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The map label for this gene is ygfB [C]

Identifier: 50084319

GI number: 50084319

Start: 1112799

End: 1113431

Strand: Direct

Name: ygfB [C]

Synonym: ACIAD1125

Alternate gene names: 50084319

Gene position: 1112799-1113431 (Clockwise)

Preceding gene: 50084316

Following gene: 50084320

Centisome position: 30.92

GC content: 40.76

Gene sequence:

>633_bases
ATGCAAGACGATATTTCAGGTTGGAACGAGTGGAATCAAAATTTCAACGGTATTGAAGAAATTACAAGCCCAAGTGAGTT
ACATGGATTGGTAACCGGTATAGTTTGTGTGACAGAGCCACCATCAAGAGATGAATGGTTACAAATTTTAGCAACCTTAA
ATGTGCCGACTTTAAGCGATGCAGCTCTTTCGCTTTTAGGAGATGAAGCTGAAGATGTATCACACGCGTTATCTGAAGAT
GAATTGGACTATCTTCCAATTTTGCCAGATGATGAACATACCCTACAGGAACGGGTACAGGCACTGGCAGATTGGTGTGC
TGGTGTGGTTTTGGGCTTTGGATTGGCGTCGGGGCATATTCGATCAAACGAGATGGAGTTGATCGAACATCTTCAGGATG
TCGCAGCGGTTGAATTTGAAGATTCAGATGATGATGAAGATGGTGAAATCAGCTACCAAGAATTGTACGAATTTGTACGT
TTGATTCCTGTTAGCCTGTCGATTGGTCGTAAAAAGATAGCTGTCAGTGAAAGTACCTTATTGAGAAATTTTCAATCGAA
GCTTCAAAACAATAGTACATCAAATGAAAACCAGAGTATTGTTGAAATGTTTACACCACATCGTCCAAGCTAA

Upstream 100 bases:

>100_bases
AACATGCGCTTGTAGTCGCTGTAATTGTTCTAACATAACGTAGTCGCACAGAATTGCAATCAAAGGTAATATATACGAAG
TATAGAGATTGGATAAACGA

Downstream 100 bases:

>100_bases
GCTTGGGCGGTGTTTATCACACCGAATGACTTGATAACGAAATAGATAGACAAATAGCCTCATGAAATTGACTCAAGCTG
ATTTTGAACTACGCCGAGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 210; Mature: 210

Protein sequence:

>210_residues
MQDDISGWNEWNQNFNGIEEITSPSELHGLVTGIVCVTEPPSRDEWLQILATLNVPTLSDAALSLLGDEAEDVSHALSED
ELDYLPILPDDEHTLQERVQALADWCAGVVLGFGLASGHIRSNEMELIEHLQDVAAVEFEDSDDDEDGEISYQELYEFVR
LIPVSLSIGRKKIAVSESTLLRNFQSKLQNNSTSNENQSIVEMFTPHRPS

Sequences:

>Translated_210_residues
MQDDISGWNEWNQNFNGIEEITSPSELHGLVTGIVCVTEPPSRDEWLQILATLNVPTLSDAALSLLGDEAEDVSHALSED
ELDYLPILPDDEHTLQERVQALADWCAGVVLGFGLASGHIRSNEMELIEHLQDVAAVEFEDSDDDEDGEISYQELYEFVR
LIPVSLSIGRKKIAVSESTLLRNFQSKLQNNSTSNENQSIVEMFTPHRPS
>Mature_210_residues
MQDDISGWNEWNQNFNGIEEITSPSELHGLVTGIVCVTEPPSRDEWLQILATLNVPTLSDAALSLLGDEAEDVSHALSED
ELDYLPILPDDEHTLQERVQALADWCAGVVLGFGLASGHIRSNEMELIEHLQDVAAVEFEDSDDDEDGEISYQELYEFVR
LIPVSLSIGRKKIAVSESTLLRNFQSKLQNNSTSNENQSIVEMFTPHRPS

Specific function: Unknown

COG id: COG3079

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0149 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011978 [H]

Pfam domain/function: PF03695 UPF0149 [H]

EC number: NA

Molecular weight: Translated: 23409; Mature: 23409

Theoretical pI: Translated: 3.84; Mature: 3.84

Prosite motif: PS00018 EF_HAND_1 ; PS50222 EF_HAND_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQDDISGWNEWNQNFNGIEEITSPSELHGLVTGIVCVTEPPSRDEWLQILATLNVPTLSD
CCCCCCCHHHHCCCCCCHHHHCCHHHHHHHHHHEEEECCCCCHHHHHHHHHHCCCCCHHH
AALSLLGDEAEDVSHALSEDELDYLPILPDDEHTLQERVQALADWCAGVVLGFGLASGHI
HHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
RSNEMELIEHLQDVAAVEFEDSDDDEDGEISYQELYEFVRLIPVSLSIGRKKIAVSESTL
CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
LRNFQSKLQNNSTSNENQSIVEMFTPHRPS
HHHHHHHHHCCCCCCCCHHHHHHHCCCCCC
>Mature Secondary Structure
MQDDISGWNEWNQNFNGIEEITSPSELHGLVTGIVCVTEPPSRDEWLQILATLNVPTLSD
CCCCCCCHHHHCCCCCCHHHHCCHHHHHHHHHHEEEECCCCCHHHHHHHHHHCCCCCHHH
AALSLLGDEAEDVSHALSEDELDYLPILPDDEHTLQERVQALADWCAGVVLGFGLASGHI
HHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
RSNEMELIEHLQDVAAVEFEDSDDDEDGEISYQELYEFVRLIPVSLSIGRKKIAVSESTL
CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
LRNFQSKLQNNSTSNENQSIVEMFTPHRPS
HHHHHHHHHCCCCCCCCHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA