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The map label for this gene is dps

Identifier: 50084394

GI number: 50084394

Start: 1207197

End: 1207706

Strand: Reverse

Name: dps

Synonym: ACIAD1205

Alternate gene names: 50084394

Gene position: 1207706-1207197 (Counterclockwise)

Preceding gene: 50084395

Following gene: 50084386

Centisome position: 33.56

GC content: 39.02

Gene sequence:

>510_bases
ATGTCGAAATCTTCATCTAAACTATTAAAAGTCTATACCCGAAATAACCTTGATCCAGCGGTAAAAGAATCTACAGTTAA
AATTTTAAATCAGATTTTGGCCAATTTGATTGACCTCTCCCTTCTCACTAAGCAGGCCCACTGGAATATGCGAGGCAGTA
ACTTCATCGCAGTTCATGAAATGCTAGATACATTTAGAACATCATTGATTACCCATTTGGATAATGTTGCTGAGCGCGCT
GTGCAGATTGGTGGAACTGCATTGGGTACAACTCAAACTGTATCGACCACCTCTCAATTAAGTGCATATCCTGTCGAGAT
TCACAATGTGCAGGATCATCTTAAAGAGTTAGCAGATCGTTATGGTATCGTTGCCAATCATTTGCGTGACACGATTGAAG
AAATTCAAGACCCAATCTCTGAAGATATTATTCATGCCGCATTGGAAGATCTTGATCAATATTTATGGTTCCTGGAAGCC
AATATTGAACAAGACAAAACCACAGCTTAA

Upstream 100 bases:

>100_bases
AACTTTAACAACCTAAACAGGCAACGTGTGCTTCTTAATTTACTCTATTGTTTTAGTTTAAGACCAATTCCGGTTTTCTT
TATAACAACTAGAGGTTCTT

Downstream 100 bases:

>100_bases
ATTATTGGCTTCATTCATACATAAGAAACAAGGGAGGCATTTAGCCTCCCTTGTTTTTATATTATTTCTGTTACTTCAAA
TTAAGGCTTAACCACCACCA

Product: DNA starvation/stationary phase protection protein Dps

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 169; Mature: 168

Protein sequence:

>169_residues
MSKSSSKLLKVYTRNNLDPAVKESTVKILNQILANLIDLSLLTKQAHWNMRGSNFIAVHEMLDTFRTSLITHLDNVAERA
VQIGGTALGTTQTVSTTSQLSAYPVEIHNVQDHLKELADRYGIVANHLRDTIEEIQDPISEDIIHAALEDLDQYLWFLEA
NIEQDKTTA

Sequences:

>Translated_169_residues
MSKSSSKLLKVYTRNNLDPAVKESTVKILNQILANLIDLSLLTKQAHWNMRGSNFIAVHEMLDTFRTSLITHLDNVAERA
VQIGGTALGTTQTVSTTSQLSAYPVEIHNVQDHLKELADRYGIVANHLRDTIEEIQDPISEDIIHAALEDLDQYLWFLEA
NIEQDKTTA
>Mature_168_residues
SKSSSKLLKVYTRNNLDPAVKESTVKILNQILANLIDLSLLTKQAHWNMRGSNFIAVHEMLDTFRTSLITHLDNVAERAV
QIGGTALGTTQTVSTTSQLSAYPVEIHNVQDHLKELADRYGIVANHLRDTIEEIQDPISEDIIHAALEDLDQYLWFLEAN
IEQDKTTA

Specific function: During stationary phase, binds the chromosome non- specifically, forming a highly ordered and stable dps-DNA co- crystal within which chromosomal DNA is condensed and protected from diverse damages. It protects DNA from oxidative damage by sequestering in

COG id: COG0783

COG function: function code P; DNA-binding ferritin-like protein (oxidative damage protectant)

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dps family

Homologues:

Organism=Escherichia coli, GI1787032, Length=166, Percent_Identity=60.2409638554217, Blast_Score=212, Evalue=1e-56,

Paralogues:

None

Copy number: 6720 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): DPS_ACIAD (Q6FCX7)

Other databases:

- EMBL:   CR543861
- RefSeq:   YP_045904.1
- ProteinModelPortal:   Q6FCX7
- SMR:   Q6FCX7
- STRING:   Q6FCX7
- GeneID:   2879763
- GenomeReviews:   CR543861_GR
- KEGG:   aci:ACIAD1205
- NMPDR:   fig|62977.3.peg.225
- eggNOG:   COG0783
- HOGENOM:   HBG672882
- OMA:   KMDELMD
- PhylomeDB:   Q6FCX7
- ProtClustDB:   PRK09448
- BioCyc:   ASP62977:ACIAD1205-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_01441
- InterPro:   IPR002177
- InterPro:   IPR023188
- InterPro:   IPR023067
- InterPro:   IPR012347
- InterPro:   IPR009078
- InterPro:   IPR008331
- Gene3D:   G3DSA:1.20.1260.10
- PIRSF:   PIRSF005900
- PRINTS:   PR01346

Pfam domain/function: PF00210 Ferritin; SSF47240 Ferritin/RR_like

EC number: NA

Molecular weight: Translated: 18982; Mature: 18850

Theoretical pI: Translated: 4.99; Mature: 4.99

Prosite motif: PS00818 DPS_1; PS00819 DPS_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKSSSKLLKVYTRNNLDPAVKESTVKILNQILANLIDLSLLTKQAHWNMRGSNFIAVHE
CCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
MLDTFRTSLITHLDNVAERAVQIGGTALGTTQTVSTTSQLSAYPVEIHNVQDHLKELADR
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
YGIVANHLRDTIEEIQDPISEDIIHAALEDLDQYLWFLEANIEQDKTTA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
SKSSSKLLKVYTRNNLDPAVKESTVKILNQILANLIDLSLLTKQAHWNMRGSNFIAVHE
CCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
MLDTFRTSLITHLDNVAERAVQIGGTALGTTQTVSTTSQLSAYPVEIHNVQDHLKELADR
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
YGIVANHLRDTIEEIQDPISEDIIHAALEDLDQYLWFLEANIEQDKTTA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA