILTGHLSHQIEHHLFPDVPARR
YRQMAPKVEAVCKKYGLNYNNASLFKQYGQVLGRIVKYAFPFKK

Specific function: Desaturates stearoyl-CoA to form oleoyl-CoA [H]

COG id: COG3239

COG function: function code I; Fatty acid desaturase

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein (Probable). Note=Has been shown to be membrane-associated but no reliable trans-membrane regions are predicted by bioinformatics tools [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fatty acid desaturase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005804 [H]

Pfam domain/function: PF00487 FA_desaturase [H]

EC number: NA

Molecular weight: Translated: 42359; Mature: 42359

Theoretical pI: Translated: 9.89; Mature: 9.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAPVKFEYFKNPKNRELTAVELEAFAKELDQIKQEVLDDIGEKDAKYIRRVYSAVRYSS
CCCCEEEHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
MLGRACLFAGWFPPAWILGTGLLGFSKIMENMELGHNVMHGQYDWMNDPKFNGQTYEWDT
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCEEECCC
VGTADNWRQTHNYKHHTYTNIKGIDDDIGYGLLRLFPEQRWKPGFLLQPIYSIPFCMLFQ
CCCCHHHHHHCCCCCCEECCCCCCCCHHHHHHHHHCHHHCCCCCCCCCHHHHHHHHHHHH
WGVAIQNLEIGKLIYKRKTWKQFKQECKPTQKKIGKQLFKDYVFFPLIAGPAALPVFTGN
HHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHEEHH
LVANGIRNAWTFSIIFCGHFTKDVEVFPKTVLQNETRGHWYMRQIRGSSNLTGSEAFHIL
HHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCHHHHHH
TGHLSHQIEHHLFPDVPARRYRQMAPKVEAVCKKYGLNYNNASLFKQYGQVLGRIVKYAF
HHHHHHHHHHHCCCCCCHHHHHHHCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHC
PFKK
CCCC
>Mature Secondary Structure
MNAPVKFEYFKNPKNRELTAVELEAFAKELDQIKQEVLDDIGEKDAKYIRRVYSAVRYSS
CCCCEEEHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
MLGRACLFAGWFPPAWILGTGLLGFSKIMENMELGHNVMHGQYDWMNDPKFNGQTYEWDT
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCEEECCC
VGTADNWRQTHNYKHHTYTNIKGIDDDIGYGLLRLFPEQRWKPGFLLQPIYSIPFCMLFQ
CCCCHHHHHHCCCCCCEECCCCCCCCHHHHHHHHHCHHHCCCCCCCCCHHHHHHHHHHHH
WGVAIQNLEIGKLIYKRKTWKQFKQECKPTQKKIGKQLFKDYVFFPLIAGPAALPVFTGN
HHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHEEHH
LVANGIRNAWTFSIIFCGHFTKDVEVFPKTVLQNETRGHWYMRQIRGSSNLTGSEAFHIL
HHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCHHHHHH
TGHLSHQIEHHLFPDVPARRYRQMAPKVEAVCKKYGLNYNNASLFKQYGQVLGRIVKYAF
HHHHHHHHHHHCCCCCCHHHHHHHCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHC
PFKK
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]